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  • GOBLET/ELIXIR-EXCELERATE Workshop on e-learning

    21 November 2017

    Oeiras, Portugal

    Elixir node event
    GOBLET/ELIXIR-EXCELERATE Workshop on e-learning https://tess.elixir-europe.org/events/goblet-elixir-excelerate-workshop-on-e-learning GOBLET/ELIXIR-EXCELERATE Workshop on e-learning, Nov 21, 2017 at the Gulbenkian Institute of Science, Oeiras, Portugal 2017-11-21 09:00:00 UTC 2017-11-21 17:00:00 UTC Instituto Gulbenkian, ELIXIR Portugal, GOBLET Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande, Oeiras, Portugal Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande Oeiras Portugal Bioinformatics Instituto Gulbenkian de Ciência [] Researchersteachers workshops_and_courses registration_of_interest TeachingeLearningEeLPbioinformatics
  • Genome sequencing technologies, assembly, variant calling and statistical genomics

    22 October - 2 November 2018

    Oslo, Norway

    Elixir node event
    Genome sequencing technologies, assembly, variant calling and statistical genomics https://tess.elixir-europe.org/events/genome-sequencing-technologies-assembly-variant-calling-and-statistical-genomics-3d1544a3-a560-4b49-9e8c-af9167caea91 2018-10-22 09:00:00 UTC 2018-11-02 17:00:00 UTC NORBIS, the Norwegian national research school in bioinformatics, biostatistics and systems biology Gaustadalléen 23, 23, Gaustadalléen, Oslo, Norway Gaustadalléen 23, 23, Gaustadalléen Oslo Oslo kommune Norway Sequencing Statistics and probability Bioinformatics Genomics university of Oslo contact-norbis@uib.no NORBIS PhD studentsPost DocsResearchers [] registration_of_interest genomicsbioinformaticsGenome sequence analysis
  • Hands-on data analysis workshop

    6 September 2019

    Bergen, Norway

    Elixir node event
    Hands-on data analysis workshop https://tess.elixir-europe.org/events/hands-on-data-analysis-workshop-d95f0050-8a20-4a7a-a65b-bec6855f7f58 Format: Bring your laptop with an updated internet browser (Chrome, Firefox or Safari). This is an interactive workshop! Register free here: https://forms.gle/dvrevioB7cmaMMpA6 During the workshop, you will have the opportunity to work on a dataset/problem/question of your choice (such as your own research question, or e.g. a Galaxy analysis tutorial) with our assistance. This is also a good opportunity to get more experience on: - Services for sensitive data (TSD)" including computing on the Colossus cluster - NGS data analysis using NeLS Galaxy https://galaxy-uib.bioinfo.no/ - How to use the NeLS portal https://nels.bioinfo.no/ for Data Management in your project - How to use StoreBioInfo https://storebioinfo.norstore.no/ for Data Management in your project If you have a specific question you would like to get help with during the workshop, kindly notify us ahead, so we may be prepared. Also, if you have wishes for topics to discuss in plenum for this, and also future workshops, please let us know. We have in the works an introduction to NeLS and Galaxy for students and researchers new to bioinformatics so if you have or know people that would be interested in taking part please watch this space for more information. 2019-09-06 09:00:00 UTC 2019-09-06 12:00:00 UTC ELIXIR Norway Meeting Room 505O2, CBU, Høyteknologisenteret 5th floor, Thormøhlens Gate 55A, Bergen, Norway Meeting Room 505O2, CBU, Høyteknologisenteret 5th floor, Thormøhlens Gate 55A Bergen Norway University of Bergen david.dolan@uib.no [] [] workshops_and_courses [] Hands-onNeLSGalaxydata managementNGS analysis
  • Plant Phenotyping

