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34 events found

Event types: Workshops and courses 

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Keywords: eLearning  or Immunity  or EeLP  or Linux  or RNA-Seq  or PersonalizedMedicine  or Biochemistry 

  • Hunting for Promoters with NGS data

    22 - 25 October 2012

    Oeiras, Portugal

    Hunting for Promoters with NGS data https://tess.elixir-europe.org/events/hunting-for-promoters-with-ngs-data-e3971138-6750-4717-8ca2-dc7792192c85 2012-10-22 09:00:00 UTC 2012-10-25 00:00:00 UTC GTPB Instituto Gulbenkian de Ciência, Oeiras, Portugal Instituto Gulbenkian de Ciência Oeiras Portugal Bioinformatics [] [] [] workshops_and_courses [] Biochemistry
  • Hunting for Promoters with NGS data

    13 - 15 October 2014

    Oeiras, Portugal

    Hunting for Promoters with NGS data https://tess.elixir-europe.org/events/hunting-for-promoters-with-ngs-data 2014-10-13 01:00:00 UTC 2014-10-15 01:00:00 UTC GTPB Instituto Gulbenkian de Ciência, Oeiras, Portugal Instituto Gulbenkian de Ciência Oeiras Portugal Bioinformatics [] [] [] workshops_and_courses [] Biochemistry
  • PM16 Precision medicine

    27 - 30 September 2016

    Oeiras, Portugal

    PM16 Precision medicine https://tess.elixir-europe.org/events/pm16-precision-medicine The implementation of cancer genomics into the clinic is becoming a reality. Personalized medicine or Precision medicine as other authors refers, uses molecular data of a specific patient to guide clinical decisions such as prevention, diagnosis and treatment. This will revolutionize healthcare and will play a dominant role in the future of cancer therapy. Bioinformatics analyses are essential to identify patients who will benefit from treatment based on their molecular profile, and to tailor chemotherapeutic regimens accordingly. The aim of the course is to present a complete computational pipeline for the analysis and interpretation of Next-Generation Sequencing (NGS) data such as exome sequencing or targeted panels that are commonly used in the clinic. We will address the implementation of large-scale genomic sequencing in clinical practice and the recently developed computational strategies for the analysis of NGS data with a particular emphasis on the interpretation of the results, selection of biomarkers of drug response and afford opportunities to match therapies with the characteristics of the individual patient's tumour. Exercises and case studies focused on cancer will be used to illustrate the principles of how genetics influence led to refining diagnoses and personalized treatment of cancer disease. 2016-09-27 09:00:00 UTC 2016-09-30 00:00:00 UTC Instituto Gulbenkian de Ciência Instituto Gulbenkian de Ciência, Oeiras, Portugal Instituto Gulbenkian de Ciência Oeiras Portugal 901 [] [] [] workshops_and_courses [] PersonalizedMedicine
  • Genome assembly and annotation course

    12 - 14 October 2016

    Prague, Czechia

    Elixir node event
    Genome assembly and annotation course https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course ELIXIR Genome assembly and annotation course, Oct 12-14 2016 at the IOCB, Prague, Czech Republic 2016-10-12 09:00:00 UTC 2016-10-14 17:00:00 UTC ELIXIR CZ, IOCB Prague Institute of Organic Chemistry and Biochemistry AS CR, 2, Flemingovo náměstí, Prague, Czechia Institute of Organic Chemistry and Biochemistry AS CR, 2, Flemingovo náměstí Prague Hlavní město Praha Czechia Genomics IOCB Prague [] life scientistsResearchersPhD students workshops_and_courses registration_of_interest genomicsassemblytrainingeLearningEeLP
  • Unix/Linux Tutorial for Beginners

    17 - 19 October 2016

    Elixir node event
    Unix/Linux Tutorial for Beginners https://tess.elixir-europe.org/events/unix-linux-tutorial-for-beginners-b1fe99bb-880f-43eb-8d81-7366ba9a5d0c ELIXIR tutorial "Unix/Linux Tutorial for Beginners", Oct 17-19, 2016 2016-10-17 09:00:00 UTC 2016-10-19 17:00:00 UTC ELIXIR Slovenia, ELIXIR Sweden, NBIS Computer science University of Ljubljana, Faculty of MedicineNBIS [] life scientistsResearchersPhD studentsUndergraduate students workshops_and_courses registration_of_interest Computer sciencelife sciencestrainingeLearningEeLP
  • Train-the-Trainer course

