Register event
  • RNA-Seq using R

    28 September 2015

    Melbourne, Australia

    RNA-Seq using R https://tess.elixir-europe.org/events/rna-seq-using-r The Monash Bioinformatics Platform want to help make introductory bioinformatic approaches part of the research landscape in Biomedicine. To do this, a foundation level of expertise amongst as many researchers as possible is an important step forward. The platform will then be available to facilitate this work as well as develop more advanced bioinformatic projects with our researchers. We are running a two day hands-on workshop with a focus on enabling researchers to be able to analyse RNASeq (next-gen sequencing) data. Day 1, we will begin by teaching an introduction to programming using the R language. Day 2 will focus on using this knowledge to perform bioinformatic data analysis of some RNASeq data. Day one (Programming in R) is optional, for those well-versed in the R programming language, or programming in general. The workshop will be taught in a similar style to Software Carpentry workshops. Software Carpentry's mission is to help scientists and engineers get more research done in less time and with less pain by teaching them basic lab skills for scientific computing. For more information on what we teach and why, please see our paper "Best Practices for Scientific Computing". Who: The course is aimed at graduate students and other researchers. 2015-09-28 09:00:00 UTC 2015-09-28 00:00:00 UTC Monash Bioinformatics Platform, Melbourne, Australia Monash Bioinformatics Platform Melbourne Australia Computer science Biomedical science Software engineering Computational biology RNA-Seq [] [] [] workshops_and_courses [] ABRBioinformaticsComputationalBiology
  • RNASeq using R

    30 November 2015

    Melbourne, Australia

    RNASeq using R https://tess.elixir-europe.org/events/rnaseq-using-r RNA-Seq using R 2015-11-30 09:00:00 UTC 2015-11-30 00:00:00 UTC Monash University Monash Bioinformatics Platform, Melbourne, Australia Monash Bioinformatics Platform Melbourne Australia Computational biology Software engineering RNA-Seq [] [] [] workshops_and_courses [] ABRBioinformaticsComputationalBiology
  • RNAseq using R

    1 - 2 June 2016

    Melbourne, Australia

    RNAseq using R https://tess.elixir-europe.org/events/rnaseq-using-r-632bdf76-dd3d-4c41-9e65-b175a2bb37e6 The Monash Bioinformatics Platform want to help make introductory bioinformatic approaches part of the research landscape in Biomedicine. To do this, a foundation level of expertise amongst as many researchers as possible is an important step forward. The platform will then be available to facilitate this work as well as develop more advanced bioinformatic projects with our researchers. We are running a two day hands-on workshop with a focus on enabling researchers to be able to analyse RNASeq (next-gen sequencing) data. Day 1, we will begin by teaching an introduction to programming using the R language. Day 2 will focus on using this knowledge to perform bioinformatic data analysis of some RNASeq data. The workshop will be taught in a similar style to Software Carpentry workshops. Software Carpentry's mission is to help scientists and engineers get more research done in less time and with less pain by teaching them basic lab skills for scientific computing. For more information on what we teach and why, please see our paper "Best Practices for Scientific Computing". Who: The course is aimed at graduate students and other researchers. You don't need to have any previous knowledge of the tools that will be presented at the workshop. 2016-06-01 09:00:00 UTC 2016-06-02 00:00:00 UTC Monash University Monash Bioinformatics Platform, Melbourne, Australia Monash Bioinformatics Platform Melbourne Australia Software engineering Computational biology RNA-Seq [] [] [] workshops_and_courses [] ABRBioinformaticsComputationalBiology
  • Introduction to Molecular Modelling & Visualisation for Life Sciences

    4 July 2016

    University of Melbourne, Australia

    Introduction to Molecular Modelling & Visualisation for Life Sciences https://tess.elixir-europe.org/events/introduction-to-molecular-modelling-visualisation-for-life-sciences This VLSCI workshop introduces beginners to molecular modelling and visualisation techniques using packages such as VMD and NAMD. After introductory talks, participants will be given practical exercises to visualise molecules as well as learn how to submit jobs to the VLSCI clusters. 2016-07-04 09:00:00 UTC 2016-07-04 00:00:00 UTC VLSCI - University of Melbourne Lab-14, VLSCI, University of Melbourne, Australia Lab-14, VLSCI University of Melbourne Australia Computational chemistry Computational biology Molecular modelling Molecular dynamics Data architecture, analysis and design [] [] [] workshops_and_courses [] ABRVLSCIComputationalBiologyMolecularInteractions
  • Cleaning & Exploring your data with Open Refine at USYD Camperdown

