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  • Metabolomics Data Processing and Data Analysis

    12 October - 6 November 2020

    Elixir node event
    Metabolomics Data Processing and Data Analysis https://tess.elixir-europe.org/events/metabolomics-data-processing-and-data-analysis-3855a7d7-cf12-44e8-8d22-d6c252487ce0 This online course explores the tools and approaches that are used to process and analyse metabolomics data. You will investigate the challenges that are typically encountered in the analysis of metabolomics data, and provide solutions to overcome these problems. The materials in this course are delivered via the FutureLearn platform over a four week period, with an estimated learning time of four hours per week. Each week you will work through a number of steps to complete the learning material. A step may include a short video, an article, an exercise with step-by-step instructions, a test or a discussion to interact with your peer or the educators. All of the course material is uploaded to the FutureLearn platform so that you can complete the steps at a convenient time for you. We (the educators) support your learning via social discussions where you will be able post questions and comments to the team of educators and the other learners on the course throughout the 4 weeks. In the final week of the course there is a live question and answer session with the entire team of educators. You will be provided with information to join the question and answer session via the FutureLearn platform and you can post questions in advance. The question and answer session will be recorded and a video uploaded to the FutureLearn platform. If you do not have time to complete the course during the 4-week period you will retain access to the course material to revisit, as you are able. 2020-10-12 09:00:00 UTC 2020-11-06 23:59:00 UTC Birmingham Metabolomics Training Centre Bioinformatics Metabolomics University of Birmingham bmtc@contacts.bham.ac.uk [] ScientistsPhD studentsMaster students workshops_and_coursesmeetings_and_conferences [] MetabolomicsData processingData analysis
  • NBIS Course Umeå: Python programming with applications to bioinformatics, Umeå

    19 - 24 October 2020

    Glasburen

    Elixir node event
    NBIS Course Umeå: Python programming with applications to bioinformatics, Umeå https://tess.elixir-europe.org/events/nbis-course-umea-python-programming-with-applications-to-bioinformatics-umea-2dee9df0-cf81-4e7d-b14e-1dd65909a0fa #training TBA edu.intro-python@nbis.se or education@nbis.se Course leaders: Nina Norgren and Malin Klang 2020-10-19 09:00:00 UTC 2020-10-24 00:00:00 UTC Glasburen Glasburen [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • NBIS Course Uppsala: Python programming with applications to bioinformatics

    19 - 24 October 2020

    Uppsala, Sweden

    Elixir node event
    NBIS Course Uppsala: Python programming with applications to bioinformatics https://tess.elixir-europe.org/events/nbis-course-uppsala-python-programming-with-applications-to-bioinformatics #training TBA edu.intro-python@nbis.se or education@nbis.se Course leaders: Nina Norgren and Malin Klang 2020-10-19 09:00:00 UTC 2020-10-24 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • NBIS Course Uppsala: Python programming with applications to bioinformatics

    19 - 24 October 2020

    Uppsala, Sweden

    Elixir node event
    NBIS Course Uppsala: Python programming with applications to bioinformatics https://tess.elixir-europe.org/events/nbis-course-uppsala-python-programming-with-applications-to-bioinformatics-6f01780c-fd8b-411e-8c7c-95250e6bb979 #training #url: https://www.scilifelab.se/event/python-programming-with-applications-to-bioinformatics-uppsala-2 email: edu.intro-python@nbis.se  2020-10-19 09:00:00 UTC 2020-10-24 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • NBIS Course Umeå: Python programming with applications to bioinformatics, Umeå

    19 - 24 October 2020

    Glasburen

    Elixir node event
    NBIS Course Umeå: Python programming with applications to bioinformatics, Umeå https://tess.elixir-europe.org/events/nbis-course-umea-python-programming-with-applications-to-bioinformatics-umea-907bf717-7d0a-48d3-b284-1d050de6358d #training #url: https://www.scilifelab.se/event/python-programming-with-applications-to-bioinformatics-umea-2 email: edu.intro-python@nbis.se   2020-10-19 09:00:00 UTC 2020-10-24 00:00:00 UTC Glasburen Glasburen [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • ELIXIR CZ Artificial Intelligence in Life Sciences I

