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  • Open Life Science

    1 January - 22 April 2020

    Open Life Science https://tess.elixir-europe.org/events/open-life-science The Open Life Science program helps **early stage researchers and potential academic leaders** in becoming **Open Science ambassadors**. Any questions? We are here to help - feel free to email [hello@openlifesci.org](mailto:hello@openlifesci.org) or connect with us on Twitter [@openlifesci](https://twitter.com/openlifesci). ## About This is a **15-week long personal mentorship and cohort-based training**, where participants (organisers, hosts, mentors and mentees) of this program will: - share their expertise and gain knowledge essential to create, lead, and sustain an Open Science project - connect with members across different projects, communities, backgrounds, and identities - empower each other to become effective Open Science ambassadors in their communities We are recruiting for our first cohort of mentees for the first round that starts in January 2020. We are also inviting mentors, experts and content developers to join us in shaping this program. ## Projects Participants will join this program with a project that they either are already working on or want to develop during this program. Your project ideas can range from solving technical questions, to creating an open data project or report, developing open source software project, writing open publication, facilitating community/team culture movements, advancing open educational resource or contributing to other existing projects/community. All applications are welcome, whether your project is just an idea at this stage, or something that is running for years, but, your projects must: - promote one or several [Open Science practices](https://www.fosteropenscience.eu/content/what-open-science-introduction) (i.e. Open Access, Open Source, Citizen Science, ) in life science - state a possible measurable outcome (i.e. feature, module, or minimum viable product) from this program - create an inclusive space and welcome contributions from their community members ### Why focus on life science? Modern life science and related communities stand in the interface of computational and biological research. This position provides an exciting opportunity for new scientists to understand and welcome "open by design" practices. We understand that our curriculum is applicable to various fields, but we want to focus on life science community/projects with this program due to an urgent need to promote open practices in this field. If you have a project idea that is not directly related to life science, we will ask you to describe how you aim to advance openness in life science through your work. ### What's in it for you? We want to make this program mutually beneficial for all the participants. Here are a few values we think you will receive from participating in this project. - Become a contributing member of this community - Collaborate with others in Open Science projects - Exchange skills with others and build your own profiles - Highlight and promote your resources - Gain insights from other experts in the field - Work on a short-term projects and publish online - Get recognition and acknowledgement for your work - Co-develop this program by sharing feedback ## Timeline ## The program itself *To illustrate the program, we will share the persona/story of Joy, a mentee participating in the program, and Sam, their personal mentor, as they progress through their open science journey.* In their applications, they will indicate their interests in the topics related to Open Science in bioinformatics. Joy will provide a short outline of their project, and Sam will list their expertise that they want to share with their mentee. After the selection process, they will be involved in the following steps of this program: 1. Based on their common interests, they will be introduced to each other as suitable mentee and mentor They will meet every 2 weeks. In these **mentee-mentor calls** (around 30 minutes), Sam will help Joy evaluate their understanding of the new topics, and review their progress by providing constructive feedback. Joy will be given relevant exercises before these calls to help them apply new skills in their project. When needed, Joy and Sam will be able to connect with other [experts](about#experts) and get consulted on their project. 2. Joy will participate to online calls where relevant contents related to Open Life Science is shared and discussed with all participants of the program. In these **cohort calls**, the program leaders will introduce new topics and resources, facilitate break-out discussions, and invite experts from the field to give talks. In the first call Joy will get to know all the participants of the program, present their project, learn about others' projects. A final cohort call will allow Joy to present their project to other participants and exchange values. 3. Sam will participate to **mentoring training** with topic-based discussions with other mentors aimed at enhancing their mentoring skills. After the 15 weeks of the program, a self-evaluation survey will help Joy and Sam in positioning their knowledge in open science leadership before and after the program. For the next round, Joy may share what they learnt by mentoring a project and Sam continue their mentor effort and/or become an expert ## Applications This program will focus on Open Science in the life sciences and bioinformatics domains. We are particularly keen to connect with the participants from less-represented European countries such as Hungary, Greece, Estonia, and Cyprus. We also invite applicants from outside Europe, particularly from developing countries (e.g. India and Africa - who are also timezone-compatible). Cohort calls will be conducted in English. However, our participants who have different primary languages such as Spanish, French, German, Hindi, and Portuguese, will be paired with mentors who can communicate in their preferred languages. 2020-01-01 09:00:00 UTC 2020-04-22 17:00:00 UTC Open Life Science Bioinformatics Biology [] hello@openlifesci.org [] PhD studentsLife Science ResearchersBioinformaticians and wet-lab biologistsresearch software engineers and research data managers working with ELIXIR-supported tools and resources workshops_and_courses registration_of_interest openlifesciolsopen sourceopen accessOpen scienceopen datapreprints
  • eLife Innovation Leaders 2020

