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  • Nuclear structure and dynamics

    28 September - 2 October 2011

    LIsle sur la Sorgue, France

    Nuclear structure and dynamics https://tess.elixir-europe.org/events/nuclear-structure-and-dynamics 2011-09-28 09:00:00 UTC 2011-10-02 00:00:00 UTC EMBO Domaine de Mousquety, LIsle sur la Sorgue, France Domaine de Mousquety LIsle sur la Sorgue France Genomics [] [] [] meetings_and_conferences [] SystemsBiologyTranscriptomics
  • Genomic resequencing

    4 - 5 April 2012

    Nijmegen, Netherlands

    Genomic resequencing https://tess.elixir-europe.org/events/genomic-resequencing 2012-04-04 23:00:00 UTC 2012-04-05 23:00:00 UTC UMC Radboud, Nijmegen, Netherlands UMC Radboud Nijmegen Netherlands Genomics Bioinformatics [] [] [] workshops_and_courses [] Diagnosis
  • Innovative Sample Prep and Target Enrichment in Clinical Diagnostics - 2012

    18 - 19 April 2012

    Newport beach, United States of America

    Innovative Sample Prep and Target Enrichment in Clinical Diagnostics - 2012 https://tess.elixir-europe.org/events/innovative-sample-prep-and-target-enrichment-in-clinical-diagnostics-2012 2012-04-18 09:00:00 UTC 2012-04-19 00:00:00 UTC Cambridge Healthtech Institute Hyatt Regency, Newport beach, United States of America Hyatt Regency Newport beach United States of America Medicine Genomics [] [] [] meetings_and_conferences [] Diagnosis
  • Diagnostic Applications of Exosomes

    10 - 11 May 2012

    London, United Kingdom

    Diagnostic Applications of Exosomes https://tess.elixir-europe.org/events/diagnostic-applications-of-exosomes 2012-05-10 00:00:00 UTC 2012-05-11 00:00:00 UTC Select Biosciences Dexter House, London, United Kingdom Dexter House London United Kingdom Transcriptomics Physiology [] [] [] meetings_and_conferences [] Diagnosis
  • Circulating Tumour Cells

    10 - 11 May 2012

    London, United Kingdom

    Circulating Tumour Cells https://tess.elixir-europe.org/events/circulating-tumour-cells 2012-05-10 00:00:00 UTC 2012-05-11 00:00:00 UTC Select Biosciences Dexter House, London, United Kingdom Dexter House London United Kingdom Physiology Pathology Medicine [] [] [] meetings_and_conferences [] Diagnosis
  • Executive Summit: Drug-Diagnostic Co-Development

    21 - 23 May 2012

    Philadelphia, United States of America

    Executive Summit: Drug-Diagnostic Co-Development https://tess.elixir-europe.org/events/biomarkers-in-drug-development 2012-05-21 09:00:00 UTC 2012-05-23 00:00:00 UTC Cambridge Healthtech Institute Loews Philadelphia Hotel, Philadelphia, United States of America Loews Philadelphia Hotel Philadelphia United States of America Pharmacology Medicine [] [] [] meetings_and_conferences [] Diagnosis
  • Biomarkers in Molecular Diagnostics

    21 - 23 May 2012

    Philadelphia, United States of America

    Biomarkers in Molecular Diagnostics https://tess.elixir-europe.org/events/biomarkers-in-molecular-diagnostics 2012-05-21 09:00:00 UTC 2012-05-23 00:00:00 UTC Cambridge Healthtech Institute Loews Philadelphia Hotel, Philadelphia, United States of America Loews Philadelphia Hotel Philadelphia United States of America [] [] [] meetings_and_conferences [] Diagnosis
  • Advances in Clinical Genome Sequencing, Diagnostics and Interpretation

