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  • Bootcamp for Bioinformaticians

    6 November 2013

    Norwich, United Kingdom

    Bootcamp for Bioinformaticians https://tess.elixir-europe.org/events/bootcamp-for-bioinformaticians 2013-11-06 00:00:00 UTC 2013-11-06 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • TGAC Software Carpentry Bootcamp

    3 - 4 February 2014

    Norwich, United Kingdom

    TGAC Software Carpentry Bootcamp https://tess.elixir-europe.org/events/tgac-software-carpentry-bootcamp 2014-02-03 00:00:00 UTC 2014-02-04 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • De novo Assembly

    3 - 6 March 2014

    Norwich, United Kingdom

    De novo Assembly https://tess.elixir-europe.org/events/de-novo-assembly 2014-03-03 00:00:00 UTC 2014-03-06 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • SeqAhead: NGS current challenges and data analysis for plant researchers

    19 - 23 May 2014

    Norwich, United Kingdom

    SeqAhead: NGS current challenges and data analysis for plant researchers https://tess.elixir-europe.org/events/seqahead-ngs-current-challenges-and-data-analysis-for-plant-researchers 2014-05-19 01:00:00 UTC 2014-05-23 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • TGAC Summer School: A walk through Bioinformatics

    2 - 6 June 2014

    Norwich, United Kingdom

    TGAC Summer School: A walk through Bioinformatics https://tess.elixir-europe.org/events/tgac-summer-school-a-walk-through-bioinformatics 2014-06-02 01:00:00 UTC 2014-06-06 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • Metagenomics: From bench to data analysis

    8 - 12 September 2014

    Norwich, United Kingdom

    Metagenomics: From bench to data analysis https://tess.elixir-europe.org/events/metagenomics-from-bench-to-data-analysis-c1e58d99-e86f-40ca-9a4a-c86a6b54b57d 2014-09-08 01:00:00 UTC 2014-09-12 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH [] [] [] workshops_and_courses [] TGACbioinformatics
  • Training School: genotyping by sequencing

    3 - 7 November 2014

    Norwich, United Kingdom

    Training School: genotyping by sequencing https://tess.elixir-europe.org/events/training-school-genotyping-by-sequencing 2014-11-03 00:00:00 UTC 2014-11-07 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • Metagenomics: From bench to data analysis

    12 - 16 October 2015

    Norwich, United Kingdom

    Metagenomics: From bench to data analysis https://tess.elixir-europe.org/events/metagenomics-from-bench-to-data-analysis 2015-10-12 01:00:00 UTC 2015-10-16 01:00:00 UTC TGAC TGAC, Norwich, United Kingdom TGAC Norwich United Kingdom NR4 7UH Metagenomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • Genome assembly and annotation course

    12 - 14 October 2016

    Prague, Czechia

    Elixir node event
    Genome assembly and annotation course https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course ELIXIR Genome assembly and annotation course, Oct 12-14 2016 at the IOCB, Prague, Czech Republic 2016-10-12 09:00:00 UTC 2016-10-14 17:00:00 UTC ELIXIR CZ, IOCB Prague Institute of Organic Chemistry and Biochemistry AS CR, 2, Flemingovo náměstí, Prague, Czechia Institute of Organic Chemistry and Biochemistry AS CR, 2, Flemingovo náměstí Prague Hlavní město Praha Czechia Genomics IOCB Prague [] life scientistsResearchersPhD students workshops_and_courses registration_of_interest genomicsassemblytrainingeLearningEeLP
  • RNA-seq data analysis using Chipster

    31 January 2017

    Elixir node event
    RNA-seq data analysis using Chipster https://tess.elixir-europe.org/events/rna-seq-data-analysis-using-chipster ELIXIR tutorial “RNA-seq data analysis using Chipster”, Jan 31, 2017 2017-01-31 09:00:00 UTC 2017-01-31 17:00:00 UTC IOCB Prague, University of Ljubljana, Faculty of Medicine, ELIXIR-FI Transcriptomics Genomics IOCB PragueUniversity of Ljubljana, Faculty of Medicine [] Researchers workshops_and_courses registration_of_interest transcriptomics RNA-SeqeLearningEeLP
  • Introduction to High Performance Computing

    3 May 2017

    Carlton, Australia

    Introduction to High Performance Computing https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-b382ec6e-3021-45a5-8d2c-9d29f298f5c0 Using High Performance Computing (HPC) resources such as Melbourne Bioinformatics in an effective and efficient manner is key to modern research. This workshop will introduce you to HPC environments and assist you to get on with your research. 2017-05-03 13:30:00 UTC 2017-05-03 16:30:00 UTC Melbourne Bioinformatics Melbourne Bioinformatics, Lab-14, 700 Swanston St, , Carlton, Australia Melbourne Bioinformatics, Lab-14, 700 Swanston St, Carlton Australia Computer science University of Melbourne [] [] workshops_and_courses [] bioinformatics
  • Introduction to Galaxy and the Genomics Virtual Laboratory