    27 September 2016

    Sydney, Australia

    Cleaning & Exploring your data with Open Refine at USYD Camperdown https://tess.elixir-europe.org/events/cleaning-exploring-your-data-with-open-refine-at-usyd-camperdown This three hour workshop presented by Intersect Australia introduces Open Refine which is a powerful tool for cleaning, normalisation and exploration of datasets. In this tutorial attendees will work through the various features of Refine, including importing data, faceting, clustering, and calling into remote APIs, by working on a fictional but plausible humanities research project. Who can access Intersect training services? * Researchers, research groups, and Higher-Degree Research students from any Intersect member organisation. * For people and organisations outside the Intersect membership, training can be provided on a fee-for-service basis. Please email: training@intersect.org.au 2016-09-27 09:00:00 UTC 2016-09-27 00:00:00 UTC University of Sydney Camperdown, Sydney, Australia Camperdown Sydney Australia Data architecture, analysis and design Data management [] [] [] workshops_and_courses [] ABRDatamanipulation
  • Training Course on Best practices for RNA-Seq data analysis

    27 - 29 September 2017

    Fisciano, Italy

    Training Course on Best practices for RNA-Seq data analysis https://tess.elixir-europe.org/events/training-course-on-best-practices-for-rna-seq-data-analysis Next-generation sequencing (NGS) of RNA libraries (RNA-Seq) has become increasingly common and it largely replaced microarray technology for gene expression profiling. The aim of this course is to get a deeper understanding of RNA-Seq experiments, providing a theoretical introduction to the data processing steps, together with practical sessions illustrating the use of the most popular data analysis tools. The classroom size is limited to 25 participants to optimize the learning and the interaction with the instructors. Starting from the raw sequenced data coming from different phenotypical samples (e.g disease vs healthy control samples), genes which are differentially expressed between the two conditions are determine. Some strategies are illustrated for detecting alternative splicing products, predicting novel isoforms and gene fusion events. Some methods for downstream analysis are described to give insight into how biological knowledge can be generated from RNA-Seq experiments. A lecture on single-cell RNA-Seq will provide an idea of how transcriptome data from individual cells is now emerging as a powerful tool, allowing the study of cell-to-cell gene expression heterogeneity in the same tissue. 2017-09-27 09:15:00 UTC 2017-09-29 16:30:00 UTC Anna Marabotti (University of Salerno and ELIXIR-IIB Training Team, Italy), Roberto Tagliaferri (University of Salerno, Italy), Alessandro Weisz (University of Salerno, Italy), Loredana Le Pera (ELIXIR-IIB Training Team and IIT, Italy), Allegra Via (ELIXIR-IIB Training Coordinator, CNR-IBPM, Italy) Campus di Fisciano, Università degli Studi di Salerno, Via Giovanni Paolo II, n. 132, Fisciano, Italy Campus di Fisciano, Università degli Studi di Salerno, Via Giovanni Paolo II, n. 132 Fisciano Provincia di Salerno Italy 84084 Transcriptomics RNA splicing Sequencing Bioinformatics RNA-Seq Gene expression Campus di Fisciano, University of Salerno, Italy elixir.ita.training@gmail.com, amarabotti@unisa.it ELIXIR Italy PhD students and young researchers in the life science and computational biology field who are planning to use RNA-seq data and are looking for the best practices to analyze these types of data 25 workshops_and_courses first_come_first_servedregistration_of_interest NGSRNA-SeqBioinformaticsData analysisHigh Throughput Sequencing AnalysisGene Expression
  • Introduction to RNA-seq Data Analysis

    5 - 7 August 2019

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to RNA-seq Data Analysis https://tess.elixir-europe.org/events/introduction-to-rna-seq-data-analysis-5989e86e-a408-481d-b3c7-5a1413b0e4a6 RNA sequencing (RNA-seq) is quickly becoming the method of choice for transcriptome profiling. Nevertheless, it is a non-trivial task to transform the vast amount of data obtained with high-throughput sequencers into useful information. Thus, RNA-seq data analysis is still a major bottleneck for most researchers in this field. The ability of correctly interpreting RNA-seq results, as well as knowledge on the intrinsic properties of these data, are essential to avoid incorrect experimental designs and the application of inappropriate analysis methodologies. The aim of this workshop is to familiarise researchers with RNA-seq data and to initiate them in the analysis by providing lectures and practicals on analysis methodologies. In the practicals Illumina-generated sequencing data and various widely used software programs will be used. 2019-08-05 09:00:00 UTC 2019-08-07 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN RNA-Seq Genomics Bioinformatics Edinburgh Genomics Edinburgh Genomics Training Team - edge-training@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsGenomicsRNA-seq
Note, this map only displays events that have geolocation information in TeSS.
For the complete list of events in TeSS, click the grid tab.