    12 - 13 June 2012

    San Francisco, United States of America

    Advances in Clinical Genome Sequencing, Diagnostics and Interpretation https://tess.elixir-europe.org/events/advances-in-clinical-genome-sequencing-diagnostics-and-interpretation 2012-06-12 09:00:00 UTC 2012-06-13 00:00:00 UTC Cambridge Healthtech Institute Hotel Kabuki, San Francisco, United States of America Hotel Kabuki San Francisco United States of America Genomics Bioinformatics [] [] [] meetings_and_conferences [] Diagnosis
  • Resources for Computational Drug Discovery

    2 - 6 July 2012

    Hinxton, United Kingdom

    Resources for Computational Drug Discovery https://tess.elixir-europe.org/events/resources-for-computational-drug-discovery-8d8565b8-5430-4a4f-8959-9463fbd1591e 2012-07-02 00:00:00 UTC 2012-07-06 00:00:00 UTC Wellcome Trust Wellcome Trust Genome Campus, Hinxton, United Kingdom Wellcome Trust Genome Campus Hinxton United Kingdom [] [] [] meetings_and_conferences [] drugdiscovery
  • Mass Spectrometry in Clinical Diagnostics

    21 - 22 August 2012

    Washington, United States of America

    Mass Spectrometry in Clinical Diagnostics https://tess.elixir-europe.org/events/mass-spectrometry-in-clinical-diagnostics 2012-08-21 09:00:00 UTC 2012-08-22 00:00:00 UTC Cambridge Healthtech Institute Hyatt Regency Washington on Capitol Hill, Washington, United States of America Hyatt Regency Washington on Capitol Hill Washington United States of America Proteomics [] [] [] meetings_and_conferences [] Diagnosis
  • Quality Control – From Molecules to Organelles

    19 September - 22 October 2012

    Heidelberg, Germany

    Quality Control – From Molecules to Organelles https://tess.elixir-europe.org/events/quality-control-from-molecules-to-organelles 2012-09-19 00:00:00 UTC 2012-10-22 00:00:00 UTC EMBL Heidelberg European Molecular Biology Laboratory, Heidelberg, Germany European Molecular Biology Laboratory Heidelberg Germany Proteomics Genomics [] [] [] meetings_and_conferences [] Transcriptomics
  • The Complex Life of mRNA

    8 - 11 October 2012

    Heidelberg, Germany

    The Complex Life of mRNA https://tess.elixir-europe.org/events/the-complex-life-of-mrna-9b8c002c-8adf-488c-bec3-d5470bcb09cc 2012-10-08 00:00:00 UTC 2012-10-11 00:00:00 UTC EMBL Heidelberg European Molecular Biology Laboratory, Heidelberg, Germany European Molecular Biology Laboratory Heidelberg Germany Genomics [] [] [] meetings_and_conferences [] Transcriptomics
  • 2nd Prato Conference on the Pathogenesis of Bacterial Diseases of Animals

    10 - 13 October 2012

    Prato, Italy

    2nd Prato Conference on the Pathogenesis of Bacterial Diseases of Animals https://tess.elixir-europe.org/events/2nd-prato-conference-on-the-pathogenesis-of-bacterial-diseases-of-animals 2012-10-10 00:00:00 UTC 2012-10-13 00:00:00 UTC ASN events The Monash University Prato Centre, Prato, Italy The Monash University Prato Centre Prato Italy [] [] [] meetings_and_conferences [] drugdiscovery
  • Global Discovery to Development Innovation Leaders Summit

    23 - 24 October 2012

    Philadelphia, United States of America

    Global Discovery to Development Innovation Leaders Summit https://tess.elixir-europe.org/events/global-discovery-to-development-innovation-leaders-summit 2012-10-23 09:00:00 UTC 2012-10-24 00:00:00 UTC Gbx Summits The Westin Hotel, Philadelphia, United States of America The Westin Hotel Philadelphia United States of America Medicine [] [] [] meetings_and_conferences [] drugdiscovery
  • Realizing the value of plant natural products: from metabolic engineering to biorefining