    4 May 2017

    Carlton, Australia

    Introduction to Galaxy and the Genomics Virtual Laboratory https://tess.elixir-europe.org/events/introduction-to-galaxy-and-the-genomics-virtual-laboratory Galaxy is an open source, web-based platform for accessible, reproducible, and transparent computational biomedical research. It allows users without programming experience to easily specify parameters and run individual tools as well as larger workflows. It also captures run information so that any user can repeat and understand a complete computational analysis. Finally, it allows users to share and publish analyses via the web. This beginners workshop will introduce Galaxy’s interface, tool use, histories, and workflows and get new users of the Genomics Virtual Laboratory up and running. 2017-05-04 09:30:00 UTC 2017-05-04 12:30:00 UTC Melbourne Bioinformatics Melbourne Bioinformatics, Lab-14, 700 Swanston St, Carlton, Australia Melbourne Bioinformatics, Lab-14, 700 Swanston St Carlton Australia Bioinformatics University of Melbourne [] [] workshops_and_courses [] genomics
  • Bioinformatics for Molecular Biologists (4-day course)

    29 May - 2 June 2017

    Alcobendas, Spain

    Bioinformatics for Molecular Biologists (4-day course) https://tess.elixir-europe.org/events/bioinformatics-for-molecular-biologists-4-day-course-56d73c61-6703-4c8f-b7c7-91a8ec441a91 Over 4 days you will explore the open source world associated to bioinformatics with our experts. You will be introduced with various topics, from the basics of Linux, to widely used programming languages such as Perl™ and Python™ and the world’s most popular open source database MySQL™. A well balanced combination of lectures and practical sessions will reinforce new learning progressively building momentum towards a practical project where the newly acquired knowledge will be applied. New powerful options will be introduced to give you more confidence when handling large datasets. Ultimately, you will discover what’s beyond rigid user interfaces and apply your learning with real data. • Manage your own database (create your knowledge base). Free yourself from spreadsheets! • Personalise your analysis beyond options. Available in Torrent Browser or Ion Reporter™ software •Parse your VCF (extract information from flat files). Compare different samples and find the most common variants 2017-05-29 13:04:00 UTC 2017-06-02 13:04:00 UTC Thermo Fisher Scientific Avenida de la Vega, 1, Alcobendas, Spain Avenida de la Vega, 1 Alcobendas Madrid Spain 28108 [] learn-europe@thermofisher.com [] [] 6 [] first_come_first_served bioinformaticsPython for Biologistslinuxperl
  • At The Forefront Of Plant Research

    15 - 16 June 2017

    Gent, Belgium

    Elixir node event
    At The Forefront Of Plant Research https://tess.elixir-europe.org/events/at-the-forefront-of-plant-research Understanding and exploiting plant life lies at the heart of human civilization. Not only do we rely on plants to feed a growing world population and to improve our standard of living, plants also play a pivotal role in providing a significant portion of our energy needs, and in fulfilling our demand for renewable industrial resources. It is expected that technological advances will further boost crop productivity and quality in a wider range of applications. In addition, new technologies will enable the development of agricultural practices that are in better harmony with the natural environment. The genomics revolution has been steering plant life sciences for more than a decade now. For that reason it is good to reflect and look ahead to which new opportunities are on the horizon. The aim of this conference is to unite leaders from a wide range of pioneering research topics, to give us a glimpse of where plant science will lead us to in the coming decade. 2017-06-15 08:00:00 UTC 2017-06-16 18:00:00 UTC VIB Conferences NV Zebrastraat, 32, Zebrastraat, Gent, Belgium NV Zebrastraat, 32, Zebrastraat Gent Oost-Vlaanderen Belgium 9000 Plant biology VIB conferences@vib.be [] Life Science Researchers 250 meetings_and_conferences [] plantbiologygenomics
  • Genome assembly and annotation course 2

    19 - 23 June 2017

    Ljubljana, Slovenia

    Elixir node event
    Genome assembly and annotation course 2 https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course-2 ELIXIR Genome assembly and annotation course 2, June 19-23 2017 at the University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia 2017-06-19 09:00:00 UTC 2017-06-23 17:00:00 UTC ELIXIR SI, University of Ljubljana, Faculty of Medicine University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia University of Ljubljana, Faculty of Medicine Ljubljana Slovenia Genomics University of Ljubljana, Faculty of Medicine [] life scientistsResearchersPhD students workshops_and_courses registration_of_interest genomicsassemblytrainingeLearningEeLP
  • Genome Annotation with Monica Munoz-Torres