    26 - 27 October 2020

    Prague, Czechia

    Elixir node event
    ELIXIR CZ Artificial Intelligence in Life Sciences I https://tess.elixir-europe.org/events/elixir-cz-artificial-intelligence-in-life-sciences-i This workshop will provide a basic introduction to machine learning and its application in Life Sciences, with a special focus on molecular and cell biology. Data-driven approaches penetrate various scientific disciplines, including the fields of biology, biochemistry and biotechnology. Novel technologies of high-throughput data collection and advanced data analysis, such as deep neural networks, offer exceptional opportunities for the development of very complex and accurate mathematical models. The theoretical lectures will cover main methods, algorithms and technologies, illustrate their use in biology and biochemistry research using real-life examples. Hands-on practicals will provide participants with essential skills for the application of machine learning methods and software tools for solving problems in Life Sciences. We plan to continue in our effort to organize follow-ups of this meeting and focus on challenging issues in life science disciplines approachable by AI technology. 2020-10-26 11:00:00 UTC 2020-10-27 14:00:00 UTC ELIXIR CZ, IOCB, FNUSA – ICRC, University of West Bohemia Flemingovo nám. 542, 542, Flemingovo náměstí, Prague, Czechia Flemingovo nám. 542, 542, Flemingovo náměstí Prague Hlavní město Praha Czechia 166 10 [] https://www.elixir-czech.cz/events/elixir-cz-artificial-intelligence-in-life-sciences-oct-2020 [] [] 75 workshops_and_courses first_come_first_served Artificial Intelligencemachine learningDrug design
  • GDPR and training

    28 October 2020

    GDPR and training https://tess.elixir-europe.org/events/gdpr-and-training The OpenAIRE Community of Practice for Training coordinators invites you to join this 1.5 hour-long webinar and collaborative writing sprint on organizing GDPR compliant online events. Prodromos Tsiavos (Legal Adviser of "Athena" Research & Innovation Center and OpenAIRE) will provide good practice advice and Walter Scholger (Zentrum für Informationsmodellierung, Austrian Centre for Digital Humanities, Universität Graz) will talk about the Consent Form Wizard https://consent.dariah.eu/ followed by discussions on how to make sure that GDPR requirements are properly addressed and personal data is protected. It will cover best practices for online event organisation, including pre- and post-event (registration, carrying out, evaluation, etc.). It will also address the following aspects: how to inform correctly about a session recording and how to make the recordings available (e.g. with public chat messages, etc.), good practices on making collaborative documents (developed at online sessions) publicly available, issues to consider during large online events, how to optimize the online events workflows, whether national differences in Europe play a big role, etc. Plain language templates and checklists will be created in breakout group writing sprints and shared with a wider training community. The following good practice recommendations will be developed during the writing sprints: - Template/s: plain language wording for online registration forms (disclaimers, permissions, notice that consent could be withdrawn any time) and good practices for online events registration - e.g. a host organization manages registration on its website and has full control of data and a way to safely manage it, etc. - Wording suggestions for recording announcements, disclaimers and permissions (e.g. what will be captured - video, webcam footage, audio, text chat messages and displayed username; inform participants on how to anonymize themselves - change names, blur video, etc; is the participant’s consent needed - in writing - accept and continue at registration or verbal expression is sufficient, etc.) - Template/plain language wording to deal with personal data in evaluation/feedback forms. GDPR friendly tools and checklists for making online session materials publicly available - recording, collaborative documents, etc. - Checklists/workflows for running online events: e.g. event access under password (not a direct link). - Checklists/workflows for keeping online events documentation, registration and recording: e.g. beware of not keeping backups with actual names and email addresses; anonymize before backing up and storing, secure storage (encrypted?), etc. - Retention period: for how long the data could/should be kept and when it will be deleted, etc. 2020-10-28 14:00:00 UTC 2020-10-28 15:30:00 UTC The OpenAIRE Community of Practice for Training coordinators [] iryna.kuchma@eifl.net [] [] workshops_and_courses [] GDPRtraining
  • WEBINAR: Galaxy Australia: enabling online data analysis for the research community