    16 November 2012

    Stevenage, United Kingdom

    Realizing the value of plant natural products: from metabolic engineering to biorefining https://tess.elixir-europe.org/events/realizing-the-value-of-plant-natural-products-from-metabolic-engineering-to-biorefining 2012-11-16 00:00:00 UTC 2012-11-16 00:00:00 UTC EuroSciCon The Stevenage Bioscience Catalyst, Stevenage, United Kingdom The Stevenage Bioscience Catalyst Stevenage United Kingdom [] [] [] meetings_and_conferences [] drugdiscovery
  • Cybertaxonomy and biodiversity information with special emphasis on geospatial related data (Novice or Advanced Training)

    1 December 2012

    Tervuren, Belgium

    Cybertaxonomy and biodiversity information with special emphasis on geospatial related data (Novice or Advanced Training) https://tess.elixir-europe.org/events/cybertaxonomy-and-biodiversity-information-with-special-emphasis-on-geospatial-related-data-novice-or-advanced-training 2012-12-01 00:00:00 UTC 2012-12-01 00:00:00 UTC Distributed European School of Taxonomy Royal Museum for Central Africa, Tervuren, Belgium Royal Museum for Central Africa Tervuren Belgium Bioinformatics [] [] [] workshops_and_courses [] TranscriptomicsBiodiversityInformation
  • BioFIT (Fostering Innovation and Transfer)

    3 - 4 December 2012

    Lille, France

    BioFIT (Fostering Innovation and Transfer) https://tess.elixir-europe.org/events/biofit-fostering-innovation-and-transfer 2012-12-03 09:00:00 UTC 2012-12-04 00:00:00 UTC BioFIT Lille, France Lille France [] [] [] meetings_and_conferences [] drugdiscovery
  • CGS – The Cancer Genome Summit

    4 - 6 December 2012

    Boston, United States of America

    CGS – The Cancer Genome Summit https://tess.elixir-europe.org/events/cgs-the-cancer-genome-summit 2012-12-04 09:00:00 UTC 2012-12-06 00:00:00 UTC Hanson Wade Boston, United States of America Boston United States of America Medicine Genomics [] [] [] meetings_and_conferences [] drugdiscovery
  • Protein-Protein Interactions

    17 - 18 April 2013

    San Diego, United States of America

    Protein-Protein Interactions https://tess.elixir-europe.org/events/protein-protein-interactions-8bd48b7e-9908-49f1-bac8-94f16812d42e 2013-04-17 09:00:00 UTC 2013-04-18 00:00:00 UTC Cambridge Healthtech Institute Hilton San Diego Resort & Spa, San Diego, United States of America Hilton San Diego Resort & Spa San Diego United States of America Proteomics [] [] [] meetings_and_conferences [] drugdiscovery
  • The Complex Life of mRNA

    5 - 8 October 2014

    Heidelberg, Germany

    The Complex Life of mRNA https://tess.elixir-europe.org/events/the-complex-life-of-mrna 2014-10-05 01:00:00 UTC 2014-10-08 01:00:00 UTC EMBO/EMBL European Molecular Biology Laboratory, Heidelberg, Germany European Molecular Biology Laboratory Heidelberg Germany Genomics [] [] [] meetings_and_conferences [] Transcriptomics
  • Protein-Protein Interactions

    19 - 20 April 2016

    San Diego, United States of America

    Protein-Protein Interactions https://tess.elixir-europe.org/events/protein-protein-interactions 2016-04-19 01:00:00 UTC 2016-04-20 01:00:00 UTC Cambridge Healthtech Institute Hilton San Diego Resort & Spa, San Diego, United States of America Hilton San Diego Resort & Spa San Diego United States of America Proteomics [] [] [] meetings_and_conferences [] drugdiscovery
  • Resources for Computational Drug Discovery

    7 - 11 November 2016

    Hinxton, United Kingdom

    Resources for Computational Drug Discovery https://tess.elixir-europe.org/events/resources-for-computational-drug-discovery 2016-11-07 00:00:00 UTC 2016-11-11 00:00:00 UTC EMBL-EBI Wellcome Trust Genome Campus, Hinxton, United Kingdom Wellcome Trust Genome Campus Hinxton United Kingdom Bioinformatics [] [] [] workshops_and_courses [] drugdiscovery
  • Revolutionizing Next-Generation Sequencing (2nd edition)

