Scientific topics: Bioinformatics
EMBL-ABR/ELIXIR workshop: Open Source and Software Development Best Practice
8 December 2016
University of Melbourne, AustraliaEMBL-ABR/ELIXIR workshop: Open Source and Software Development Best Practice https://www.embl-abr.org.au/bioinformatics-sw-workshop/ https://tess.elixir-europe.org/events/embl-abr-elixir-workshop-open-source-and-software-development-best-practice This workshop will provide an interactive forum to discuss, review and gain an overview of Open Source and Software Development and will be based on content from the ELIXIR Software Development Best Practices group and aims to explore how to harmonise EMBL-ABR efforts in this area. Participants will reflect together on their own experiences and discuss what are the challenges, mechanisms and recognition systems are for those who get involved in open source. We would like to use this also as an opportunity to further define what would be the best practice model in terms of software development when it comes to activities under EMBL-ABR. Bioinformaticians involved with software development are the target audience. 2016-12-08 09:00:00 UTC 2016-12-08 00:00:00 UTC EMBl-ABR Lab-14, University of Melbourne, Australia Lab-14 University of Melbourne Australia Computational biology Bioinformatics    workshops_and_courses  ABRlifescienceBioinformatics
Galaxy Australasia Meeting
3 - 9 February 2017
Melbourne, AustriaGalaxy Australasia Meeting https://www.embl-abr.org.au/game2017/ https://tess.elixir-europe.org/events/galaxy-australasia-meeting The conference starts 4 February and features two full days of keynotes, accepted and sponsor talks, poster and sponsor sessions, birds-of-a-feather gatherings, the conference dinner, and lots of opportunities for networking. The meeting is preceded by a Researcher Training Day on 3 February aimed at biomedical researchers who need to do bioinformatic analysis. Finally, the meeting is followed by a four day Galaxy Admin Training session for those installing and maintaining Galaxy servers. 2017-02-03 09:00:00 UTC 2017-02-09 00:00:00 UTC EMBl-ABR Lab-14, Melbourne, Austria Lab-14 Melbourne Austria Bioinformatics    meetings_and_conferences  ABRBioinformaticslifescience
Introductory Linux Tutorial for Life Sciences 4
10 - 12 December 2019Introductory Linux Tutorial for Life Sciences 4 https://elixir.mf.uni-lj.si/course/view.php?id=49 https://tess.elixir-europe.org/events/introductory-linux-tutorial-for-life-sciences-4 NBIS (the Swedish node of ELIXIR) and ELIXIR Slovenia are offering an "Introduction to Linux" course targeted at life scientists who want to extend their skills and knowledge. Big data (usually in the form of large text files) are generated nowadays in many fields of science. Trying to handle this data with applications like Word or Excel is difficult or impossible, while using the Linux command line can improve data processing efficiency. Unix/Linux provides an excellent computing environment for several disciplines (such as bioinformatics, physics, engineering) and the command line interpreter (shell) serves as an interface to many big-data processing programs. The course provides a basic introduction to Unix/Linux commands and covers how Unix/Linux commands can be used to manage and inspect your data and results, and how to generate and run pipelines and workflows using basic shell scripting. Finally, we will show you how the command line is used for access to supercomputers for boosting your scientific research. Participants will be able to attend the course either by traveling to Stockholm or to Umeå in Sweden, to Ljubljana in Slovenia, or by connecting remotely via the ELIXIR Slovenia eLearning Platform (EeLP). The number of remote students is limited to 30. The number of students per classroom is limited to 15 for Stockholm and Umeå, and 20 for Ljubljana. Additional participants will be placed on a waiting list and contacted as soon as space becomes available. The course will be broadcast from Sweden. ***The registration deadline has been extended until Friday, November 22.*** 2019-12-10 09:00:00 UTC 2019-12-12 17:00:00 UTC ELIXIR Sweden (NBIS) and ELIXIR Slovenia Bioinformatics Computer science NBISUniversity of Ljubljana, Faculty of Medicine  Life Science ResearchersbioinformaticiansBiophysicistsengineers   life sciences LinuxUnixEeLPeLearningCommand line
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