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  • DNA Methylation Data Analysis Workshop

    2 - 5 November 2020

    Berlin, Germany

    DNA Methylation Data Analysis Workshop https://tess.elixir-europe.org/events/dna-methylation-data-analysis-workshop Advance your epigenetics research with NGS methods. In a nutshell - Learn how bisulfite sequencing works - Understand how bisulfite-treated reads are mapped to a reference genome - Perform basic analyses (call methylated regions, perform basic downstream analyses) - Use shell scripting to create reusable data pipelines - Visualize results (ready-to-publish) The purpose of this workshop is to get a deeper understanding of the use of bisulfite-treated DNA in order to analyze the epigenetic layer of DNA methylation. Advantages and disadvantages of the so-called 'bisulfite sequencing' and its implications on data analyses will be covered. The participants will be trained to understand bisulfite-treated NGS data, to detect potential problems/errors and finally to implement their own pipelines. After this course they will be able to analyze DNA methylation and create ready-to-publish graphics. By the end of this workshop the participants will: - be familiar with the sequencing method of Illumina - understand how bisulfite sequencing works - be aware of the mapping problem of bisulfite-treated data - understand how bisulfite-treated reads are mapped to a reference genome - be familiar with common data formats and standards - know relevant tools for data processing - automate tasks with shell scripting to create reusable data pipelines - perform basic analyses (call methylated regions, perform basic downstream analyses) - plot and visualize results (ready-to-publish) - be able to reuse all analyses 2020-11-02 09:00:00 UTC 2020-11-05 17:00:00 UTC ecSeq Bioinformatics GmbH PC-COLLEGE Berlin, 78, Stresemannstraße, Berlin, Germany PC-COLLEGE Berlin, 78, Stresemannstraße Berlin Germany 10963 Sequencing Sequence analysis Bioinformatics [] ecSeq Bioinformatics GmbH Sternwartenstr. 29 D-04103 Leipzig Germany Email: events@ecSeq.com [] BiologistsBiologists, Genomicists, Computer ScientistsMolecular BiologistsPhD studentspost-docsPathologistsbioinformaticians 25 workshops_and_courses first_come_first_served EpigeneticsDNA MethylationBisulfite-Seq
  • Genome Engineering and Synthetic Biology (4th edition)

    23 - 24 September 2021

    Gent, Belgium

    Elixir node event
    Genome Engineering and Synthetic Biology (4th edition) https://tess.elixir-europe.org/events/genome-engineering-and-synthetic-biology-4th-edition Genome Engineering and Synthetic Biology are revolutionizing Life Sciences. Driven by advances in the CRISPR-toolbox for rapid, cheap, multiplex modification of genomes and breakthroughs in DNA synthesis technologies, the pace of progress enabled by these tools in the last years has been breathtaking. The first three editions (September 2013, January 2016, January 2018) were a roaring success and we are pleased to announce the 4th edition of GESB in beautiful Ghent in September, 2020. Travel Grants We offer 5 travel grants to international attendees, which will reimburse travel costs up to 400 Euros. Are you interested in attending GESB20 and want to have a chance on a travel grant? Submit your motivation below by clicking on the 'Apply for a grant' button before 24 June 2021. The organizing committee will notify you of your travel grant acceptance by the end of June. No registration is needed before submitting a travel grant proposal. When you’re awarded with a travel grant you will receive a practical email containing the next steps. Note that being awarded a travel grant does not mean being registered for the conference. Poster information: Format: A0 (841 x 1189 mm / 33.1 x 46.8 in), portrait orientation Deadlines: • Early Bird: 30 July 2020 • Late Registration: 26 August 2020 • Abstract deadline: 2 July 2020 Speakers: • Edward Lemke - Institute of Molecular Biology (IMB), DE, Johannes Gutenberg University (JGU), DE & EMBL, DE • Sarah Christine Heilshorn - Stanford University, US • Jane Langdale - University of Oxford, UK • George Guo-Qiang Chen - Tsinghua University, CN • Jason Gammack - Inscripta, US • Janice Chen - Mammoth Biosciences, US • Dan Voytas - University of Minnesota, US & Co-Founder & CSO, Calyxt, US • Alexis Komor - University of California, US • Fred Van Ex - Inari Agriculture, BE • Ross Sozzani - NC State Univeristy, US • Bruno Correia - EPFL, CH • Patrick Yizhi Cai - Manchester Institute of Biotechnology, University of Manchester, UK • Tilmann Buerckstuemmer - Aelian Biotechnology, AT • Peter Smibert - New York Genome Center, Techn Innovation lab, US • Tara Deans - University of Utah, US • Jonathan Gootenberg - McGovern Institute, MIT, US • Steve Harvey - CEO Camena Biosciences, UK • Rob Marchmont - VP Sphere Fluidics, UK • Charlie Silver - CEO Mission Bio, US • Bryan Dickinson - The University of Chicago, US • Holger Puchta - Botanical Institute, Karlsruhe Institute of Technology (KIT), DE • Ping-Wei Ho - VIB-KU Leuven Center for Microbiology, BE • And more to come! 2021-09-23 08:00:00 UTC 2021-09-24 18:00:00 UTC VIB De Bijloke, Bijlokekaai 7, 7, Bijlokekaai, Gent, Belgium De Bijloke, Bijlokekaai 7, 7, Bijlokekaai Gent Oost-Vlaanderen Belgium 9000 [] VIB Conferences team - +32(0)92446611 - conferences@vib.be TakaraTwist Bioscience IndustryPhD studentsAcademics 400 meetings_and_conferences [] genome engineeringSynthetic biologycrisprdna synthetistechnologies

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