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  • Genome assembly using Galaxy

    2 - 3 August 2017

    Australia

    Genome assembly using Galaxy https://tess.elixir-europe.org/events/genome-assembly-using-galaxy 2017-08-02 09:00:00 UTC 2017-08-03 12:30:00 UTC QFAB Bioinformatics Room 3.141, Queensland Bioscience Precinct, The University of Queensland, Australia Room 3.141, Queensland Bioscience Precinct, The University of Queensland Brisbane Australia Bioinformatics University of Queensland [] [] workshops_and_courses [] Genome AssemblyGalaxy
  • Introduction to long-read genome assembly

    22 March 2018

    Carlton, Australia

    Introduction to long-read genome assembly https://tess.elixir-europe.org/events/introduction-to-long-read-genome-assembly 2018-03-22 13:30:00 UTC 2018-03-22 16:30:00 UTC Melbourne Bioinformatics Melbourne Bioinformatics, 187 Grattan St, Carlton, Australia Melbourne Bioinformatics, 187 Grattan St Carlton Australia 3053 Bioinformatics University of Melbourne [] [] workshops_and_courses [] Genome Assembly
  • Docker Advanced Course

    26 - 27 September 2018

    Milano, Italy

    Docker Advanced Course https://tess.elixir-europe.org/events/docker-advanced-course Docker is used to run “containers” that are essentially lightweight virtual machines. Containers are isolated from each other and use their own set of tools and libraries; they can communicate through well-defined channels. This allows to easily deploy programs since all requisites of a program are stored inside the containers. This course will provide the basic notions and tool to allow a developer to “dockerize” her programs, and to manage a set of containers, hence greatly improving the installation process. 2018-09-26 09:00:00 UTC 2018-09-27 18:00:00 UTC Gianluca Della Vedova (Department of Computer Science, University of Milano-Bicocca, IT), Loredana Le Pera (ELIXIR-IIB Training Coordinator Deputy, IBIOM-CNR, IT), Allegra Via (ELIXIR-IIB Training Coordinator, IBPM-CNR, IT) Via Bicocca degli Arcimboldi, 8, Lab. 715, U7 Building, Milano, Italy Via Bicocca degli Arcimboldi, 8, Lab. 715, U7 Building Milano Città Metropolitana di Milano Italy 20126 Computer science Bioinformatics University of Milano-Bicocca, Italy gianluca.dellavedova@unimib.it [] DevelopersDevOps in any field 20 workshops_and_courses first_come_first_servedregistration_of_interest DockerContainersVirtual machine
  • Introduction to long-read genome assembly

    5 April 2019

    Melbourne, Australia

    Introduction to long-read genome assembly https://tess.elixir-europe.org/events/introduction-to-long-read-genome-assembly-c43a1031-7b9c-4893-8b28-7844d2bc1741 2019-04-05 09:00:00 UTC 2019-04-05 17:00:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Australia Bioinformatics University of Melbourne [] [] [] [] bioinformaticsGalaxyGenome Assembly
  • Docker and Reproducibility

    13 - 14 June 2019

    Torino, Italy

    Docker and Reproducibility https://tess.elixir-europe.org/events/docker-and-reproducibility Docker is a container framework for Linux that allows a developer to make easier the creation, deployment and execution of applications by using containers. During the workshop the participant will learn the core concepts of Docker and how to easily embed bioinformatic pipelines/workflows into a docker container. By the end of this course, the participants will learn: - the basic concepts of Docker; - to assess the advantages of a containerized software development & deployment; - to use Docker engine features necessary for running containerized applications; - how to use the Docker File and Docker Hub to create a Docker image; - the various networking mechanisms available in Docker. 2019-06-13 09:00:00 UTC 2019-06-14 18:00:00 UTC ELIXIR-IIB, CNR, University of Turin University of Turin, Molecular Biotechnology Center, Torino, Italy University of Turin, Molecular Biotechnology Center Torino Città Metropolitana di Torino Italy 10126 Bioinformatics Computer science University of Turin elixir.ita.training@gmail.com [] bioinformaticiansBiologists, Genomicists, Computer ScientistsPhD and graduate students, young researchers and PIs in the life science and computational biology field 15 workshops_and_courses first_come_first_served DockerContainersReproducibilitycomputer-science
  • 4th European Conference on Translational Bioinformatics - ECTB2019

    11 - 12 November 2019

    Granada, Spain

    Elixir node event
    4th European Conference on Translational Bioinformatics - ECTB2019 https://tess.elixir-europe.org/events/4th-european-conference-on-translational-bioinformatics-ectb2019 We are pleased to present the 4th European Conference on Translational Bioinformatics: Biomedical Big Data Supporting Precision Medicine (#ECTB2019). The fourth ECTB edition follows the successful precedent of previous editions organized in 2016 at the University of Copenhagen, Denmark, in 2017 at the European Bioinformatics Institute, UK and in 2018 at the Barcelona Biomedical Research Park (PRBB). ECTB2019 will bring together researchers, clinicians, developers, and companies interested in exchanging experiences on the translation of research and innovative developments into healthcare tools and services based on genomics and bioinformatics applications. The conference is organised in collaboration with the University of Granada, Fundación Progreso y Salud (FPS) and the Spanish National Bioinformatics Institute (INB/ELIXIR-ES). 2019-11-11 10:15:00 UTC 2019-11-12 16:00:00 UTC University of Granada, Fundación Progreso y Salud (FPS) and the Spanish National Bioinformatics Institute (INB/ELIXIR-ES) Facultad de Medicina de la Universidad de Granada, 11, Avenida de la Investigación, Granada, Spain Facultad de Medicina de la Universidad de Granada, 11, Avenida de la Investigación Granada Spain Biomedical science Genomics Bioinformatics Translational medicine University of Granada [] ResearchersCliniciansDevelopersCompanies meetings_and_conferences [] Translational researchTranslational Bioinformaticsbiomedical applicationsBig DataPrecision MedicineGenomicsBioinformaticsClinical BioinformaticstoolsservicesHealthcareApplications
  • Advances in Computational Biology Conference 2019

