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10 events found

Keywords: service descriptions  or BPA 

  • EMBL-ABR Training & Learning Workshop

    21 March 2016

    Melbourne, Australia

    EMBL-ABR Training & Learning Workshop https://tess.elixir-europe.org/events/embl-abr-training-learning-workshop This workshop will introduce and discuss the various steps in planning, delivering and assessing success of (Bioinformatics) training. It also provides an overview on key elements in learning. This course aims to make participants aware of the various crucial steps and elements of a hands on session and interactive training as well as where to find useful information. Participants will learn about key ways that adults learn, recognise different styles of learning and training, the roles of the trainer in the classroom and practical tips to ensure interactivity and course opening and closing strategies. This particular course was developed with the specific challenges of delivering bioinformatics training in mind and the settings of end user hands on training sessions instead of traditional lecture based training. 2016-03-21 09:00:00 UTC 2016-03-21 00:00:00 UTC VLSCI - University of Melbourne VLSCI, Melbourne, Australia VLSCI Melbourne Australia Bioinformatics [] [] [] workshops_and_courses [] ABRBPABioinformatics
  • EMBL-ABR Training Day: CyVerse

    11 April 2016

    Melbourne, Australia

    EMBL-ABR Training Day: CyVerse https://tess.elixir-europe.org/events/embl-abr-training-day-cyverse Through several hands-on demos and guided exercises, workshop participants will get a comprehensive look at CyVerse tools and services for large-scale data analysis. Use cases will draw on topics in genomics (including RNA-Seq, assembly, annotation, etc.) and lectures on theory will help you to plan, build, and critique your own experiments. 2016-04-11 09:00:00 UTC 2016-04-11 00:00:00 UTC VLSCI - University of Melbourne VLSCI, Melbourne, Australia VLSCI Melbourne Australia Data architecture, analysis and design Computational biology Data management Data submission, annotation and curation [] [] [] workshops_and_courses [] ABRBPABioinformatics
  • RNA-Seq Data Analysis Using Galaxy

    26 May 2016

    Sydney, Australia

    RNA-Seq Data Analysis Using Galaxy https://tess.elixir-europe.org/events/rna-seq-data-analysis-using-galaxy RNA-Seq Analysis Using Galaxy is a one-day, workshop that introduces the concepts of RNA-Seq analysis. This workshop provides hands-on experience with RNA-Seq data preparation, statistical testing for differential gene expression, identifying novel transcription features and generating graphical summaries of RNA-Seq data. The workshop will focus on the use of Galaxy, a platform that provides a simple and user-friendly interface to bioinformatics tools, and will also feature an introduction to the R environment used widely by bioinformaticians. 2016-05-26 09:00:00 UTC 2016-05-26 00:00:00 UTC Children’s Medical Research Institute Children’s Medical Research Institute, Westmead, Sydney, Australia Children’s Medical Research Institute, Westmead Sydney Australia Data architecture, analysis and design RNA-Seq [] [] [] workshops_and_courses [] BPAABRGalaxy
  • RNA-Seq Analysis Using Galaxy

    26 - 27 May 2016

    Sydney, Australia

    RNA-Seq Analysis Using Galaxy https://tess.elixir-europe.org/events/rna-seq-analysis-using-galaxy RNA-Seq Analysis Using Galaxy is a one-day, workshop that introduces the concepts of RNA-Seq analysis. This workshop provides hands-on experience with RNA-Seq data preparation, statistical testing for differential gene expression, identifying novel transcription features and generating graphical summaries of RNA-Seq data. The workshop will focus on the use of Galaxy, a platform that provides a simple and user-friendly interface to bioinformatics tools, and will also feature an introduction to the R environment used widely by bioinformaticians. 2016-05-26 09:00:00 UTC 2016-05-27 00:00:00 UTC Children’s Medical Research Institute Sydney, Australia Sydney Australia Biomedical science RNA-Seq Bioinformatics [] [] [] workshops_and_courses [] BPAABRBioinformatics
  • Variant Detection Using Galaxy

    27 May 2016

    Sydney, Australia

    Variant Detection Using Galaxy https://tess.elixir-europe.org/events/variant-detection-using-galaxy Variant Detection using Galaxy is a one-day, hands-on workshop that will cover the concepts of detecting small variants, including SNPs and small indels, from next-generation sequencing data. You will use and compare a number of popular detection tools, visualise variants using a genome browser, and annotate SNPs for predicting biological effects. Course Outline -During this course you will learn about; -The tool and workflows of SNP and indel detection -Quality filtering and other techniques for improving SNP prediction accuracy -Comparison of variant detection software -the use of the Galaxy platform for variant detection analysis 2016-05-27 09:00:00 UTC 2016-05-27 00:00:00 UTC Children’s Medical Research Institute Children’s Medical Research Institute, Sydney, Australia Children’s Medical Research Institute Sydney Australia Data architecture, analysis and design [] [] [] workshops_and_courses [] ABRBPAGalaxyvariantcalling
  • 2-day Introduction to NGS Data Analysis