    12 November 2019

    Oeiras, Portugal

    Plant Phenotyping https://tess.elixir-europe.org/events/plant-phenotyping Plant phenotyping research has gone through a data revolution with the automation of plant phenotyping platforms, making it critical to adopt good data management practices in order the exploit the torrent of data to its full potential. Concretely, data should be published in a Findable, Accessible, Interoperable and Reusable (FAIR) way in order to enable the integration of data from disparate sources and the discovery of new knowledge. Yet, this is one of the more challenging domains to standardize, as it is extremely heterogeneous in terms of experimental settings and types of data. The ELIXIR infrastructure, with prominent contributions from BioData.pt (the Portuguese ELIXIR node) has been tackling this challenge at the European and international level, by developing standards and services to enable the management of plant phenotype-genotype data and its publication in accordance with the FAIR principles. In this workshop, we will be presenting the outcomes of this work from the ELIXIR plant sciences community, featuring a keynote from one of its key members, Dr. Anne-Françoise Adam-Blondon (ELIXIR-France), a detailed tutorial about the design and usage of the MIAPPE (Minimum Information About Plant Phenotyping Experiments), a hands-on data annotation and publication session, and a demonstration of ELIXIR’s Plant Data Search service. 2019-11-12 14:00:00 UTC 2019-11-12 19:00:00 UTC ITQB Instituto de Tecnologia Química e Biológica António Xavier, Oeiras, Portugal Instituto de Tecnologia Química e Biológica António Xavier Oeiras Lisbon Portugal 2775-412 Oeiras ITQB NOVA - Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de LisboaBiodata.pt - Elixir's portuguese node of the european projec [] Life Science ResearchersBiologists, Genomicists, Computer Scientistsplant researchers workshops_and_courses [] Plant PhenotypingGenotypingdata managementbioinformatics
  • ELIXIR Norway: Hands-on bioinformatics NeLS workshop

    26 November 2019

    Tromsø, Norway

    Elixir node event
    ELIXIR Norway: Hands-on bioinformatics NeLS workshop https://tess.elixir-europe.org/events/elixir-norway-hands-on-bioinformatics-nels-workshop We are pleased to announce the second hands-on bioinformatics NeLS workshop organised in Tromsø by [ELIXIR Norway](https://www.elixir-norway.org/). The topic is on how you can use the Norwegian e-Infrastructure for Life Sciences - [NeLS](nels.bioinfo.no) to store and share data, and to run analyses via customisable analysis workflows in Galaxy. More specifically, we will go through how you can store data in NeLS and upload it directly into Galaxy. We will also construct and run a complete sequence analysis workflow for taxonomic profiling on a metagenomic sample. There are no requirements for programming skills or experience using the command line, as Galaxy provides a web interface for running analysis. 2019-11-26 09:00:00 UTC 2019-11-26 15:00:00 UTC ELIXIR Norway University of Tromsø, Medisin og helsefagbygget (MH øst): Datarom (U7.110), Tromsø, Norway University of Tromsø, Medisin og helsefagbygget (MH øst): Datarom (U7.110) Tromsø Tromsø Norway 9019 Bioinformatics University of Tromsø ELIXIR Norway life scientistsdata managers 20 workshops_and_courses by_invitation bioinformaticsNeLSGalaxyEeLPeLearning
  • ELIXIR Norway: Workshop in Data Management for Life Science projects

    21 February 2020

    Tromsø, Norway

    Elixir node event
    ELIXIR Norway: Workshop in Data Management for Life Science projects https://tess.elixir-europe.org/events/elixir-norway-workshop-in-data-management-for-life-science-projects The topic of the workshop is how to generate a data management plan for a research project that will meet the requirements of the funding organisations. The intended audience are researchers (PhD candidates, post-doctoral fellows, researchers, associate professors, professors) who are planning to submit a grant application for a research project. You will set up a data management plan for your project using the **ELIXIR Norway Data Steward Wizard (DSW) tool**. DSW is more flexible and provides more domain specific templates than the easyDMP offered by Uninett/Sigma2. **Course content:** -Requirements from the funding bodies and legal requirements -Licensing of data, biological material and software -Information on national and local storage infrastructures -Relevant deposition repositories (data archives) -Hands on training and assistance to generate a data management plan **Requirements:** -Bring your laptop -Optionally you can also bring your research project (if you have one) **Teachers:** -Korbinian Bösl -Erik Hjerde -Nils Peder Willassen 2020-02-21 09:00:00 UTC 2020-02-21 15:30:00 UTC ELIXIR Norway University of Tromsø, Tromsø, Norway University of Tromsø Tromsø Troms Norway 9019 Data quality management University of Tromsø ELIXIR Norway PhD candidatesPost-Doctoral FellowsResearchersAssociate ProfessorsProfessorsdata managers workshops_and_courses registration_of_interest data stewardship DSWdata managementlife sciencesData management planeLearningEeLP
  • Data Management Planning workshop for Life Science Projects