    1 February - 30 June 2020

    eLife Innovation Leaders 2020 https://tess.elixir-europe.org/events/elife-innovation-leaders-2020 *eLife Innovation Leaders* is a 14-week mentorship and open leadership training programme designed for innovators developing open-source tools and projects for open research communication. Key takeaways: - A personalised experience with one-on-one mentorship - A shared co-learning journey - Theory and practice in project design, community engagement, and more - Opportunities to be supported beyond the programme The programme will take place between February and June 2020. We invite you to find out more and apply by December 8 here: [elifesci.org/innovationleaders](https://elifesci.org/innovationleaders) If you have any specific requirements to enable your participation, please don't hesitate to let us know through the application form or through email, we're happy to discuss potential arrangements. 2020-02-01 09:00:00 UTC 2020-06-30 23:59:00 UTC Emmy Tsang, Innovation Community Manager @ eLife [] Emmy at innovation [at] elifesciences [dot] org [] research software engineers and research data managers working with ELIXIR-supported tools and resourcestool authorssoftware developers, bioinformaticians workshops_and_courses [] Open scienceopen sourceCommunication
  • R for data science

    31 March - 3 April 2020

    Liverpool, United Kingdom

    R for data science https://tess.elixir-europe.org/events/r-for-data-science The course covered content for these learning objectives: To write your own custom functions To use for loops, apply functions and if statements To analyse large matrices of data in a semi-automated way To normalise data To quantify and correct batch effect To undertake the most common clustering algorithms including k-means and hierarchical To perform variable selection and present these results in different plots including heatmaps To do 2-way ANOVA To undertake multivariate modelling A brief introduction to machine learning. The course included brief theoretical introductions followed by hands on exercises based on real life research examples. 2020-03-31 09:00:00 UTC 2020-04-03 17:00:00 UTC Computational Biology Facility University of Liverpool, Liverpool, United Kingdom University of Liverpool Liverpool Merseyside United Kingdom L69 3GH Statistics and probability Bioinformatics University of Liverpool Computational Biology Facility (cbf@liverpool.ac.uk) [] [] 20 workshops_and_courses registration_of_interest R ProgrammingStatistical-model Statistics Pre-processingTranscriptomicsMetabolomicsProteomics
  • Introduction to Bioinformatics using NGS data (NBIS/SciLifeLab course)

    20 - 25 April 2020

    Linköping, Sweden

    Elixir node event
    Introduction to Bioinformatics using NGS data (NBIS/SciLifeLab course) https://tess.elixir-europe.org/events/introduction-to-bioinformatics-using-ngs-data-nbis-scilifelab-course-da3ee285-ab25-41b7-968a-8f55dc609239 #training #url: https://www.scilifelab.se/events/introduction-to-bioinformatics-using-ngs-data-linkoping/   Important dates Application open Application deadline: March 12, 2020 Confirmation to accepted participants: March 17, 2020 2020-04-20 09:00:00 UTC 2020-04-25 00:00:00 UTC Linköping, Sweden Linköping Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • Introduction to biostatistics and machine learning (NBIS course) (CANCELLED)

    11 - 16 May 2020

    Uppsala, Sweden

    Elixir node event
    Introduction to biostatistics and machine learning (NBIS course) (CANCELLED) https://tess.elixir-europe.org/events/introduction-to-biostatistics-and-machine-learning-nbis-course #training #url: https://www.scilifelab.se/events/introduction-to-biostatistics-and-machine-learning/ email: edu.ml-biostatistics@nbis.se Due to the current Covid-19 situation the NBIS training events for spring 2020 has been cancelled.  The event "Introduction to biostatistics and machine learning" is postponed to week 47.  2020-05-11 09:00:00 UTC 2020-05-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • RaukR, Advanced R for Bioinformatics, Summer course (NBIS course)

    7 - 19 June 2020

    Visby, Sweden

    Elixir node event
    RaukR, Advanced R for Bioinformatics, Summer course (NBIS course) https://tess.elixir-europe.org/events/raukr-advanced-r-for-bioinformatics-summer-course-nbis-course #training #url: https://www.scilifelab.se/events/raukr-advanced-r-for-bioinformatics-summer-course-2/  Important dates  Application deadline: April 3rd, 2020 Notification of acceptance/decline: April 17th, 2020 email: raukr@nbis.se course leaders: Marcin Kierzcak and Sebastian DiLorenzo 2020-06-07 09:00:00 UTC 2020-06-19 00:00:00 UTC Visby, Sweden Visby Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining

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