    27 June 2017

    University of Melbourne, Australia

    Genome Annotation with Monica Munoz-Torres https://tess.elixir-europe.org/events/genome-annotation-with-monica-munoz-torres 2017-06-27 09:00:00 UTC 2017-06-27 17:00:00 UTC Melbourne Bioinformatics 161 Barry St, Carlton, University of Melbourne, Australia 161 Barry St, Carlton University of Melbourne Australia Bioinformatics Genomics Data submission, annotation and curation Melbourne Bioinformatics [] [] [] [] BioinformaticsGenomics
  • Introduction to NGS Data Analysis

    27 - 29 June 2017

    Camperdown, Australia

    Introduction to NGS Data Analysis https://tess.elixir-europe.org/events/introduction-to-ngs-data-analysis-8290433d-ac97-4f5c-99ed-8a9bec24a058 Introduction to NGS Data Analysis is a three-day, hands-on workshop that offers attendees a basic understanding of NGS data analysis workflows. The workshop provides hands-on computational experience in analysis of NGS data using common analytical approaches for ChIP-Seq, RNA-Seq data and de novo genome assembly. 2017-06-27 09:00:00 UTC 2017-06-29 17:00:00 UTC Bioplatforms Australia Johns Hopkins Centre, Camperdown, Australia Johns Hopkins Centre Camperdown Australia 2006 Bioinformatics University of Sydney kchamp@bioplatforms.com [] [] workshops_and_courses [] Genomics
  • Genome Annotation with Monica Munoz-Torres

    3 July - 10 May 2017

    James Cook University, Australia

    Genome Annotation with Monica Munoz-Torres https://tess.elixir-europe.org/events/genome-annotation-with-monica-munoz-torres-e0429e7a-0897-4426-bb63-1136a2131375 2017-07-03 09:00:00 UTC 2017-05-10 17:00:00 UTC James Cook University Room 034-011C, James Cook University, Townsville Campus, James Cook University, Australia Room 034-011C, James Cook University, Townsville Campus James Cook University Australia Bioinformatics James Cook University ira.cooke@jcu.edu.au [] [] workshops_and_courses [] Bioinformaticsgenomics
  • Genopole Summer School

    4 - 7 July 2017

    Seine-Port, France

    Elixir node event
    Genopole Summer School https://tess.elixir-europe.org/events/bioinformatic-and-biostatistic-tools-in-medical-genomics Bioinformatic and Biostatistic tools in medical genomics 2017-07-04 09:00:00 UTC 2017-07-07 00:00:00 UTC Genopole, IFB and France Genomique Châteauform' Seine Port (77), Seine-Port, France Châteauform' Seine Port (77) Seine-Port Seine-et-Marne France 77240 Medicines research and development Metagenomics Functional genomics [] goo.gl/bzEdQ2 [] BioinformaticiansResearcher in life sciences workshops_and_courses first_come_first_served Statistical-model Variant-callingSNPbioinformaticsBiomarker discoverymetagenomicsNext generation sequencing data analysisWorkflowscomputer-science
  • Introduction to R

    12 - 13 July 2017

    Clayton, Australia

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-ab6dceb1-f7e0-4583-9b7e-4344a50535f3 This workshop will teach the fundamentals of R. You will learn to quickly visualize and summarize data from experiments involving multiple experimental factors and measurements. Register here: https://www.eventbrite.com/e/introduction-to-r-tickets-34994825465 2017-07-12 23:00:00 UTC 2017-07-13 06:00:00 UTC Monash Bioinformatics Platform Room E365 (Level 3, East wing, 20 Chancellors Walk- Menzies Building), Monash University Clayton Campus, Wellington Road, Clayton, Australia Room E365 (Level 3, East wing, 20 Chancellors Walk- Menzies Building), Monash University Clayton Campus, Wellington Road Clayton Australia Bioinformatics Monash University [] [] workshops_and_courses [] bioinformatics R-programming
  • GATK Best Practices for Variant Discovery