    20 - 21 March 2017

    Antwerpen, Belgium

    Elixir node event
    Revolutionizing Next-Generation Sequencing (2nd edition) https://tess.elixir-europe.org/events/revolutionizing-next-generation-sequencing-2nd-edition Revolutionizing Next-Generation Sequencing (2nd edition) A VIB Tools & Technologies Conference Enabled by better cost-performance curves and novel technology developments, Next-Generation Sequencing technologies keep on pushing the boundaries of our scientific knowledge. The NGS-field is still expanding and to take advantage of new opportunities offered by these technologies in life sciences, VIB Conferences will host the second edition of Revolutionizing Next-Generation Sequencing: Tools and Technologies. After a sold-out 2015 edition, RNGS17 will look at emerging tools and approaches for: Large-scale Sequencing Applications for Current and Emerging Next-Generation Sequencing Platforms Single-Cell Genomics Epigenetics Next-gen Transcriptomics technologies Ultra-long reads and Assembly Computational genomics and data analysis In addition to a great scientific and technology program, the conference will provide ample opportunities to network during the breaks, poster sessions, the conference dinner and our ‘Meet the Expert’ session! You can find more info about the sold out first edition in our event archive. 2017-03-20 08:45:00 UTC 2017-03-21 17:45:00 UTC VIB Conferences Koningin Astridplein 20, 20, Koningin Astridplein, Antwerpen, Belgium Koningin Astridplein 20, 20, Koningin Astridplein Antwerpen Anwerpen Belgium 2018 Epigenomics VIB www.vibconferences.be conferences@vib.be Bluebee Covaris Perkin Elmer SeqLL BD Bioké Diagenode Labcyte Multiplicom Takara Westburg To see all our sponsors please visit www.vibconferences.be PhD'sAcademicsPost-DocsIndustry meetings_and_conferences first_come_first_served Structural genomicsPreclinical and clinical studiesclinical sequencingPopulation geneticsSingle Cell GenomicsDNA-seqSequencingApplied NGSEpigenomicsGenome structureGenome MappingTranscriptomicsData Analysis
  • Genopole Summer School

    4 - 7 July 2017

    Seine-Port, France

    Elixir node event
    Genopole Summer School https://tess.elixir-europe.org/events/bioinformatic-and-biostatistic-tools-in-medical-genomics Bioinformatic and Biostatistic tools in medical genomics 2017-07-04 09:00:00 UTC 2017-07-07 00:00:00 UTC Genopole, IFB and France Genomique Châteauform' Seine Port (77), Seine-Port, France Châteauform' Seine Port (77) Seine-Port Seine-et-Marne France 77240 Medicines research and development Metagenomics Functional genomics [] goo.gl/bzEdQ2 [] BioinformaticiansResearcher in life sciences workshops_and_courses first_come_first_served Statistical-model Variant-callingSNPbioinformaticsBiomarker discoverymetagenomicsNext generation sequencing data analysisWorkflowscomputer-science
  • 3Gb-TEST NGS Course Ljubljana 2017

    25 - 27 September 2017

    Ljubljana, Slovenia

    3Gb-TEST NGS Course Ljubljana 2017 https://tess.elixir-europe.org/events/3gb-test-ngs-in-a-diagnostic-setting A 3-day course on NGS Ljubljana, Slovenia in the period of 25-27 September 2017. The focus of the course is on clinical diagnostics using exome/genome sequences, variant identification and analysis including afternoon practical sessions. 2017-09-25 08:00:00 UTC 2017-09-27 18:00:00 UTC 3Gb-TEST Best Western Premier Hotel Slon, Ljubljana, Slovenia Best Western Premier Hotel Slon Ljubljana Slovenia Sequencing Exome sequencing Sequence analysis [] J.A.Lopez_Hernandez@lumc.nl In collaboration with RD-Connect [] 100 workshops_and_courses registration_of_interest NGSDiagnosisWESWGSELSI
  • 3Gb-TEST NGS Course Mexico 2017