    28 - 30 November 2016

    Ljubljana, Slovenia

    Elixir node event
    Train-the-Trainer course https://tess.elixir-europe.org/events/train-the-trainer-course ELIXIR-EXCELERATE Train-the-Trainer course, Nov 28-30, 2016 at the University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia 2016-11-28 09:00:00 UTC 2016-11-30 17:00:00 UTC ELIXIR Slovenia University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia University of Ljubljana, Faculty of Medicine Ljubljana Slovenia Computer science University of Ljubljana, Faculty of Medicine [] life scientistsResearchersPhD students 20 workshops_and_courses registration_of_interest Computer sciencelife sciencestrainingeLearningEeLP
  • Linux Command line course

    30 November 2016

    Ljubljana, Slovenia

    Elixir node event
    Linux Command line course https://tess.elixir-europe.org/events/linux-command-line-course ELIXIR tutorial "Linux Command line course", Nov 30, 2016 at the University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia 2016-11-30 09:00:00 UTC 2016-11-30 17:00:00 UTC ELIXIR Slovenia University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia University of Ljubljana, Faculty of Medicine Ljubljana Slovenia Computer science University of Ljubljana, Faculty of Medicine [] life scientistsResearchersPhD students 20 workshops_and_courses registration_of_interest Computer sciencelife sciencestrainingeLearningEeLP
  • Linux for Genomics

    20 January 2017

    Edinburgh, United Kingdom

    Linux for Genomics https://tess.elixir-europe.org/events/linux-for-genomics-04835f08-3c91-4dc6-be5c-9ccb661c495e Genomic studies produce vast amounts of data, usually in the form of very large text files. Linux is particularly suited to working with such files, and is therefore arguably one of the most important tools in a bioinformatician’s toolkit. The Linux command-line enables one to view, filter and manipulate large text files that are difficult or impossible to handle with applications like Word or Excel, write pipelines to perform certain tasks, and run bioinformatics software for which no web interface is available. In this workshop we will first cover the most used Linux commands, followed by a short introduction to several popular command-line tools that were especially developed for genomics as well as file formats commonly used in genomics (BED, FASTA, FASTQ, GFF/GTF, SAM/BAM, VCF). 2017-01-20 00:00:00 UTC 2017-01-20 00:00:00 UTC Edinburgh Genomics The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Bioinformatics [] [] [] workshops_and_courses [] BioinformaticsLinux
  • RNA-seq data analysis using Chipster

    31 January 2017

    Elixir node event
    RNA-seq data analysis using Chipster https://tess.elixir-europe.org/events/rna-seq-data-analysis-using-chipster ELIXIR tutorial “RNA-seq data analysis using Chipster”, Jan 31, 2017 2017-01-31 09:00:00 UTC 2017-01-31 17:00:00 UTC IOCB Prague, University of Ljubljana, Faculty of Medicine, ELIXIR-FI Transcriptomics Genomics IOCB PragueUniversity of Ljubljana, Faculty of Medicine [] Researchers workshops_and_courses registration_of_interest transcriptomics RNA-SeqeLearningEeLP
  • How to get the most out of your microarray experiment. A Webinar

    14 February 2017

    Elixir node event
    How to get the most out of your microarray experiment. A Webinar https://tess.elixir-europe.org/events/how-to-get-the-most-out-of-your-microarray-experiment-a-webinar ELIXIR webinar "How to get the most out of your microarray experiment", Feb 14, 2017 2017-02-14 12:30:00 UTC 2017-02-14 15:00:00 UTC NBIS, SciLifeLab Molecular biology NBISSciLifeLab [] Researchers workshops_and_courses registration_of_interest life sciencesmicroarrayseLearningEeLP
  • Unix/Linux Tutorial for Beginners 2