    17 - 19 July 2017

    Edinburgh, United Kingdom

    Elixir node event
    GATK Best Practices for Variant Discovery https://tess.elixir-europe.org/events/gatk-best-practices-for-variant-discovery This workshop will focus on the core steps involved in calling variants with the Broad’s Genome Analysis Toolkit, using the Best Practices developed by the GATK team. You will learn why each step is essential to the variant discovery process, what are the operations performed on the data at each step, and how to use the GATK tools to get the most accurate and reliable results out of your dataset. In the course of this workshop, we highlight key functionalities such as the GVCF workflow for joint variant discovery in cohorts, RNAseq-specific processing, and somatic variant discovery using MuTect2. We also preview capabilities of the upcoming GATK version 4, including a new workflow for CNV discovery, and we demonstrate the use of pipelining tools to assemble and execute GATK workflows. 2017-07-17 09:00:00 UTC 2017-07-19 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Bioinformatics Genomics Edinburgh Genomics Bert Overduin - bert.overduin@ed.ac.uk [] [] workshops_and_courses [] Variant discoveryGenomicsBioinformatics
  • Long-read Data Analysis workshop

    18 - 19 July 2017

    Kensington, Australia

    Long-read Data Analysis workshop https://tess.elixir-europe.org/events/long-read-data-analysis-workshop Workshop Content: Introduction to long-read sequencing Practical considerations when performing long-read sequencing and analysis Introduction to the command line interface and NGS file formats Short and long-read de novo genome assembly (microbial) Comparison between short and long-read assemblies This workshop will be delivered using a mixture of lectures, hands-on practical sessions, and open discussions. 2017-07-18 09:00:00 UTC 2017-07-19 17:00:00 UTC Bioplatforms Australia Red Centre Building, Kensington, Australia Red Centre Building Kensington Australia 2033 Bioinformatics University of New South Wales [] [] workshops_and_courses [] Genomics
  • An Introduction to Genomics with R

    18 July 2017

    Adelaide, Australia

    An Introduction to Genomics with R https://tess.elixir-europe.org/events/an-introduction-to-genomics-with-r 2017-07-18 09:00:00 UTC 2017-07-18 17:00:00 UTC University of Adelaide Room 422, Horace Lamb Building, The University of Adelaide, Adelaide, Australia Room 422, Horace Lamb Building, The University of Adelaide Adelaide SA Australia Bioinformatics University of Adelaide [] [] workshops_and_courses [] R-programminggenomics
  • Cancer Genomics workshop

    25 - 27 July 2017

    University of Sydney, Australia

    Cancer Genomics workshop https://tess.elixir-europe.org/events/cancer-genomics-workshop-4a98d5cd-8e5d-42d0-9845-3a52e9fee96d The Cancer Genomics workshop aims to provide an introduction to cancer genomics analytical pipelines for single nucleotide variations (SNV), copy number variations (CNV) and structural variations (SV). 2017-07-25 09:00:00 UTC 2017-07-27 17:00:00 UTC Bioplatforms Australia Charles Perkins Centre, University of Sydney, Australia Charles Perkins Centre University of Sydney Australia Bioinformatics University of Sydney kchamp@bioplatforms.com [] [] workshops_and_courses [] BioinformaticsCancerGenomics
  • Research Data Management

    28 August 2017

    Sydney, Australia

    Research Data Management https://tess.elixir-europe.org/events/research-data-management-9c8ee215-cb2d-4205-b2d4-f2d6e0f78f93 2017-08-28 09:30:00 UTC 2017-08-28 12:30:00 UTC Intersect Australia Wallace Wurth LG02, Lower ground floor, Wallace Wurth Building, UNSW, Sydney, Australia Wallace Wurth LG02, Lower ground floor, Wallace Wurth Building, UNSW Sydney Australia Data management University of New South Wales [] [] workshops_and_courses [] bioinformatics
  • Sequences and genomic features in R

    4 September 2017

    Melbourne, Australia

    Sequences and genomic features in R https://tess.elixir-europe.org/events/sequences-and-genomic-features-in-r This course introduces Bioconductor, a comprehensive collection of R packages related to bioinformatics. We will demonstrate the Bioconductor way of doing things and how to work with biological data types, and equip you to confidently approach whichever specific Bioconductor packages you need. Pre-requisite To attend this class, you must have attended our introductory R course or be reasonably familiar with the R language. 2017-09-04 14:00:00 UTC 2017-09-04 16:00:00 UTC Monash Bioinformatics Platform Melbourne, Melbourne, Australia Melbourne Melbourne Australia Bioinformatics Monash University Dr Sonika Tyagi, bioinformatics.platform@monash.edu [] PhD studentsPost-docsBioinformaticiansResearchers workshops_and_courses registration_of_interest R-programmingbioinformaticsBioconductor
  • Training course on Python for Life Scientists

