Course single-cell transcriptomics and epigenomics 2019
3 - 8 February 2019
Roscoff, FranceCourse single-cell transcriptomics and epigenomics 2019 https://www.france-bioinformatique.fr/en/evenements/sincellTE_2019 https://tess.elixir-europe.org/events/course-single-cell-transcriptomics-and-epigenomics-2019 Duration The workshop will take place 3 - 8 February 2019 at Station Biologique de Roscoff, France Objectives This workshop focuses on the large-scale study of heterogeneity across individual cells from a genomic, transcriptomic and epigenomic point of view. New technological developments enable the characterization of molecular information at a single cell resolution for large numbers of cells. The high dimensional omics data that these technologies produce come with novel methodological challenges for the analysis. In this regard, specific bioinformatics and statistical methods have been developed in order to extract robust information. The workshop aims to provide such methods for engineers and researchers directly involved in functional genomics project making use of single-cell. A wide range of single cell topics will be covered in lectures, demonstrations and practical classes. Among others, the areas and issues to be addressed will include the choice of the most appropriate single-cell sequencing technology, the experimental design and the bioinformatics and statistical methods and pipelines. Audience This course is directed towards engineers and researchers who regularly need to undertake single-cell data analysis as well as PhD Student and Post Doc in computational biology or bioinformatics that are interested in the development of methods and pipelines for highly dimensional single-cell data analysis. Working environment Unix command will be used for bioinformatic analysis, and R programming language for statistical analysis. Requirements Understanding of bioinformatics tools and pipelines for next generation sequencing data (RNA-seq or Hi-C or ATAC-seq bulk). Participants must have prior experience on NGS data analysis with R and basic Unix command line skills. Registration Deadline : 15th novembre 2018 (participants selection: end of November 2018). As the number of participants is limited (30 participants), the steering committee will retain candidates on the basis of the information inquired on the registration form. Frais d’inscription pour les personnels académiques Registration fees. A) Academy/University: 600€HT=720€TTC ; B) Private sector: 1.750€HT=2.100€TTC. The registration fee includes accommodation and meals. Scientific coordination: Marc Deloger (Institut Curie, INSERM U900, Mines ParisTech), Marie-Agnès Dillies, C3BI (USR 3756 IP CNRS), Agnès Paquet, UCAGenomiX (IPMC CNRS), Antonio Rausell (Institut Imagine, INSERM UMR-1163), Nicolas Servant (Institut Curie, INSERM U900, Mines ParisTech), Morgane Thomas-Chollier, IBENS (CNRS UMR8197, ENS, INSERM U1024). Technical coordination : Erwan Corre (ABIMS FR2424 CNRS-UPMC, Station Biologique de Roscoff) Administrative management : C3BI (Institut Pasteur) 2019-02-03 09:00:00 UTC 2019-02-08 17:00:00 UTC Marc Deloger, Marie-Agnès Dillies, Agnès Paquet, Antonio Rausell, Nicolas Servant, Morgane Thomas-Chollier Station Biological De Roscoff, Place Georges Teissier, Roscoff, France Station Biological De Roscoff, Place Georges Teissier Roscoff Finistère France 29680 Epigenomics Transcriptomics  inceptionifbfrance genomique  30 workshops_and_courses registration_of_interest 
1 - 4 April 2019
Gent, BelgiumRegulatory Oxylipins https://vibconferences.be/event/regulatory-oxylipins https://tess.elixir-europe.org/events/regulatory-oxylipins-661da9dc-2159-4a34-8809-7851dfbe0b8a Oxylipins, from plants and other organisms, form a constantly growing group of signalling molecules that comprise oxygenated fatty acids and their metabolites. The most renowned regulatory oxylipins are undoubtedly the jasmonates, which, following their discovery in the 1960s, became recognized as regulators of defence, floral organ development and fertility, as growth inhibitors and modulators of senescence, and as elicitors of specialized metabolism in numerous plant species. As such, the jasmonates currently belong to an elite group of heavily investigated phytohormones. Over the last decade, the understanding of biosynthesis, metabolism, and action of regulatory oxylipins has greatly advanced. The ROXY2019 meeting wishes to bring together the international community and leading researchers in the field. Thereby it aims to provide a timely and exciting forum to present and discuss the recent advances and expertise on the study of these molecules that are so crucial for plant growth, development, metabolism, and interaction with the environment. There will be seven plenary sessions that, through combining lectures from invited speakers and short talks on selected abstracts and posters, will highlight the various aspects involved in Regulatory Oxylipin research. These sessions cover the following major themes: Regulatory oxylipins in emerging model systems and non-plant systems, Biochemistry and structural biology, Control of growth and defence, Control of Metabolism, Reproduction, Jasmonate signalling mechanisms and Long-distance signalling, Ecology. We look forward to your contributions to make this an exciting conference. See you in Gent! The organizers Alain Goossens and Ted Farmer Poster information Format: A0 (841 x 1189 mm / 33.1 x 46.8 in), portrait orientation 2019-04-01 09:00:00 UTC 2019-04-04 17:00:00 UTC VIB Conferences - Alain Goossens & Ted Farmer Ghent University - Aula, 9, Voldersstraat, Gent, Belgium Ghent University - Aula, 9, Voldersstraat Gent Oost-Vlaanderen Belgium 9000  email@example.com Faculty of ScienceJournal of Experimental BotanyPCP (Plant & Cell Physiology)The Plant CellThe Plant Journal    Regulatory OxylipinsBiochemistrystructural biologyMetabolismreproductionJasmonate signallingEcology
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