    27 - 29 March 2017

    Elixir node event
    Unix/Linux Tutorial for Beginners 2 https://tess.elixir-europe.org/events/unix-linux-tutorial-for-beginners-2 ELIXIR tutorial "Unix/Linux Tutorial for Beginners 2", Mar 27-29, 2017 2017-03-27 09:00:00 UTC 2017-03-29 17:00:00 UTC ELIXIR Slovenia, ELIXIR Sweden, NBIS Computer science University of Ljubljana, Faculty of MedicineNBIS [] life scientistsResearchersPhD studentsUndergraduate students workshops_and_courses registration_of_interest Computer sciencelife sciencestrainingeLearningEeLP
  • ELIXIR-EXCELERATE HPC Train-the-Researcher course

    6 - 7 April 2017

    Málaga, Spain

    Elixir node event
    ELIXIR-EXCELERATE HPC Train-the-Researcher course https://tess.elixir-europe.org/events/elixir-excelerate-hpc-train-the-researcher-course-3af9b3c7-94a5-46ae-a68c-1c73b87049ab ELIXIR-EXCELERATE HPC Train-the-Researcher course, Apr 6-7, 2017, Malaga, Spain 2017-04-06 09:00:00 UTC 2017-04-07 17:00:00 UTC Escuela Técnica Superior de Ingeniería Informática Escuela Técnica Superior de Ingeniería Informática, 35, Bulevar Louis Pasteur, Málaga, Spain Escuela Técnica Superior de Ingeniería Informática, 35, Bulevar Louis Pasteur Málaga Málaga Spain Computational biology Computer science Escuela Técnica Superior de Ingeniería Informática, University of Malaga [] life scientistsResearchers workshops_and_courses registration_of_interest high-performance computingtrainingeLearningEeLP
  • Introduction to Linux and Workflows for Biologists

    24 - 28 April 2017

    Edinburgh, United Kingdom

    Introduction to Linux and Workflows for Biologists https://tess.elixir-europe.org/events/introduction-to-linux-and-workflows-for-biologists Most high-throughput bioinformatics work these days takes place on the Linux command line. The programs which do the majority of the computational heavy lifting — genome assemblers, read mappers, and annotation tools — are designed to work best when used with a command-line interface. Because the command line can be an intimidating environment, many biologists learn the bare minimum needed to get their analysis tools working. This means that they miss out on the power of Linux to customise their environment and automate many parts of the bioinformatics workflow. This course will introduce the Linux command line environment from scratch and teach students how to make the most of its tools to achieve a high level of productivity when working with biological data. 2017-04-24 00:00:00 UTC 2017-04-28 00:00:00 UTC Edinburgh Genomics The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Bioinformatics [] [] [] workshops_and_courses [] BioinformaticsLinuxWorkflows
  • RNA-Seq Differential Gene Expression Analysis using Galaxy and the GVL

    4 May 2017

    Carlton, Australia

    RNA-Seq Differential Gene Expression Analysis using Galaxy and the GVL https://tess.elixir-europe.org/events/rna-seq-differential-gene-expression-analysis-using-galaxy-and-the-gvl In this tutorial we will cover the concepts of RNA-Seq differential gene expression (DGE) analysis using Galaxy: an open, web-based platform for accessible, reproducible, and transparent computational biomedical research. 2017-05-04 13:30:00 UTC 2017-05-04 16:30:00 UTC Melbourne Bioinformatics Melbourne Bioinformatics, Lab-14, 700, Swanston Street, Carlton, Australia Melbourne Bioinformatics, Lab-14, 700, Swanston Street Carlton Australia Bioinformatics University of Melbourne [] [] workshops_and_courses [] RNA-Seq
  • Genome assembly and annotation course 2

    19 - 23 June 2017

    Ljubljana, Slovenia

    Elixir node event
    Genome assembly and annotation course 2 https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course-2 ELIXIR Genome assembly and annotation course 2, June 19-23 2017 at the University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia 2017-06-19 09:00:00 UTC 2017-06-23 17:00:00 UTC ELIXIR SI, University of Ljubljana, Faculty of Medicine University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia University of Ljubljana, Faculty of Medicine Ljubljana Slovenia Genomics University of Ljubljana, Faculty of Medicine [] life scientistsResearchersPhD students workshops_and_courses registration_of_interest genomicsassemblytrainingeLearningEeLP
  • Training Course on RNA-Seq data analysis

