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5 events found

Scientific topics: Computational biology  or Metabolomics 

and

Keywords: eLearning  or Immunity  or EeLP  or toxicology  or python  or Docker  or Metabolic pathway 

  • ISAtab, diXa data warehouse user interface, eChemportal

    19 March 2013

    Ispra, Italy

    ISAtab, diXa data warehouse user interface, eChemportal https://tess.elixir-europe.org/events/isatab-dixa-data-warehouse-user-interface-echemportal 2013-03-19 00:00:00 UTC 2013-03-19 00:00:00 UTC diXa Ispra, Italy Ispra Italy Metabolomics Bioinformatics [] [] [] workshops_and_courses [] toxicologytoxicogenomics
  • Small molecules, gene products and their interaction

    2 - 6 July 2013

    Maastricht, Netherlands

    Small molecules, gene products and their interaction https://tess.elixir-europe.org/events/small-molecules-gene-products-and-their-interaction 2013-07-02 00:00:00 UTC 2013-07-06 00:00:00 UTC NBIC Maastricht, Netherlands Maastricht Netherlands Systems biology Proteomics Metabolomics Genomics Bioinformatics [] [] [] workshops_and_courses [] toxicologytoxicogenomics
  • ELIXIR-EXCELERATE HPC Train-the-Researcher course

    6 - 7 April 2017

    Málaga, Spain

    Elixir node event
    ELIXIR-EXCELERATE HPC Train-the-Researcher course https://tess.elixir-europe.org/events/elixir-excelerate-hpc-train-the-researcher-course-3af9b3c7-94a5-46ae-a68c-1c73b87049ab ELIXIR-EXCELERATE HPC Train-the-Researcher course, Apr 6-7, 2017, Malaga, Spain 2017-04-06 09:00:00 UTC 2017-04-07 17:00:00 UTC Escuela Técnica Superior de Ingeniería Informática Escuela Técnica Superior de Ingeniería Informática, 35, Bulevar Louis Pasteur, Málaga, Spain Escuela Técnica Superior de Ingeniería Informática, 35, Bulevar Louis Pasteur Málaga Málaga Spain Computational biology Computer science Escuela Técnica Superior de Ingeniería Informática, University of Malaga [] life scientistsResearchers workshops_and_courses registration_of_interest high-performance computingtrainingeLearningEeLP
  • H3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 1

    20 August 2018

    H3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 1 https://tess.elixir-europe.org/events/h3abionet-2018-genotyping-chip-data-analysis-and-gwas-lecture-series #### Computational requirements for running the H3ABioNet GWAS workflows The first of a series of seven online lectures for Genome Wide Association Studies (GWAS) will cover the technical requirements for setting up a your computational environment for running the H3ABioNet GWAS workflows. In this inaugural lecture of the series, Prof. Hazelhurst will cover the the following topics: Installing and using Nextflow Installing and using Github Use of containers for packaging and running tools Pulling the GWAS pipeline from Github and running it As this lecture aims to provide attendees with an environment to the run the H3ABioNet GWAS workflow at their own pace, there are some preliminary software requirements: Either a Linux machine or an Apple running macOS Ideally you should have machine with at least 2-4 cores and 8GB of RAM. Java 8 Nextflow installed (see installation instructions at https://www.nextflow.io/) Python 3 Please also install either Docker OR the following dependencies using pip3: Pandas, Matplotlib, Openpyxl, SciPy, NumPy PLINK 1.9 [Please also refer to the following documentation to obtain the H3ABioNet GWAS workflow]: https://github.com/h3abionet/h3agwas/blob/master/README.md 2018-08-20 15:00:00 UTC 2018-08-20 16:30:00 UTC H3ABioNet Population genomics Genotyping experiment Computational biology Workflows GWAS study Bioinformatics H3ABioNet info@h3abionet.org H3ABioNet Anyone intersted in GWAS and using the H3Africa genotyping chipAnyone who wants to learn more about GWAS workshops_and_courses [] NextflowDockerH3ABioNetGWASWorkflowsGenotyping array analysis bioinformaticsAfricaPopulation GenomicsReproducible ScienceH3Africa genotyping arrayHigh performance computingCloud computingGWAS workflowH3ABioNet GWAS 2018 Lecture Series
  • WikiPathways Summit 2018

    8 - 10 October 2018

    San Francisco, United States of America

    Elixir node event
    WikiPathways Summit 2018 https://tess.elixir-europe.org/events/wikipathways-summit-2018 To celebrate 10 years of open science, the WikiPathways team is hosting a 3-day summit at Gladstone Institutes in San Francisco featuring seminars and hands-on workshops. Each day of the event is themed to serve the various communities of users and contributors working with biological pathways. Anyone interested in pathways is welcome to attend. No prior experience with WikiPathways is required. 2018-10-08 09:00:00 UTC 2018-10-10 17:00:00 UTC The WikiPathways Project 1650 Owens St, 1650, Owens Street, San Francisco, United States of America 1650 Owens St, 1650, Owens Street San Francisco San Francisco County United States of America Systems biology Metabolomics Gladstone InstitutesMaastricht University [] Researchersbiocuratorsbioinformaticians meetings_and_conferencesworkshops_and_courses [] Pathway analysisMetabolic pathwayBiological databases
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