    11 - 15 September 2017

    Roma, Italy

    Training course on Python for Life Scientists https://tess.elixir-europe.org/events/training-course-on-python-for-life-scientists Python is an object-oriented programming language that is ideal for biological data analysis. The course will start from zero knowledge, and will introduce the participants to all the basic concepts of Python such as calculating, organizing data, reading and writing files, program logic and writing larger programs. All the examples and practical sessions will focus on solving biological problems. In particular the sessions will cover: - working with DNA and protein sequences - data retrieval from files and their manipulation - running applications, such as BLAST, locally and from a script - finding motifs in sequence - parsing common file formats (Uniprot, GenBank, PDB) - ways to find and correct program errors. The course will be highly interactive and the students will continuously put theory into practice while learning. Basic Unix/Linux skills will be provided at the beginning of the course. 2017-09-11 09:00:00 UTC 2017-09-15 18:00:00 UTC Veronica Morea (CNR-IBPM, Rome, Italy), Allegra Via (ELIXIR-IIB Training Coordinator, CNR-IBPM, Italy), Loredana Le Pera (ELIXIR-IIB Training Team, IIT@Sapienza, Italy) Dipartimento di Scienze Biochimiche - Alessandro Rossi Fanelli, 332, Viale Regina Elena, Roma, Italy Dipartimento di Scienze Biochimiche - Alessandro Rossi Fanelli, 332, Viale Regina Elena Roma Città Metropolitana di Roma Italy 00185 Computer science Bioinformatics Computational biology Sapienza University of Rome elixir.ita.training@gmail.com, loredanalepera@gmail.com ELIXIR Italy BiologistsBioinformatics beginners 20 workshops_and_courses first_come_first_servedregistration_of_interest Python for BiologistsbioinformaticsComputer ProgrammingBiological databasesPython
  • Introductory Bioinformatics Workshops (Semester 2): Introduction to the Command Line

    19 September 2017

    Adelaide, Australia

    Introductory Bioinformatics Workshops (Semester 2): Introduction to the Command Line https://tess.elixir-europe.org/events/introductory-bioinformatics-workshops-semester-2-introduction-to-the-command-line This workshop is designed to give you the pre-requisite skills for accessing High Performance Computing (HPC) machines, like Phoenix. Basic data management strategies will also be covered in the context of next generation sequencing data. This course is accredited for 6 CaRST hours for any attending HDR students. All attendees are required to provide their own laptop for this course. No specific OS is required. 2017-09-19 09:00:00 UTC 2017-09-19 17:00:00 UTC University of Adelaide Room 422, Horace Lamb Building, The University of Adelaide, Adelaide, Australia Room 422, Horace Lamb Building, The University of Adelaide Adelaide SA Australia Bioinformatics University of Adelaide [] [] workshops_and_courses [] bioinformaticsComputer Programming
  • Genome assembly and annotation course 3

    23 - 27 October 2017

    Oeiras, Portugal

    Elixir node event
    Genome assembly and annotation course 3 https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course-3 ELIXIR Genome assembly and annotation course 3, Oct 23-27 2017 at the Gulbenkian Institute of Science, Oeiras, Portugal 2017-10-23 09:00:00 UTC 2017-10-27 17:00:00 UTC ELIXIR PT, Instituto Gulbenkian Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande, Oeiras, Portugal Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande Oeiras Portugal Genomics Instituto Gulbenkian de Ciência [] life scientistsResearchersPhD students workshops_and_courses registration_of_interest genomics AssemblyTrainingeLearningEeLP
  • Introduction to DNA-seq NGS Analysis Workshop, November 2017

    20 - 21 November 2017

    Leicester, United Kingdom

    Elixir node event
    Introduction to DNA-seq NGS Analysis Workshop, November 2017 https://tess.elixir-europe.org/events/introduction-to-dna-seq-ngs-analysis-workshop-november-2017 This two day course serves as the first in a larger two-part course in conjunction with our Exome Variants, Copy Number Calling, Variant Annotation and Reporting workshop in December 2017, as well as a standalone introduction to DNA-seq. Attendees will receive an introduction to next generation sequencing (NGS) platforms, data analysis and tools for data quality control, read alignment (mapping) and refinement using DNA-seq data. The course will conclude with a basic introduction to variant calling as a lead-in to the December workshop. 2017-11-20 09:00:00 UTC 2017-11-21 17:00:00 UTC University of Leicester BBASH College Court, Leicester, United Kingdom College Court Leicester Leicestershire United Kingdom LE2 3UF Bioinformatics Genetics University of Leicester [] AcademicspostdocsPhD studentsClinical Scientists workshops_and_courses [] DNA-seqbioinformatics

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