    14 - 15 June 2016

    Melbourne, Australia

    2-day Introduction to NGS Data Analysis https://tess.elixir-europe.org/events/2-day-introduction-to-ngs-data-analysis This Introduction to NGS Data Analysis is a two-day, hands-on workshop that offers attendees a basic understanding of NGS data analysis workflows. The workshop provides hands-on computational experience in analysis of NGS data using common analytical approaches for ChIP-Seq and RNA-Seq data. Workshop Outline -Topics covered by this workshop include: -An introduction to the command line interface and NGS file formats -Assessment of the quality of NGS sequence reads -Sequence alignment algorithms -Basic ChIP-Seq analysis -Basic RNA-Seq analysis 2016-06-14 09:00:00 UTC 2016-06-15 00:00:00 UTC Monash University Monash University, Melbourne, Australia Monash University Melbourne Australia Bioinformatics Data architecture, analysis and design ChIP-seq RNA-Seq [] [] [] workshops_and_courses [] ABRBPAIntroduction
  • Introduction to NGS Data Analysis

    14 - 15 June 2016

    Melbourne, Australia

    Introduction to NGS Data Analysis https://tess.elixir-europe.org/events/introduction-to-ngs-data-analysis This Introduction to NGS Data Analysis is a two-day, hands-on workshop that offers attendees a basic understanding of NGS data analysis workflows. The workshop provides hands-on computational experience in analysis of NGS data using common analytical approaches for ChIP-Seq and RNA-Seq data. 2016-06-14 09:00:00 UTC 2016-06-15 00:00:00 UTC Monash University Melbourne, Australia Melbourne Australia Bioinformatics Data architecture, analysis and design ChIP-seq RNA-Seq [] [] [] workshops_and_courses [] ABRBPABioinformaticsRNA
  • 3-day Fundamentals in NGS Data Analysis

    12 - 14 July 2016

    Perth, Australia

    3-day Fundamentals in NGS Data Analysis https://tess.elixir-europe.org/events/3-day-fundamentals-in-ngs-data-analysis Fundamentals in NGS Data Analysis is a three-day, hands-on workshop that offers attendees a basic understanding of NGS data analysis workflows. The workshop provides hands-on computational experience in analysis of NGS data using common analytical approaches for ChIP-Seq, RNA-Seq data and de novo genome assembly. Workshop Outline Topics covered by this workshop include: -An introduction to the command line interface and NGS file formats -Assessment of the quality of NGS sequence reads -Sequence alignment algorithms -Basic ChIP-Seq analysis -Basic RNA-Seq analysis -de novo genome assembly 2016-07-12 09:00:00 UTC 2016-07-14 00:00:00 UTC Curtin University, Perth, Australia Curtin University Perth Australia Data architecture, analysis and design [] [] [] workshops_and_courses [] ABRBPANGSIntroduction
  • Clinical Genomics Workshop

    18 - 22 July 2016

    Sydney, Australia

    Clinical Genomics Workshop https://tess.elixir-europe.org/events/clinical-genomics-workshop Clinical Genomics Data Analysis: A Practical Course, has been designed for clinical geneticists, genetic counsellors, pathologists, laboratory scientists, bioinformaticians and clinician-researchers who receive genomic reports, and are interested in understanding variant filtering, pathogenicity assignment, quality metrics… 2016-07-18 09:00:00 UTC 2016-07-22 00:00:00 UTC Garvan Institute of Medical Research The Garvan Institute of Medical Research,, Sydney, Australia The Garvan Institute of Medical Research, Sydney Australia Bioinformatics Genomics [] [] [] workshops_and_courses [] ABRBPABioinformatics
  • OpenRiskNet/NanoCommons ontology meeting

    13 - 14 December 2018

    Brussels, Belgium

    OpenRiskNet/NanoCommons ontology meeting https://tess.elixir-europe.org/events/openrisknet-nanocommons-ontology-meeting The goal of this meeting is to get a picture of the ongoing ontology activities in the toxicology area, harmonize these efforts and the developed ontologies therein, and extend the existing toxicology ontology to support OpenRiskNet and NanoCommons tasks. Part of this will be the ontological annotation of OpenRiskNet Application Programming Interfaces (APIs) as used on their cloud. Other goals include extension of the ontology with missing terms (if any), potentially write up guidance documents, and annotation of data sets (possible via OpenRiskNet data APIs). 2018-12-13 13:00:00 UTC 2018-12-14 14:00:00 UTC University of Birmingham office in Brussels, Brussels, Belgium University of Birmingham office in Brussels Brussels Belgium Ontology and terminology Toxicology [] NanoCommonsOpenRiskNetH2020 [] workshops_and_courses [] risk assessmentnanosafetydata annotationservice descriptions
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