    10 - 13 October 2017

    México City, Mexico

    3Gb-TEST NGS Course Mexico 2017 https://tess.elixir-europe.org/events/3gb-test-ngs-course-mexico-2017 The focus of the course is on clinical diagnostics using exome/genome sequences, variant identification and analysis including afternoon practical sessions in dry lab as well as in wetlab. *Event mostly in Spanish 2017-10-10 08:00:00 UTC 2017-10-13 14:30:00 UTC 3Gb-TEST Centro Médico Nacional 20 de Noviembre, México City, Mexico Centro Médico Nacional 20 de Noviembre México City DF Mexico Data quality management Whole genome sequencing Exome sequencing Bioinformatics ISSSTE genomicatraslacional@gmail.com [] [] 200 workshops_and_courses [] NGS bioinformaticsNGSDiagnosisDatabases
  • H3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 1

    20 August 2018

    H3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 1 https://tess.elixir-europe.org/events/h3abionet-2018-genotyping-chip-data-analysis-and-gwas-lecture-series #### Computational requirements for running the H3ABioNet GWAS workflows The first of a series of seven online lectures for Genome Wide Association Studies (GWAS) will cover the technical requirements for setting up a your computational environment for running the H3ABioNet GWAS workflows. In this inaugural lecture of the series, Prof. Hazelhurst will cover the the following topics: Installing and using Nextflow Installing and using Github Use of containers for packaging and running tools Pulling the GWAS pipeline from Github and running it As this lecture aims to provide attendees with an environment to the run the H3ABioNet GWAS workflow at their own pace, there are some preliminary software requirements: Either a Linux machine or an Apple running macOS Ideally you should have machine with at least 2-4 cores and 8GB of RAM. Java 8 Nextflow installed (see installation instructions at https://www.nextflow.io/) Python 3 Please also install either Docker OR the following dependencies using pip3: Pandas, Matplotlib, Openpyxl, SciPy, NumPy PLINK 1.9 [Please also refer to the following documentation to obtain the H3ABioNet GWAS workflow]: https://github.com/h3abionet/h3agwas/blob/master/README.md 2018-08-20 15:00:00 UTC 2018-08-20 16:30:00 UTC H3ABioNet Population genomics Genotyping experiment Computational biology Workflows GWAS study Bioinformatics H3ABioNet info@h3abionet.org H3ABioNet Anyone intersted in GWAS and using the H3Africa genotyping chipAnyone who wants to learn more about GWAS workshops_and_courses [] NextflowDockerH3ABioNetGWASWorkflowsGenotyping array analysis bioinformaticsAfricaPopulation GenomicsReproducible ScienceH3Africa genotyping arrayHigh performance computingCloud computingGWAS workflowH3ABioNet GWAS 2018 Lecture Series
  • H3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 2

