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  • RaukR, Advanced R for Bioinformatics, Summer course

    10 - 21 June 2018

    Visby, Sverige

    Elixir node event
    RaukR, Advanced R for Bioinformatics, Summer course https://tess.elixir-europe.org/events/raukr-advanced-r-for-bioinformatics-summer-school International course. The course is open for researchers at university or in industry such as PhD students, postdocs, group leaders, core facility staff and analysts. Contact: RaukR@NBIS.se Course description: Join us in medieval Visby this June to improve your R skills and have a nice time! In Life Science and Bioinformatics, R is increasingly being used to transform and analyse data, perform statistical analysis and produce publication-ready visualizations. This Summer course will focus on advanced R functionality, to increase the participants skillset and understanding of what is possible to do today. You are very welcome to apply or see the homepage for more information. Please, help us spread the word to interested participants! Guest speakers Martin Morgan (Director at Bioconductor) Paula Moraga (Lancaster Univ., RLadies) Yhui Xie (RStudio) Course content: Reproducibility with R Writing R packages R scripts S3, S4 and Reference Classes Code debugging and optimization R markdown tidyverse Bioconductor ggplot2 Interactive plots Statistics in R Machine Learning Shiny web applications Working with maps Area specific workshops (RNAseq, spatial stats etc) Working with your own dataset Course fee Academic: 8500 SEK (Includes participation in all official activities and events, course materials, breakfast, lunch and accommodations). Participants from outside of academia should contact us for a fee quote. The fee does not include travel costs. Important dates Application open: March 17 Application deadline: April 15 Notification of acceptance/decline: April 25 2018-06-10 09:00:00 UTC 2018-06-21 00:00:00 UTC NBIS (National Bioinformatics Infrastructure Sweden) Visby, Sverige Visby Sverige [] RaukR@NBIS.se Course leaders: Marcin Kierczak and Sebastian DiLorenzo [] Life Science Researchers workshops_and_courses [] R-programming
  • Genome assembly and annotation course 4

    24 - 28 September 2018

    Montferrier-sur-Lez (Montpellier area), France

    Elixir node event
    Genome assembly and annotation course 4 https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course-4 ELIXIR Genome assembly and annotation course 4, Sept 24-28 2018 at the CIRAD, Montpellier, France 2018-09-24 09:00:00 UTC 2018-09-28 17:00:00 UTC ELIXIR-BE, ELIXIR-FR, ELIXIR-NO, ELIXIR-PT, ELIXIR-SE, ELIXIR-SI Cirad, 389, Avenue Agropolis, Montferrier-sur-Lez (Montpellier area), France Cirad, 389, Avenue Agropolis Montferrier-sur-Lez (Montpellier area) Hérault France Genomics CIRAD elixir@mf.uni-lj.si [] life scientistsResearchersPhD students 25 [] registration_of_interest Genomics AssemblyTrainingeLearningEeLP
  • Genome assembly and annotation course 5

    1 - 5 July 2019

    Milan, Italy

    Elixir node event
    Genome assembly and annotation course 5 https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course-5 A **genome assembly and annotation course** will take place on **July 1-5, 2019** in **Milan, Italy**, hosted by the Italian ELIXIR Node in cooperation with other ELIXIR nodes that are involved in the ELIXIR-EXCELERATE task 10.3 “Capacity Building in Genome Assembly and Annotation”. Some of the most experienced assembly and annotation experts in Europe will be teaching at the course. The course is aimed at researchers interested in learning more about genome assembly and annotation. It will include information useful for both the beginner and the more advanced user. We will start by introducing general concepts and then continue with a step-by-step description of all major components of a genome assembly and annotation workflow, from raw data all the way to a final assembled and annotated genome. There will be a mix of lectures and hands-on practical exercises using Unix/Linux command line. After the course, the participants will have knowledge of commonly used assembly practices and tools. They will be able to run assembly and annotation projects on their own. **Prerequisites:** - **Working knowledge of Unix/Linux command line** - **As part of the course agenda, course participants will prepare a short presentation about their own projects.** Optionally, they may also bring their own data. **Instructions how to register for the course are available on the [ELIXIR-SI eLearning Platform (EELP)](https://elixir.mf.uni-lj.si/course/view.php?id=45).** You will be able to access the course after you register and your registration is approved by the course organizers. 2019-07-01 09:00:00 UTC 2019-07-05 17:00:00 UTC ELIXIR Italy University of Milano-Bicocca, Building U7, Lab 715, Milan, Italy University of Milano-Bicocca, Building U7, Lab 715 Milan Città Metropolitana di Milano Italy Genomics University of Milano-Bicocca, Italy General questions: gianluca.dellavedova@unimib.it Questions about the course agenda: henrik.lantz@nbis.se National Research Council of ItalyINRANBIS - National Bioinformatics Infrastructure SwedenELIXIR EXCELERATE life scientistsResearchersPhD students 24 workshops_and_courses registration_of_interest Genomics AssemblyTrainingeLearningEeLP
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