    4 March 2020

    Bergen, Norway

    Data Management Planning workshop for Life Science Projects https://tess.elixir-europe.org/events/data-management-planning-workshop-for-life-science-projects We are pleased to announce the Data Management planning workshop for Life Scientists organised in Bergen by [ELIXIR Norway](https://www.elixir-norway.org/), [Digital Life Norway](https://digitallifenorway.org/) and [UiB library](https://www.uib.no/en/ub). The intended audience are researchers (PhD candidates, Post Doctoral Fellows, Researchers, Associate Professors and Professors) who are planning to submit a grant application for a research project. Max. number of participants is 30. In this course we will cover how to generate a data management plan for a Life Science research project, which will meet the requirements of the funding organisations. ## Course content: ##### 0900 - 0915 Introduction ##### 0915 - 0945 Requirements from institutions & funding bodies * H2020/ERC * Research Council Norway ##### 0945 - 1015 About legal requirements * Health Research Act * Personal Data Act ##### 1015 - 1030 Short break ##### 1030 - 1115 Licensing of data, biological material and software ##### 1115 - 1200 Information on national and local storage infrastructures * NeLS/StoreBioInfo * NIRD * TSD * UiB Computing & Storage resources * SAFE ##### 1200 - 1230 Lunch ##### 1230 - 1315 Relevant deposition repositories/ data archives * domain specific archives (ELIXIR/EMBL-EBI, NCBI) * NIRD archive * UiB Open Research Data/ DataverseNO * NSD ##### 1315 - 1330 Short break ##### 1330 - 1600 Hands on training and assistance to generate a data management plan ## Requirements: Bring your own laptop and your research project if you have one. You will get the opportunity to set up a data management plan for your project with help of the [Data Steward Wizard tool](https://elixir-no.ds-wizard.org) using a structured and detailed questionnaire with references to relevant resources. #### [Register](https://skjemaker.app.uib.no/view.php?id=7921185) before 27th of February 2020 2020-03-04 09:00:00 UTC 2020-03-04 16:00:00 UTC ELIXIR-Norway Lars Hilles gate 30, UiB Learning Lab Store læringsrom, http://bit.ly/2RDl0hX, Bergen, Norway Lars Hilles gate 30, UiB Learning Lab Store læringsrom, http://bit.ly/2RDl0hX Bergen Norway 5008 Data management Data submission, annotation and curation University of Bergen Beate Krøvel Humberset, Kjersti Hasle Enerstvedt and Korbinian Bösl Digital Life Norway PhD StudentsPost DocsProfessorsResearchers 30 workshops_and_courses first_come_first_served Data management plandata management
  • Data Management Planning workshop for Life Science Projects

    11 March 2020

    Ås, Norway

    Elixir node event
    Data Management Planning workshop for Life Science Projects https://tess.elixir-europe.org/events/life-science-data-managment-planning-workshop We are pleased to announce the Data Management planning workshop for Life Scientists organised in Ås by [ELIXIR Norway](https://www.elixir-norway.org/) and [Digital Life Norway](https://digitallifenorway.org/). The intended audience are researchers (PhD candidates, Post Doctoral Fellows, Researchers, Associate Professors and Professors) that are planning to submit a grant application for a research project. Max. number of participants is 20. The topic is on how you can generate a data management plan for a Life Science research project that will meet the requirements of the funding organisations. ## Course content: ##### 0900 - 0945 Requirements from the funding bodies * NMBU * H2020/ERC * Research Council Norway ##### 0945 - 1015 About legal requirements * Health Research Act * Personal Data Act ##### 1015 - 1030 Short break ##### 1030 - 1115 Licensing of data, biological material and software ##### 1115 - 1200 Information on national and local storage infrastructures * NeLS/StoreBioInfo * NIRD * TSD * NMBU w: drive ##### 1200 - 1230 Lunch ##### 1230 - 1315 Relevant deposition repositories/ data archives * domain specific archives * NIRD archive * NMBU Open Research Data/ DataverseNO ##### 1315 - 1330 Short break ##### 1330 - 1600 Hands on training and assistance to generate a data management plan ## Requirements: Bring your own laptop and your research project if you have one. You will get the opportunity to set up a data management plan for your project with help of the [Data Steward Wizard tool](https://elixir-no.ds-wizard.org) using a structured and detailed questionnaire with references to relevant resources. #### [Register](https://skjemaker.app.uib.no/view.php?id=7883809) before 01 March 2020 2020-03-11 09:00:00 UTC 2020-03-11 16:00:00 UTC ELIXIR-Norway Universitetstunet, Ås, Norway Universitetstunet Ås Norway 1433 Data management Norwegian University of Life Sciences Solveig Fossum-Raunehaug, Korbinian Bösl, Thu Hien To Digital Life Norway PhD studentsPost DocsResearchersProfessors 20 workshops_and_courses first_come_first_served DMPData management plandata management
  • An Introduction to Data Management