    22 August 2018

    H3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 2 https://tess.elixir-europe.org/events/h3abionet-2018-genotyping-chip-data-analysis-and-gwas-lecture-series-4a0ce1cc-f48d-4f1e-98b5-2bfc55abce6a ### Overview of Genome Wide Association Studies and study designs The second of a series of seven online lectures for Genome Wide Association Studies (GWAS) will provide a basic overview on genome-wide association studies (GWAS). This is timely with the H3Africa genotyping data becoming available for several of the H3Africa research groups. To enable genomic research, the H3Africa Consortium had to build some of its own resources. This has involved sequencing whole genomes from selected under-represented African populations, analyzing the data to identify common genetic variation across major groups and developing a unique GWAS array, enriched for common African variation. The H3Africa SNP genotyping array, is currently the best-suited array available for African genome-wide association studies. What does it take to develop a genome study to understand genetic and environmental contributions to complex disease traits? This GWAS lecture will cover the research process from protocol development to data quality control and GWAS analysis approaches. It will include the two main study designs: Case : control (e.g. diabetes, hypertension, kidney disease) Continuous trait (e.g. LDL-Cholesterol, body mass index, height) GWAS. I will discuss the basic building blocks of a GWAS study, the different study designs, power of a study to detect genetic association (based in sample size, allele frequency and expected effect size), and replication studies. The advantages and disadvantages of doing GWAS in African populations will be discussed. 2018-08-22 15:00:00 UTC 2018-08-22 17:00:00 UTC H3ABioNet Genotyping experiment Population genetics Population genomics GWAS study H3ABioNet info@h3abionet.org H3ABioNet Anyone intersted in GWAS and using the H3Africa genotyping chip workshops_and_courses [] H3ABioNetGWASH3AfricaH3Africa genotyping arrayAfrican populationsStudy designAWI-GENAfrican genomicsPopulations GenomicsGenetic DiversityH3Africa genotyping arrayCase Control studyGenotypesComplex traitsGWAS study designsAllelic associationGenotype associationGWAS workflowQuantitative traitsSample sizeCommon and rare variantsAfrican genome structureH3ABioNet GWAS 2018 Lecture Series
  • H3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 3

    27 August 2018

    H3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 3 https://tess.elixir-europe.org/events/h3abionet-2018-genotyping-chip-data-analysis-and-gwas-lecture-series-lecture-3 ### Genotype calling from Illumina files The third of a series of seven H3ABioNet online lectures for Genome Wide Association Studies (GWAS) will introduce genotyping SNP array chips with particular emphasis on the H3Africa genotype chip. The lecture will cover common file formats when obtaining genotyping chip data from a service provider such as Illumina and software used for genotype calling. This lecture will also cover genotype calling, sample and probe quality control, probe viewing and exporting of data using GenomeStudio. Converting the data to PLINK format and some tips on troubleshooting and common pitfalls will be discussed. 2018-08-27 15:00:00 UTC 2018-08-27 16:00:00 UTC H3ABioNet Population genomics Bioinformatics Genotyping experiment Genomics Computational biology H3ABioNet info@h3abionet.org H3ABioNet Anyone intersted in GWAS and using the H3Africa genotyping chip 150 workshops_and_courses [] Genotype callingH3ABioNetGenotype callingGenome StudioH3Africa genotyping arrayAfrican populationsArray processingIllumina arraysFile formatsAnnotationsNon-polymorphicTop/Bottom annotationGenotype array probesIntensitiesConvert to PLINK format BioinformaticsGenome Wide Association Studies
  • H3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 5

    3 September 2018

    H3ABioNet 2018 Genotyping Chip Data Analysis and GWAS lecture series - Lecture 5 https://tess.elixir-europe.org/events/h3abionet-2018-genotyping-chip-data-analysis-and-gwas-lecture-series-ce96b48a-423a-435c-beae-9ddfcaba38a6 ### Population structure in GWAS The fifth of a series of seven H3ABioNet online lectures for Genome Wide Association Studies (GWAS) will introduce the concept of population structure/stratification (PS) and suggest why it is critical to consider PS in a GWAS. The lecture will begin by familiarizing the types of PS that are encountered and explain the factors that could cause them to appear in a GWAS dataset. It will then cover the methods that are commonly used to identify PS in a dataset and finally discuss the available computational approaches to correct for PS in a GWAS. Date: 3rd September 2018 Time: 2pm WAT / 3pm CAT / 4pm EAT [Url to join the lecture]: http://meeting.uct.ac.za/h3abionet_gwas/ 2018-09-03 15:00:00 UTC 2018-09-03 16:30:00 UTC H3ABioNet Genotyping experiment Bioinformatics GWAS study Population genetics Population genomics H3ABioNet info@h3abionet.org H3ABioNet Anyone intersted in GWAS and using the H3Africa genotyping chip 150 meetings_and_conferencesworkshops_and_courses first_come_first_served Population structureGWASCorrect for population structureH3ABioNetH3AfricaAWI-GEN
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