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  • Software Carpentry - University of Manchester

    7 - 8 November 2016

    Software Carpentry - University of Manchester https://tess.elixir-europe.org/events/software-carpentry-university-of-manchester Find out more at https://anenadic.github.io/2016-11-07-manchester/ 2016-11-07 09:00:00 UTC 2016-11-08 00:00:00 UTC Software Carpentry University of Manchester University of Manchester Greater Manchester Computer science Bioinformatics University of Manchester Please email a.nenadic@manchester.ac.uk or andy.brass@manchester.ac.uk for more information. Software Sustainability Institute Graduate Students workshops_and_courses first_come_first_served ProgrammingPython
  • Introduction to Unix

    9 August 2017

    Sydney, Australia

    Introduction to Unix https://tess.elixir-europe.org/events/introduction-to-unix-6581cad8-4471-413c-9c69-af92ed0034d0 2017-08-09 09:30:00 UTC 2017-08-09 16:30:00 UTC Intersect Australia USYD Camperdown, CPC Room 60.03, Level 6, Charles Perkins Centre D17, Sydney, Australia USYD Camperdown, CPC Room 60.03, Level 6, Charles Perkins Centre D17 Sydney Australia Bioinformatics University of Sydney [] [] workshops_and_courses [] ProgrammingUnix
  • Introduction to Programming with MATLAB

    6 September 2017

    Sydney, Australia

    Introduction to Programming with MATLAB https://tess.elixir-europe.org/events/introduction-to-programming-with-matlab 2017-09-06 09:30:00 UTC 2017-09-06 16:30:00 UTC Intersect Australia USYD Camperdown, Jacaranda Training Room, Level 3, G12 Services Building , Sydney, Australia USYD Camperdown, Jacaranda Training Room, Level 3, G12 Services Building Sydney Australia Bioinformatics University of Sydney [] [] workshops_and_courses [] MatlabProgramming
  • Software Carpentry - Introduction to Matlab

    30 November 2017

    Bundoora, Australia

    Software Carpentry - Introduction to Matlab https://tess.elixir-europe.org/events/software-carpentry-introduction-to-matlab 2017-11-30 09:30:00 UTC 2017-11-30 16:30:00 UTC Intersect Australia La Trobe University, Melbourne Campus, Plenty Road, Bundoora, Australia La Trobe University, Melbourne Campus, Plenty Road Bundoora Australia Computer science La Trobe University [] [] workshops_and_courses [] ProgrammingMatlab
  • Introduction to Python for Biologists

    19 - 23 February 2018

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to Python for Biologists https://tess.elixir-europe.org/events/introduction-to-python-for-biologists-bcd1d1d1-24fc-47b6-b586-fc239d27888e Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. This workshop is aimed at complete beginners and assumes no prior programming experience. It gives an overview of the language with an emphasis on practical problem-solving, using examples and exercises drawn from various aspects of bioinformatics work. The workshop is structured so that the parts of the language most useful for bioinformatics are introduced as early as possible, and that students can start writing plausibly-useful programs after the first few sessions. After completing the workshop, students should be in a position to (1) apply the skills they have learned to tackling problems in their own research and (2) continue their Python education in a self-directed way. 2018-02-19 09:00:00 UTC 2018-02-23 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN Bioinformatics Edinburgh Genomics Bert Overduin - bert.overduin@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsProgrammingPython
  • Data Manipulation and Visualisation with Python

    9 - 13 April 2018

    Edinburgh, United Kingdom

    Elixir node event
    Data Manipulation and Visualisation with Python https://tess.elixir-europe.org/events/data-manipulation-and-visualisation-with-python One of the strengths of the Python language is the availability of mature, high-quality libraries for working with scientific data. Integration between the most popular libraries has lead to the concept of a "scientific Python stack": a collection of packages which are designed to work well together. In this workshop we will see how to leverage these libraries to efficiently work with and visualise large volumes of data. 2018-04-09 09:00:00 UTC 2018-04-13 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN Bioinformatics Edinburgh Genomics Bert Overduin - bert.overduin@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsProgrammingPython
  • Advanced Python for Biologists

    9 - 13 July 2018

    Edinburgh, United Kingdom

    Elixir node event
    Advanced Python for Biologists https://tess.elixir-europe.org/events/advanced-python-for-biologists-3fb71294-dcb9-4381-bdae-81701ef20595 Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. This workshop is aimed at people who already have a basic knowledge of Python and are interested in using the language to tackle larger problems. In it, we will look in detail at the parts of the language which are particularly useful in scientific programming, and at the tools Python offers for making development faster and easier. The workshop will use examples and exercises drawn from various aspects of bioinformatics work. After completing the workshop, students should be in a position to (1) take advantage of the advanced language features in their own programs and (2) use appropriate tools when developing software programs. 2018-07-09 09:00:00 UTC 2018-07-13 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN Bioinformatics Edinburgh Genomics Bert Overduin - bert.overduin@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsProgrammingPython
  • Type 2 Immunity in Homeostasis and Disease