    18 - 20 July 2017

    Milano, Italy

    Training Course on RNA-Seq data analysis https://tess.elixir-europe.org/events/training-course-on-rna-seq-data-analysis The course will provide students with theoretical and practical knowledge on how to perform bioinformatic analyses of RNA-Seq data, mainly aimed at the identification of genes differentially expressed across different conditions. 2017-07-18 14:00:00 UTC 2017-07-20 12:00:00 UTC Allegra Via, Giulio Pavesi, Federico Zambelli, Matteo Chiara Computer Room (aula Calcolo) Department of Biosciences, University of Milan, Via Celoria 26, Milano, Italy Computer Room (aula Calcolo) Department of Biosciences, University of Milan, Via Celoria 26 Milano Città Metropolitana di Milano Italy RNA-Seq University of Milan, Milan, Italy elixir.ita.training@gmail.com, giulio.pavesi@unimi.it ELIXIR Italy PhD Students or young researchers in molecular biology and/or genetics with little or no background in bioinformatics. 30 workshops_and_courses [] RNA-SeqGalaxy
  • Genome assembly and annotation course 3

    23 - 27 October 2017

    Oeiras, Portugal

    Elixir node event
    Genome assembly and annotation course 3 https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course-3 ELIXIR Genome assembly and annotation course 3, Oct 23-27 2017 at the Gulbenkian Institute of Science, Oeiras, Portugal 2017-10-23 09:00:00 UTC 2017-10-27 17:00:00 UTC ELIXIR PT, Instituto Gulbenkian Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande, Oeiras, Portugal Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande Oeiras Portugal Genomics Instituto Gulbenkian de Ciência [] life scientistsResearchersPhD students workshops_and_courses registration_of_interest genomics AssemblyTrainingeLearningEeLP
  • GOBLET/ELIXIR-EXCELERATE Workshop on e-learning

    21 November 2017

    Oeiras, Portugal

    Elixir node event
    GOBLET/ELIXIR-EXCELERATE Workshop on e-learning https://tess.elixir-europe.org/events/goblet-elixir-excelerate-workshop-on-e-learning GOBLET/ELIXIR-EXCELERATE Workshop on e-learning, Nov 21, 2017 at the Gulbenkian Institute of Science, Oeiras, Portugal 2017-11-21 09:00:00 UTC 2017-11-21 17:00:00 UTC Instituto Gulbenkian, ELIXIR Portugal, GOBLET Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande, Oeiras, Portugal Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande Oeiras Portugal Bioinformatics Instituto Gulbenkian de Ciência [] Researchersteachers workshops_and_courses registration_of_interest TeachingeLearningEeLPbioinformatics
  • Think Tank Hackathon

    6 - 7 February 2018

    Ljubljana, Slovenia

    Elixir node event
    Think Tank Hackathon https://tess.elixir-europe.org/events/think-tank-hackathon CHARME Think Tank Hackathon, Feb 6-7, 2018 at the University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia 2018-02-06 09:00:00 UTC 2018-02-07 17:00:00 UTC CHARME, ELIXIR Slovenia, NIB University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia University of Ljubljana, Faculty of Medicine Ljubljana Slovenia Computer science University of Ljubljana, Faculty of Medicine [] life scientistsResearchersPhD students 20 workshops_and_courses registration_of_interest Computer sciencelife sciencestrainingeLearningEeLP
  • Introductory Linux Tutorial for Life Sciences 3