    28 - 29 November 2019

    Barcelona, Spain

    Elixir node event
    Advances in Computational Biology Conference 2019 https://tess.elixir-europe.org/events/advances-in-computational-biology-conference-2019 The first **Advances in Computational Biology conference – _Fostering collaboration among women scientists_** will bring together researchers working on systems biology, omics technologies, artificial intelligence and high-performance computing with applications to biology from both the public and private sectors. One of the main purposes of the conference is to **visualize and promote the research done by women scientists** and for this reason, all presenters will be women, although the conference is open to everyone. We want to create a space to foster collaborations between scientists, providing an excellent opportunity to share ideas and build research networks. Topics included: - **Learning from Biological Sequences**: population genomics, evolutionary genomics, systems biology, transcriptomics, sequence analysis - **When Computational Biology meets Medicine**: biomedical applications, mutational landscapes, clinical genomics - **Machines Speeding up Research**: high performance computing, machine learning in the life sciences, imaging data analysis, dynamic simulations and algorithm development Key dates: - Open registration: May 6th, 2019 - Abstract submission opens: May 6th, 2019 - **Abstract submission deadline: July 1st, 2019** - Early bird registration deadline: September 15th, 2019 - Registration deadline: November 1st, 2019 - AdvCompBio Conference: November 28th - 29th, 2019 The programme will include poster and oral presentations, as well as keynotes from leading scientists in the computational biology and high-performance computing fields. The keynote speakers of the conference are: **Christine Orengo**, group leader of Orengo Group at University College London, **Natasa Przulj**, group leader of the Life Sciences – Integrative Computational Network Biology at the Barcelona Supercomputing Center and **Marie-Christine Sawley**, director of the Exascale Lab at Intel. The confirmed chairs of the conference are: **Alison Kennedy**, director of the STFC Hartree Centre, **Janet Kelso**, group leader of the Minerva Research Group for Bioinformatics at the Max Planck Institute for Evolutionary Anthropology, and **Nuria Lopez-Bigas**, leader of the Biomedical Genomics Research Group at the Institute for Research in Biomedicine Barcelona. Furthermore, the participants will have the opportunity to interact personally with female leaders in the fields of IT, academic research and politics that support the conference. The conference is organised by the Bioinfo4Women programme from the Barcelona Supercomputing Center (BSC-CNS) with the collaboration of IMIM-UPF Research Programme on Biomedical Informatics (GRIB), the Spanish National Bioinformatics Institute (INB/ELIXIR-ES) and the Universitat Politècnica de Catalunya (UPC). It is an affiliate conference of the International Society for Computational Biology (ISCB). 2019-11-28 09:00:00 UTC 2019-11-29 17:00:00 UTC La Pedrera, 92, Passeig de Gràcia, Barcelona, Spain La Pedrera, 92, Passeig de Gràcia Barcelona Barcelona Spain Imaging Machine learning Computational biology Computer science Biomedical science Sequence analysis Transcriptomics Evolutionary biology Population genomics Omics Systems biology Bioinformatics [] [] ResearchersPhD studentsPostdoctoral studentsComputer scienceComputational biologistsbioinformaticians meetings_and_conferences [] HPCBioinformaticsComputational BiologyArtificial IntelligenceGenomicsTranscriptomicsSystems biologyPopulation GenomicsEvolutinary genomicsSequence Analysisbiomedical applicationsmutational landscapesclinical genomicsImagingdynamic simulationsalgorithmsmachine learning
  • WEBINAR SERIES: Using Containers in Bioinformatics

    15 - 17 June 2020

    Australia

    WEBINAR SERIES: Using Containers in Bioinformatics https://tess.elixir-europe.org/events/webinar-series-using-containers-in-bioinformatics Three-day online event in Australia 2020-06-15 02:00:00 UTC 2020-06-17 03:00:00 UTC Australian Biocommons; Pawsey Supercomputing Centre Australia, Australia Australia Australia Bioinformatics Australian Biocommons [] [] workshops_and_courses [] BioinformaticsContainersAustralia
  • WEBINAR: So you think your genome assembly is good enough?

    24 September 2020

    Australia

    WEBINAR: So you think your genome assembly is good enough? https://tess.elixir-europe.org/events/webinar-so-you-think-your-genome-assembly-is-good-enough 2020-09-24 16:00:00 UTC 2020-09-24 18:00:00 UTC Australian BioCommons Australia Australia Bioinformatics Australian Biocommons [] [] [] [] bioinformaticsGenome Assembly

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