    21 - 22 February 2019

    Brugge, Belgium

    Type 2 Immunity in Homeostasis and Disease https://tess.elixir-europe.org/events/type-2-immunity-in-homeostasis-and-disease Type 2 inflammation rich in eosinophils, basophils and mast cells and orchestrated by Th2 lymphocytes has been mainly studied in the context of allergies and immune responses to helminths. Since the discovery of type 2 innate lymphoid cells there has been a strong interest in understanding how type 2 immunity is induced and regulated, for example by barrier epithelial cells. Given the recent introduction of new biologics that target type 2 cytokines to treat severe allergic disease, we are accumulating a lot of new insights on type 2 immune responses in humans as well. This meeting will not only focus on new effector and regulatory mechanisms of the type 2 immune response. It will also offer a number of talks taking a broader look on type 2 immunity, dealing with such topics as type 2 immunity in homeostasis, growth and repair, metabolism, neuro-immune interactions and cancer. Understanding these alternative roles for type 2 immunity will be important to address the benefits and potential pitfalls of long-term inhibition of type 2 immunity by biologicals and could elucidate new therapeutic pathways for very common diseases like asthma, obesity, diabetes and cancer. Abstracts can be submitted for the following topics: Tissue homeostasis and repair Type 2 Neuro-immune axis Type 2 in allergy, asthma & helminth infection Type 2 Immunity & Cancer Deadlines: • Early Bird: 10 January 2019 • Late Registration: 7 February 2019 • Abstract deadline: 19 December 2018 2019-02-21 08:00:00 UTC 2019-02-22 18:00:00 UTC VIB Conferences OLD ST. JOHN SITE, Zonnekemeers, Brugge, Belgium OLD ST. JOHN SITE, Zonnekemeers Brugge West-Vlaanderen Belgium 8000 VIBGhent UniversityCell Press confferences@vib.be Vector Builder [] meetings_and_conferences [] ImmunityCancer, Cancer Biomarkers, Cancer Biomarkers in Clinical Use, Types of Biomarker and Biomarkers, Surgical oncology, Pediatric Oncology, Haematologist-oncology, Gynecologist oncology, Orthopaedic Oncology, Breast Cancer, Neuro-oncology, Pathophysiology of Cancer, Cancer Pharmacology, Cancer Therapeutics, Homeopathy Cancer Treatment Cancer Epigenetics, Cancer: Lifestyle and Nutrition, Cancer Prognosis and Predictive Factor, Cancer Proteomics, Molecular Epidemiology of Cancer, Cancer Nursing and Care, Cancer Diagnosis, Cancer Biopsy, Magnetic Resonance Imaging (MRI),Factors Associated with Cancer Prevalence, Cancer Pharma Industry, Economic Impact on CancerAllergyAsthmaType 2 immunity
  • Summer School in Metabolic Modelling

    3 - 7 June 2019

    Braga, Portugal

    Elixir node event
    Summer School in Metabolic Modelling https://tess.elixir-europe.org/events/summer-school-in-metabolic-modelling This 5-day duration summer school will focus on user-friendly tools for metabolic model reconstruction and simulation and experimental procedures to improve those models. The course is directed to everyone who is interested in learning to use metabolic modelling in their research, using user-friendly tools. No programming skills are required. Course attendants will be participating in activities covering the following topics: - Basic concepts in metabolic modelling - Genome annotation and metabolic model reconstruction with merlin. - KBase: A collaborative, open environment for systems biology of plants, microbes and their communities. - Optflux: an open-source software platform for in silico metabolic engineering. - Experimental determination of biomass composition and its inclusion in genome-scale metabolic models. - Experimental metabolomics analysis using GC-MS and its inclusion in genome-scale metabolic models. 2019-06-03 09:00:00 UTC 2019-06-07 17:00:00 UTC Universidade do Minho University of Minho - Campus of Gualtar, Rua da Universidade, Braga, Portugal University of Minho - Campus of Gualtar, Rua da Universidade Braga Portugal Portugal 4710-057 Braga Universidade do Minho s2m2.course@gmail.com [] everyone who is interested in learning to use metabolic modelling in their research, using user-friendly tools. No programming skills are required. 20 workshops_and_courses registration_of_interest metabolic modelling, Genome, open-source software platform
  • ELIXIR Software Carpentry - CNR, Italy