    13 - 15 February 2018

    Elixir node event
    Introductory Linux Tutorial for Life Sciences 3 https://tess.elixir-europe.org/events/introductory-linux-tutorial-for-life-sciences-3 ELIXIR tutorial "Introductory Linux Tutorial for Life Sciences 3", Feb 13-15, 2018 2018-02-13 09:00:00 UTC 2018-02-15 17:00:00 UTC ELIXIR Slovenia, ELIXIR Sweden, NBIS University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia University of Ljubljana, Faculty of Medicine Ljubljana Slovenia Computer science University of Ljubljana, Faculty of MedicineNBIS [] life scientistsResearchersPhD studentsUndergraduate students workshops_and_courses registration_of_interest Computer sciencelife sciencestrainingeLearningEeLP
  • Introduction to Linux and Workflows for Biologists

    14 - 18 May 2018

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to Linux and Workflows for Biologists https://tess.elixir-europe.org/events/introduction-to-linux-and-workflows-for-biologists-866df86c-a827-433d-9445-af7726bcf5a1 Most high-throughput bioinformatics work these days takes place on the Linux command line. The programs which do the majority of the computational heavy lifting — genome assemblers, read mappers, and annotation tools — are designed to work best when used with a command-line interface. Because the command line can be an intimidating environment, many biologists learn the bare minimum needed to get their analysis tools working. This means that they miss out on the power of Linux to customise their environment and automate many parts of the bioinformatics workflow. This course will introduce the Linux command line environment from scratch and teach students how to make the most of its tools to achieve a high level of productivity when working with biological data. 2018-05-14 09:00:00 UTC 2018-05-18 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN Workflows Bioinformatics Edinburgh Genomics Bert Overduin - bert.overduin@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsLinuxWorkflows
  • PRACE HPC Workshop 2018 - Parallel computing in bioinformatics research

    30 May 2018

    Ljubljana, Slovenia

    Elixir node event
    PRACE HPC Workshop 2018 - Parallel computing in bioinformatics research https://tess.elixir-europe.org/events/prace-hpc-workshop-2018-parallel-computing-in-bioinformatics-research HPC PRACE workshop "Parallel computing in bioinformatics research", May 30, 2018 at the HPC PraceDays2018, Ljubljana, Slovenia 2018-05-30 14:00:00 UTC 2018-05-30 16:30:00 UTC PRACE Faculty of Law, University of Ljubljana, Poljanski nasip 2, Ljubljana, Slovenia Faculty of Law, University of Ljubljana, Poljanski nasip 2 Ljubljana Slovenia Comparative genomics University of Ljubljana, Faculty of Law [] life scientistsResearchers 30 workshops_and_courses registration_of_interest comparative genomicshigh-performance computingtrainingeLearningEeLP
  • ResBaz Brisbane 2018

    6 - 8 June 2018

    Brisbane , Australia

    ResBaz Brisbane 2018 https://tess.elixir-europe.org/events/resbaz-brisbane-2018 2018-06-06 08:30:00 UTC 2018-06-08 17:30:00 UTC ResBaz Southbank campus of Griffith University, Brisbane , Australia Southbank campus of Griffith University Brisbane Australia 4101 RNA-Seq Bioinformatics Griffith UniversityUniversity of QueenslandQCIFUniversity of Southern QueenslandQueensland University of Technology resbazbris@gmail.com Amazon Web Services [] workshops_and_courses [] pythonbioinformatics RNA-Seq
  • Beacon - 2018 AHM Workshop

    7 June 2018

    Berlin, Germany

    Elixir node event
    Beacon - 2018 AHM Workshop https://tess.elixir-europe.org/events/beacon-2018-ahm-workshop ELIXIR workshop "Beacon", Jun 7 2018 at the ELIXIR AHM 2018, Berlin, Germany 2018-06-07 09:00:00 UTC 2018-06-07 13:00:00 UTC ELIXIR Germany and Beacon community Hotel Berlin Berlin, 17, Lützowplatz, Berlin, Germany Hotel Berlin Berlin, 17, Lützowplatz Berlin Berlin Germany Genomics Hotel Berlin Berlin [] life scientistsResearchers 30 workshops_and_courses registration_of_interest genomicsdata managementeLearningEeLP
  • Implementation of Data Management Plans & Data Stewardship in practice

