AB3CBS 2016 Conference
1 - 2 November 2016
Brisbane, AustraliaAB3CBS 2016 Conference http://www.abacbs.org/conference/ https://tess.elixir-europe.org/events/ab3cbs-2016-conference AB3CBS-2016 represents a united gathering of bioinformaticians and computational biologists, a fusion of ABACBS with: B3, the Big Bioinformatics and Biology symposium, run at QUT annually COMBINE, the official student sub-committee of ABACBS GOBLET, the Global Organisation of Bioinformatics Learning, Education and Training 2016-11-01 09:00:00 UTC 2016-11-02 00:00:00 UTC Queensland University of Technology QUT P-P514, Brisbane, Australia QUT P-P514 Brisbane Australia Bioinformatics    meetings_and_conferences  ABRBioinformaticsComputationalBiology
HANDS-ON WORKSHOP: BIOCONDUCTOR / SHINY FOR GENOMIC ANALYSIS
3 November 2016
Brisbane, AustraliaHANDS-ON WORKSHOP: BIOCONDUCTOR / SHINY FOR GENOMIC ANALYSIS http://www.abacbs.org/biocasia2016workshop/ https://tess.elixir-europe.org/events/hands-on-workshop-bioconductor-shiny-for-genomic-analysis The Bioconductor project (http://bioconductor.org) is a widely used collection of over 1,200 R packages for high-throughput genomic analysis. This workshop introduces established and new Bioconductor packages and workflows for analyzing high-throughput sequence data. The Shiny (http://shiny.rstudio.com) library and web server make it possible to create an interactive interface to R code and graphics. In the second part of this workshop, participants will write a simple genome browser using Shiny. By the end of the workshop, participants will be able to create their own interactive apps allowing sharing of analyses with collaborators. 2016-11-03 09:00:00 UTC 2016-11-03 00:00:00 UTC Queensland University of Technology Brisbane, Australia Brisbane Australia Data architecture, analysis and design Bioinformatics    workshops_and_courses  ABR
BEST PRACTICES IN BIOINFORMATICS TRAINING
3 - 4 November 2016
Brisbane, AustraliaBEST PRACTICES IN BIOINFORMATICS TRAINING http://www.abacbs.org/gobletworkshops/ https://tess.elixir-europe.org/events/best-practices-in-bioinformatics-training This workshop sponsored by GOBLET and ABACBS will provide an opportunity for the local bioinformatics training and education community to come together with GOBLET colleagues to share the training experiences and discuss topics of common interest. The workshop is aimed at those who have an interest in or are active in training and education, teaching topics relevant to bioinformatics. This includes those teaching in full time degree courses as well as those who teach short specialised courses. 2016-11-03 09:00:00 UTC 2016-11-04 00:00:00 UTC Queensland University of Technology Brisbane, Australia Brisbane Australia Bioinformatics    workshops_and_courses  ABRBioinformatics
Multivariate data analysis methods for biological data using the R package mixOmics
4 November 2016
Brisbane, AustraliaMultivariate data analysis methods for biological data using the R package mixOmics http://www.abacbs.org/conference/#__1 https://tess.elixir-europe.org/events/multivariate-data-analysis-methods-for-biological-data-using-the-r-package-mixomics The workshop will introduce the fundamental concepts of multivariate dimension reduction methodologies for data exploration, identification of biomarkers and integration of large data sets; especially in the context of systems biology, or in research areas where statistical data integration is required. The mixOmics workshop is aimed to data analysts in the fields of bioinformatics, computational biology and applied statistics with a good statistical knowledge and a good working knowledge in R. 2016-11-04 09:00:00 UTC 2016-11-04 00:00:00 UTC Queensland University of Technology Brisbane, Australia Brisbane Australia Data architecture, analysis and design Bioinformatics    workshops_and_courses  ABR
ABACBS/GOBLET RNA-Seq Data Analysis Workshop
10 November 2016
Brisbane, AustraliaABACBS/GOBLET RNA-Seq Data Analysis Workshop http://www.abacbs.org/abacbsgobletrnaseqcourse/ https://tess.elixir-europe.org/events/abacbs-goblet-rna-seq-data-analysis-workshop This hands-on course introduces the participants to RNA-seq data analysis methods, tools and file formats. It covers the whole workflow from quality control and alignment to quantification and differential expression analysis, and also experimental design is discussed. This course is suitable to those who intend to employ RNA-seq in their research and who would like to understand the concepts underlying this method, even if they do not intend to analyse the data themselves. 2016-11-10 09:00:00 UTC 2016-11-10 00:00:00 UTC Queensland University of Technology Brisbane, Australia Brisbane Australia Data architecture, analysis and design Bioinformatics    workshops_and_courses  ABR
Manual curation of Transposable element annotation
4 - 6 February 2019
Versailles, FranceManual curation of Transposable element annotation https://urgi.versailles.inra.fr/Platform/Training/Manual-curation-of-Transposable-element-annotation https://tess.elixir-europe.org/events/manual-curation-of-transposable-element-annotation URGI organizes a BYOD-style (Bring Your Own Data) training course on manual curation of transposable elements reference sequences obtained with REPET pipelines. For pre-registration, please fill the form before December 26, 2018, we will answer you before January 3rd, 2019: https://goo.gl/forms/ordIgogDuQffuQbZ2 Preliminary program Day 1: - Presentation of REPET outputs of TEdenovo and TEannot pipelines needed to curate the consensus library - Presentation of tools used to assist curation/validation of TE consensus - Presentation of use cases Day 2 and 3 -Practice on your data or a set of precomputed data Prerequesite You have already launched TEdenovo and TEannot pipelines using REPET version 2.5 The MySQL database is still alive OR You have already participated to a TE annotation training (@URGI or in the frame of an Elixir Genome assembly and annotation Course)In this case we’ll provide you a precomputed dataset for the training Fees : 150 € (Payment modalities will be sent once registration accepted) 2019-02-04 09:00:00 UTC 2019-02-06 17:00:00 UTC INRA, URGI platform INRA, URGI, Bat 18 Route de SaintCyr RD10, Versailles, France INRA, URGI, Bat 18 Route de SaintCyr RD10 Versailles France 78000 Bioinformatics Genomics INRA email@example.com  Bioinformatician, Bioanalysts 10 workshops_and_courses registration_of_interest Transposable elementsManual curationGenome sequence analysis
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