    3 - 5 July 2019

    Napoli, Italy

    ELIXIR Software Carpentry - CNR, Italy https://tess.elixir-europe.org/events/elixir-software-carpentry-cnr-italy Software Carpentry aims to help researchers get their work done in less time and with less pain by teaching them basic research computing skills. This hands-on workshop will cover basic concepts and tools, including program design, version control, data management, and task automation. Participants will be encouraged to help one another and to apply what they have learned to their own research problems. In particular, in this workshop we will cover the Unix Shell, programming in Python and version control with Git. 2019-07-03 09:00:00 UTC 2019-07-05 17:30:00 UTC Vincenza Colonna, National Research Council - Anna Marabotti, University of Salerno Via Pietro Castellino, 111, Napoli, Italy Via Pietro Castellino, 111 Napoli Città Metropolitana di Napoli Italy 80131 Computer science The National Research Council Italy vincenza.colonna@igb.cnr.it [] Biologists with little or no prior computational experience 25 workshops_and_courses first_come_first_servedregistration_of_interest Software CarpentryGitPythonProgrammingUnix Shell
  • The Brain Mosaic: Cellular heterogeneity in the CNS (2nd edition)

    10 - 11 October 2019

    Leuven, Belgium

    The Brain Mosaic: Cellular heterogeneity in the CNS (2nd edition) https://tess.elixir-europe.org/events/the-brain-mosaic-cellular-heterogeneity-in-the-cns-2nd-edition Recent advances in technology now allow us to explore multiple aspects of heterogeneity at the single cell level. Nowhere is this more important than in the Central Nervous System (CNS), where cellular heterogeneity has profound effects on all aspects of normal brain function and behavior and explains important aspects of disease pathology. With the second edition of the Brain Mosaic conference we aim to bring together leaders in this emerging discipline to discuss how it is advancing our knowledge of CNS function and disease. Speakers at this neuroscience meeting on ‘single cell’ will emphasize the multi-disciplinary nature of the field in several sessions: • Single cell sequencing and cell diversity • Spatial transcriptomics • New developments in technology and bioinformatics • CNS sequencing and relevance to disease research • Connections an activity Poster information: Format: A0 (841 x 1189 mm / 33.1 x 46.8 in), portrait orientation Deadlines: • Early Bird: 8 September 2019 • Late Registration: 26 September 2019 • Abstract deadline: 29 August 2019 2019-10-10 08:00:00 UTC 2019-10-11 18:00:00 UTC VIB Conferences KU Leuven - Promotion & Jubileumzaal, Naamsestraat 22, 22, Naamsestraat, Leuven, Belgium KU Leuven - Promotion & Jubileumzaal, Naamsestraat 22, 22, Naamsestraat Leuven Vlaams-Brabant Belgium 3000 Bioinformatics Transcriptomics Sequencing [] Evy Vierstraete +32 9 244 66 11 conferences@vib.be [] [] meetings_and_conferences [] Single cell sequencing Sequencingcell diversitySpatial transcriptomicsTranscriptomicstranscriptomicsAlzheimers Clinical Trials And StudiesAlzheimers DiseaseAmnesiaAnimal Models In DementiaAnxiety Autoimmune Disorders & Multiple SclerosisBehavioral IssuesBiopsychiatry Blood-Brain BarrierBrain DiagnosisBrain Disease & FailureBrain InjuryBrain TumourCentral Nervous SystemCerebrovascular DiseaseChild NeurologyClinical NeurophysiologyCNS TumorsCognitive DisordersDementiaDementia CareDemyelinationDiagnosis And TherapyEpilepsyGenetics Genetics And Epigenetics Geriatric NeurologyGut- Brain AxisHeadacheIntervention NeuroradiologyMeningitisMental HealthMental Health NursingMetastatisMovement DisordersMultiple SclerosisMultiple Sclerosis DiagnosisNervous SystemNeural EngineeringNeural EnhancementNeuro-Oncology NeuroanaatomyNeuroanatomyNeurocritical CareNeurodegenerationNeurodegenerative DisorderNeurodegenerative DisordersNeurogeneticsNeuroimagingNeuroimmunologyNeurological DisordersNeurological Disorders And StrokeNeurological InfectionsNeurological SurgeryNeurologistNeurologyNeuromedicinesNeuromuscular MedicineNeuronal AutoantibodiesNeuropathyNeuropeptidesNeuropharmacologyNeuroscienceNeurosurgeryNeurotoxicologyNeurotoxinsNeurotransmissionNeurotransmittersParkinsonParkinsons DiseasePediatric NeurologyPharmacology Psychiatry Psychology PsychoneuroimmunologyRecent Research And Case StudiesRehabilitation TherapyStem Cell Treatment For Neurological DisordersStrokesTraumatic Brain InjuryCNS sequencing disease researchbioinformatics• New developments in technology
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