Sequences and genomic features in R
4 September 2017
Melbourne, AustraliaSequences and genomic features in R https://www.eventbrite.com/e/sequences-and-genomic-features-in-r-tickets-37050456914 https://tess.elixir-europe.org/events/sequences-and-genomic-features-in-r This course introduces Bioconductor, a comprehensive collection of R packages related to bioinformatics. We will demonstrate the Bioconductor way of doing things and how to work with biological data types, and equip you to confidently approach whichever specific Bioconductor packages you need. Pre-requisite To attend this class, you must have attended our introductory R course or be reasonably familiar with the R language. 2017-09-04 14:00:00 UTC 2017-09-04 16:00:00 UTC Monash Bioinformatics Platform Melbourne, Melbourne, Australia Melbourne Melbourne Australia Bioinformatics Monash University Dr Sonika Tyagi, email@example.com  PhD studentsPost-docsBioinformaticiansResearchers workshops_and_courses registration_of_interest R-programmingbioinformaticsBioconductor
WEBINAR: Getting started with containers
12 May 2021
AustraliaWEBINAR: Getting started with containers https://www.biocommons.org.au/events/containers-for-beginners https://tess.elixir-europe.org/events/webinar-getting-started-with-containers What are containers? Who uses them? When, and why? You'll hear an expert's overview of using containers on supercomputers and the Cloud, and learn from real life examples of simple, domain-agnostic use. Absolute beginners are welcome to come along and ask the questions you’ve been too embarrassed to ask! This webinar is a collaboration between Pawsey Supercomputing Centre and Australian BioCommons to celebrate Data Science Week. **Presenter:** Dr Sarah Beecroft, HPC Research Fellow, Pawsey Supercomputing Centre **Date/time:** 12 May 2021 - 12:00-13:00 AEST / 11:30 - 12:30 ACST / 10:00-11:00 AWST [**Register here**](https://unimelb.zoom.us/webinar/register/WN_s5vlb2ZqRJGdcN6mGHFsGw) 2021-05-12 12:00:00 UTC 2021-05-12 13:00:00 UTC Australian BioCommons Australia Australia Bioinformatics Computational biology Computer science Australian BiocommonsPawsey Supercomputing Centre Melissa Burke firstname.lastname@example.org  BiologistsBioinformaticians 500 workshops_and_courses first_come_first_served ContainerssupercomputerCloud computing
WEBINAR: Detection of and phasing of hybrid accessions in a target capture dataset
10 June 2021
AustraliaWEBINAR: Detection of and phasing of hybrid accessions in a target capture dataset https://www.biocommons.org.au/events/hybphaser https://tess.elixir-europe.org/events/https-unimelb-zoom-us-webinar-register-wn_czvhidkxst-6xyw4pg3b4g Hybridisation plays an important role in evolution, leading to the exchange of genes between species and in some cases generate new lineages. The use of molecular methods has revealed the frequency and importance of reticulation events is higher than previously thought and this insight continues with the ongoing development of phylogenomic methods that allow novel insights into the role and extent of hybridisation. Hybrids notoriously provide challenges for the reconstruction of evolutionary relationships, as they contain conflicting genetic information from their divergent parental lineages. However, this also provides the opportunity to gain insights into the origin of hybrids (including autopolyploids). This webinar explores some of the challenges and opportunities that occur when hybrids are included in a target capture sequence dataset. In particular, it describes the impact of hybrid accessions on sequence assembly and phylogenetic analysis and further explores how the information of the conflicting phylogenetic signal can be used to detect and resolve hybrid accessions. The webinar will showcase a novel bioinformatic workflow, [HybPhaser](https://www.biorxiv.org/content/10.1101/2020.10.27.354589v2), that can be used to detect and phase hybrids in target capture datasets and will provide the theoretical background and concepts behind the workflow. **Presenter:** Dr Lars Nauheimer, Australian Tropical Herbarium **Date/time:** 10 June 2021 - 12:00-13:00 AEST / 11:30 - 12:30 ACST / 10:00-11:00 AWST [**Register here**](https://unimelb.zoom.us/webinar/register/WN_AZ-ezvarRhqH-eg6TFMG5w) 2021-06-10 12:00:00 UTC 2021-06-10 13:00:00 UTC Australian BioCommons Australia Australia Phylogenetics Australian Biocommons Melissa Burke email@example.com  BioinformaticiansBiologists 500 workshops_and_courses first_come_first_served phylogenetics
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