    23 June 2020

    Elixir node event
    An Introduction to Data Management https://tess.elixir-europe.org/events/an-introduction-to-data-management Understanding data management in a research environment is becoming increasingly important as national and European infrastructures promote ERA-wide Open Science policies. At present EU funding agencies require researchers to provide a Data Management Plan; a requirement that is likely to be standard at the national level in the near future. So what are the responsibilities of publicly-funded researchers with respect to scientific data? This course will introduce (meta) data types, how they are managed in an Open Science research environment, and how to comply with FAIR data principles. The course will also discuss what computational resources and expertise are available to researchers. Presented and sponsored by BioData.pt/ELIXIR.pt - the Portuguese National Bioinformatics Infrastructure - and the Ready for BioData Management Programme. 2020-06-23 10:00:00 UTC 2020-06-23 12:30:00 UTC CCMAR / BioData.pt Data management CCMAR, Centre for Marine Sciences Cymon J. Cox (https://www.ccmar.ualg.pt/users/cymon) BioData.pt ResearchersGraduate Students 150 workshops_and_courses registration_of_interest data managementData management plan
  • Data Management Planning workshop for Life Science Projects - Trondheim

    30 November - 1 December 2020

    Data Management Planning workshop for Life Science Projects - Trondheim https://tess.elixir-europe.org/events/data-management-planning-workshop-for-life-science-projects-4e39d168-ea35-4850-9710-2a59d6a8548d We are pleased to announce the Data Management planning workshop for Life Scientists organised in Trondheim by [ELIXIR Norway](https://www.elixir-norway.org/), [Digital Life Norway](https://digitallifenorway.org/) and [Research Data@NTNU](https://innsida.ntnu.no/researchdata). The intended audience are researchers (PhD candidates, Post Doctoral Fellows, Researchers, Associate Professors and Professors) that are planning to submit a grant application for a research project. Max. number of participants is 35. How-to generate a data management plan for a Life Science research project that will meet the requirements of the funding organisations? [Ingrid Heggland](https://www.ntnu.edu/employees/ingrid.heggland) (ResearchData@NTNU), [Ane M Gabrielsen](https://www.ntnu.no/ansatte/ane.gabrielsen) (ResearchData@NTNU), [Heine Skipenes](https://www.ntnu.no/ansatte/heine.skipenes) (Research IT NTNU), [Anne Heidi Skogholt](https://www.ntnu.edu/employees/anne.heidi.skogholt) (NTNU/HUNT-Cloud), [Kjersti Rise](https://www.ntnu.edu/employees/anne.heidi.skogholt) (NTNU/ELIXIR-Norway) and [Korbinian Bösl](https://www.uib.no/en/persons/Korbinian.Boesl) (UiB/ELIXIR-Norway/Centre for Digital Life Norway) ## Course content: #### 30.11.2020 ##### 0900 - 0915 Introduction ##### 0915 - 0945 Requirements from institutions & funding bodies NTNU H2020/ERC Research Council Norway ##### 0945 - 1015 Information on national and local storage infrastructures NeLS/StoreBioInfo NIRD NTNU Computing & Storage resources TSD HUNT-Cloud NICE-1 ##### 1015 - 1030 Short break ##### 1030 - 1230 Relevant deposition repositories/ data archives domain specific archives (ELIXIR/EMBL-EBI, NCBI) NIRD archive NTNU Open Research Data/ DataverseNO NSD #### 1.12.2020 ##### 0900 - 1000 GDPR and other legal requirements for research on humans Health Research Act Personal Data Act ##### 1000 - 1015 Short break ##### 1015 - 1045 Licensing of data, biological material and software ##### 1045 - 1300 Hands on training and assistance to generate a data management plan #### Requirements: Join us online and bring your research project if you have one. You will get the opportunity to set up a data management plan for your project with help of the [Data Steward Wizard tool](https://elixir-no.ds-wizard.org/dashboard) using a structured and detailed questionnaire with references to relevant resources. [Register before 25 November 2020](https://skjemaker.app.uib.no/view.php?id=9329496) 2020-11-30 09:00:00 UTC 2020-12-01 13:00:00 UTC ELIXIR Norway, Centre for Digital Life Norway and Research Data@NTNU Data management Data security Data submission, annotation and curation Norwegian University of Science and Technology korbinian.bosl@uib.no Centre for Digital Life Norway (DLN) PhD studentsPost DocsAll postgraduatesProfessors 35 workshops_and_courses first_come_first_served DMPData management plandata management

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