    11 September 2018

    Athens, Greece

    Elixir node event
    Implementation of Data Management Plans & Data Stewardship in practice https://tess.elixir-europe.org/events/implementation-of-data-management-plans-data-stewardship-in-practice ELIXIR workshop “Implementation of Data Management Plans & Data Stewardship in practice”, taking place on Sept 11, 2018 as part of the ECCB2018 in Athens, Greece. 2018-09-11 17:30:00 UTC 2018-09-11 19:00:00 UTC Hellenic Society for Computational Biology Stavros Niarchos Foundation Cultural Center, 364, Leoforos Andrea Siggrou, Athens, Greece Stavros Niarchos Foundation Cultural Center, 364, Leoforos Andrea Siggrou Athens Attica Greece Data management Data submission, annotation and curation Stavros Niarchos Foundation Cultural Center [] bioinformaticiansdata stewards 30 workshops_and_courses registration_of_interest data managementdata stewardshipeLearningEeLP
  • RNA-Seq analysis using Galaxy

    18 - 20 September 2018

    Brisbane, Australia

    RNA-Seq analysis using Galaxy https://tess.elixir-europe.org/events/rna-seq-analysis-using-galaxy-99676e29-b720-4387-b14e-a1ae64b772ad 2018-09-18 09:00:00 UTC 2018-09-20 00:00:00 UTC QFAB Room 3.141, Queensland Bioscience Precinct, The University of Queensland, St Lucia, Brisbane, Australia Room 3.141, Queensland Bioscience Precinct, The University of Queensland, St Lucia Brisbane Australia 4067 Bioinformatics University of Queensland training@qfab.org [] [] workshops_and_courses [] Galaxy RNA-Seqbioinformatics
  • Linux for Genomics

    1 October 2018

    Edinburgh, United Kingdom

    Elixir node event
    Linux for Genomics https://tess.elixir-europe.org/events/linux-for-genomics-4e98de3e-0102-46ab-9720-22f1122fd31d Genomic studies produce vast amounts of data, usually in the form of very large text files. Linux is particularly suited to working with such files, and is therefore arguably one of the most important tools in a bioinformatician’s toolkit. The Linux command-line enables one to view, filter and manipulate large text files that are difficult or impossible to handle with applications like Word or Excel, write pipelines to perform certain tasks, and run bioinformatics software for which no web interface is available. In this workshop we will first cover the most used Linux commands, followed by a short introduction to several popular command-line tools that were especially developed for genomics as well as file formats commonly used in genomics (BED, FASTA, FASTQ, GFF/GTF, SAM/BAM, VCF). 2018-10-01 09:00:00 UTC 2018-10-01 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN Genomics Bioinformatics Edinburgh Genomics Donald Dunbar - donald.dunbar@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsGenomicsLinux
  • Galaxy Proteomics workshop Prague 2018

    4 - 5 October 2018

    Prague, Czechia

    Elixir node event
    Galaxy Proteomics workshop Prague 2018 https://tess.elixir-europe.org/events/galaxy-proteomics-workshop-prague-2018 ELIXIR workshop “Galaxy Proteomics workshop Prague 2018”, Oct 4-5 2018 at the IOCB, Prague, Czech Republic 2018-10-04 09:00:00 UTC 2018-10-05 17:00:00 UTC ELIXIR CZ, IOCB Prague Institute of Organic Chemistry and Biochemistry AS CR, 2, Flemingovo náměstí, Prague, Czechia Institute of Organic Chemistry and Biochemistry AS CR, 2, Flemingovo náměstí Prague Hlavní město Praha Czechia Proteomics IOCB Prague [] life scientistsResearchersPhD students workshops_and_courses registration_of_interest GalaxytrainingproteomicseLearningEeLP
  • Hands-on workshop in Marine Metagenomics