    4 November 2020

    WEBINAR: Galaxy Australia: enabling online data analysis for the research community https://tess.elixir-europe.org/events/webinar-galaxy-australia-enabling-online-data-analysis-for-the-research-community Galaxy is your ultimate research buddy - an online platform for biological research that gives you access to computational data analysis tools and workflows without the need for programming experience. It is supported by a rich collection of training materials and an active community of scientists. In this webinar we explore how Galaxy can transform your research through access to high performance computing power coupled with open, reproducible computational workflows and support from the Galaxy community. We’ll look at real-life examples of how Galaxy workflows are being applied to integrative meta-omics of microbial communities and how Galaxy is being leveraged to address the global challenges of COVID-19 research. Presenters: Dr Gareth Price, Service Manager, Galaxy Australia & Dr Johan Gustafsson, Bioinformatics Engagement Officer, Australian BioCommons Who the webinar is for: This webinar is suitable for life-science researchers. No prior knowledge of Galaxy or programming is required. 2020-11-04 13:00:00 UTC 2020-11-04 14:00:00 UTC Australian BioCommons Omics Bioinformatics [] [] Life Science Researchers workshops_and_courses first_come_first_served Data analysislife sciencesbioinformatics
  • WORKSHOP: Online data analysis for biologists - November 2020

    12 November 2020

    WORKSHOP: Online data analysis for biologists - November 2020 https://tess.elixir-europe.org/events/workshop-online-data-analysis-for-biologists-november-2020 Galaxy is an online platform for biological research that allows people to use computational data analysis tools and workflows without the need for programming experience. It is an open source, web-based platform for accessible, reproducible, and transparent computational biomedical research. It also captures run information so that workflows can be saved, repeated and shared efficiently via the web. This interactive beginners workshop will provide an introduction to the Galaxy interface, histories and available tools. The material covered in this workshop is freely available through the Galaxy Training Network. 2020-11-12 14:00:00 UTC 2020-11-12 17:00:00 UTC Australian BioCommons Australia, Australia Australia Australia Bioinformatics [] [] Biologists workshops_and_courses [] GalaxyData analysislifescience
  • NBIS course Uppsala: Introduction to biostatistics and machine learning

    16 - 21 November 2020

    Uppsala, Sweden

    Elixir node event
    NBIS course Uppsala: Introduction to biostatistics and machine learning https://tess.elixir-europe.org/events/introduction-to-biostatistics-and-machine-learning-nbis-course-ddcd25d4-da18-41a5-97cd-8ac0ea487f95 #training #url: https://www.scilifelab.se/events/introduction-to-biostatistics-and-machine-learning/   email: edu.ml-biostatistics@nbis.se Important dates Application closes: 2020-09-14 Confirmation to accepted students:  2020-09-18 2020-11-16 09:00:00 UTC 2020-11-21 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • Introduction to Data Management Practices

    1 - 4 December 2020

    Uppsala University

    Elixir node event
    Introduction to Data Management Practices https://tess.elixir-europe.org/events/introduction-to-data-management-practices-3e7da179-219f-4d89-b659-1566d1c02db4 #training #url:https://nbisweden.github.io/workshop-dm-practices/ Introduction to Data Management Practices National course open for PhD students, postdocs, researchers and other employees within all Swedish universities. The course is geared towards life scientists wanting to take the first steps towards a more systematic and reproducible approach to analysing and managing research data. 2020-12-01 09:00:00 UTC 2020-12-04 00:00:00 UTC Uppsala University Uppsala University [] Niclas Jareborg - niclas.jareborg@scilifelab.se [] [] [] [] #trainingtraining

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