    26 - 30 November 2018

    Tromsø, Norway

    Elixir node event
    Hands-on workshop in Marine Metagenomics https://tess.elixir-europe.org/events/hands-on-workshop-in-marine-metagenomics ELIXIR Norway in cooperation with ELIXIR Slovenia is pleased to announce the first Hands-on workshop in Marine Metagenomics. The aim of the workshop is to introduce the participants to the research field of metagenomics with focus on samples from the marine environment. The theoretical part for each subject will be introduced via lectures, followed by a practical Hands-on session. Place: The Arctic University of Norway, each day from 09.00 until 16.00 Target audience: Researcher and students above bachelor level Prerequisite: None, but study or research interest in metagenomics is expected **COURSE FEE: € 250,-** **Deadline for application: November 1, 2018** **[Register here](https://goo.gl/forms/Zw6lk3pAoMdVcykE3)** The maximum number of participants is 20. If the interest for the course is greater than this, we will select participants based on a geographical distribution and on how relevant the workshop will be to the participant. 2018-11-26 09:00:00 UTC 2018-11-30 16:00:00 UTC Arctic University of Norway, ELIXIR Norway, ELIXIR Slovenia Institutt for pedagogikk og lærerutdanning (Faculty of Humanities), Teorifagbygget-Hus 1, Tromsø, Norway Institutt for pedagogikk og lærerutdanning (Faculty of Humanities), Teorifagbygget-Hus 1 Tromsø Troms Norway 9019 Genomics Metagenomics Marine biology Arctic University of Norway [] ResearchersPhD studentsMaster students 20 workshops_and_courses registration_of_interest Marine MetagenomicseLearningEeLP
  • ELIXIR TtR course: Basic genomics using advanced analysis tools

    20 - 21 December 2018

    Ljubljana, Slovenia

    Elixir node event
    ELIXIR TtR course: Basic genomics using advanced analysis tools https://tess.elixir-europe.org/events/elixir-ttr-course-basic-genomics-using-advanced-analysis-tools **NEW DATE FOR THE COURSE HAS BEEN SET: Dec. 20-21** **ELIXIR TtR course: Basic genomics using advanced analysis tools Genomic Data Science with Galaxy** **December 20-21, 2018**, Faculty of Medicine, Vrazov trg 2, Ljubljana (Slovenia) Galaxy is an open source, web-based platform for data intensive biomedical research. The Galaxy Platform provides user friendly software for producing reproducible genomic pipelines for data analysis. This workshop will provide a 2 day introductory session to Galaxy software system. The course will be in English. The course will take place in the computer classroom at the Institute of Biostatistics and Medical Informatics (IBMI), Faculty of Medicine, Vrazov trg 2, Ljubljana. **The limit of participants is 20**. This course will focus on introducing the Galaxy user interface and how it can be used for basic genomic analyses. Sessions will be intensive and hands-on, and taught by experienced instructors from the Galaxy Community. We will cover the basic features of Galaxy, including where to find tools, how to import and use your data, and an introduction to workflows. This session is recommended for anyone who has not used, or only rarely uses Galaxy. **Program topics:** Quick introduction to Galaxy UI (20.12. morning) From peaks to genes (20.12. morning) Reference-based RNA-seq - Quality control (20.12. afternoon) Reference-based RNA-seq - Sequencing (21.12. morning) Lecturers will be **Christophe Antoniewski** and **Olivier Inizan** from ELIXIR France. Course is organised by **ELIXIR Slovenia** in collaboration with **ELIXIR France**. ELIXIR is an European ESFRI priority research infrastructure for bioinformatics that provides databases, (software) tools, services and training (including training materials) for information, cloud storage and supercomputers in the area of life sciences. It coordinates, develops, integrates and sustains life science (bioinformatics) resources across Europe. **Prerequisites:** Wi-Fi enabled laptop with a modern web browser. Latest versions of Google Chrome, Firefox, Safari and Opera will work best. **Location: Faculty of Medicine, University of Ljubljana** If you have any questions about this course, please contact ELIXIR-SI 2018-12-20 09:00:00 UTC 2018-12-21 12:00:00 UTC ELIXIR Slovenia and Faculty of Medicine, University of Ljubljana University of Ljubljana, Faculty of Medicine, Ljubljana, Slovenia University of Ljubljana, Faculty of Medicine Ljubljana Central Slovenia Slovenia SI-1000 Genomics University of Ljubljana, Faculty of Medicine elixir@mf.uni-lj.si [] life scientistsPostgraduate studentsbeginner bioinformaticians 20 workshops_and_courses registration_of_interest galaxygenomicstrainingeLearningEeLP
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