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43 events found

Event types: Workshops and courses 

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Country: United Kingdom  or Switzerland 

  • First Steps with Python in Life Sciences - streamed

    1 - 3 December 2020

    Streamed from Lausanne and Basel, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences This course is now full with a waiting list. This course will be streamed only for the registered participants. Registered participants will receive specific information directly from the respective course’s organizers. 2020-12-01 09:00:00 UTC 2020-12-03 00:00:00 UTC SIB, Streamed from Lausanne and Basel, Switzerland SIB Streamed from Lausanne and Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Managing your Research Data (Online)

    1 December 2020

    Cambridge, United Kingdom

    Elixir node event
    Managing your Research Data (Online) https://tess.elixir-europe.org/events/managing-your-research-data-online PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. How much data would you lose if your laptop was stolen? Have you ever emailed your colleague a file named 'final_final_versionEDITED'? Have you ever struggled to import your spreadsheets into R? Would you be able to write a Data Management Plan as part of a grant proposal? As a researcher, you will encounter research data in many forms, ranging from measurements, numbers and images to documents and publications. Whether you create, receive or collect data, you will certainly need to organise it at some stage of your project. This workshop will provide an overview of some basic principles on how we can work with data more effectively. We will discuss the best practices for research data management and organisation so that our research is auditable and reproducible by ourselves, and others, in the future. Course materials are available [here](https://datachampcam.github.io/avoid-data-disaster/) This event is part of a series of training courses organized in collaboration with the Bioinformatics Core Facility at [CRUK Cambridge Institute](http://www.cruk.cam.ac.uk/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3593322&course-title=Managing%20your%20Research%20Data).'' 2020-12-01 10:00:00 UTC 2020-12-01 16:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Enrichment Analysis - streamed

    4 December 2020

    Streamed from Lausanne, Switzerland

    Elixir node event
    Enrichment Analysis - streamed https://tess.elixir-europe.org/events/enrichment-analysis-streamed-e34c9070-8d06-485b-9a92-2fdcd0b9385a We are sorry but this course is oversubscribed, with a long waiting list. Sign up here to be informed of the next course. 2020-12-04 09:00:00 UTC 2020-12-04 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Metagenome-atlas: Three commands to start analysing your metagenome data - streamed

    7 December 2020

    Streamed from Geneva, Switzerland

    Elixir node event
    Metagenome-atlas: Three commands to start analysing your metagenome data - streamed https://tess.elixir-europe.org/events/metagenome-atlas-three-commands-to-start-analysing-your-metagenome-data The course is now full with a waiting list. Applications are closed. Thank you for your understanding. 2020-12-07 09:00:00 UTC 2020-12-07 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Winter School - Bioinformatics Data Exploration for Biologists: An introduction to Data Exploration, Statistics and Reproducibility

    7 - 11 December 2020

    Cambridge, United Kingdom

    Elixir node event
    Winter School - Bioinformatics Data Exploration for Biologists: An introduction to Data Exploration, Statistics and Reproducibility https://tess.elixir-europe.org/events/winter-school-bioinformatics-data-exploration-for-biologists-an-introduction-to-data-exploration-statistics-and-reproducibility This 1-week course provides an introduction to data exploration of biological data. It provides a learning journey starting with learning about how we can automate processes that can be reproduced to analyse our biological data. The course will begin with discussing what opportunities and challenges are associated with aspects of bioinformatics analyses. We will address a subset of them in greater detail in the central part of the course and provide time for participants to practise using some of the associated bioinformatics tools. Focusing on solutions around handling biological data, we will cover programming in R, version control, statistical analyses, and data exploration. The R component of the course will cover from the foundations of programming in R to how to use some of the most popular R packages (dplyr and ggplot2) for data manipulation and visualisation. No prior R experience or previous knowledge of programming is required. At the end of the course we will address issues relating to reusability and reproducibility. More information about the course can be found [here](https://e.issuu.com/anonymous-embed.html?u=bioinfocambs&amp;d=bioinformaticsforbiologists_dec2020). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3353700&amp;course-title=Winter%20School%20DEB).'' 2020-12-07 09:30:00 UTC 2020-12-11 17:15:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Data visualisation Bioinformatics University of Cambridge Bioinformatics Training [] This course is aimed at individuals working across biological and biomedical sciences who have little or no experience in bioinformatics.Applicants are expected to have an interest in learning about bioinformatics and/or are in the beginning stages of using bioinformatics in their research with the need to develop their skills and knowledge further.No previous knowledge of programming is required for this course.The course is open to Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals<span style="color:#0000FF"> Non-members of the University of Cambridge to pay £575 </span style><span style="color:#0000FF">All Members of the University of Cambridge to pay £250 </span style> <span style="color:#FF0000">A booking will only be approved and confirmed once the fee has been paid in full.</span style> workshops_and_courses [] HDRUK
  • NGS - Genome variant analysis - streamed

    8 - 9 December 2020

    Streamed from Bern, Switzerland

    Elixir node event
    NGS - Genome variant analysis - streamed https://tess.elixir-europe.org/events/ngs-genome-variant-analysis-3c6175a8-5953-4030-8caf-ebc32ee36273 We are sorry but this course is oversubscribed, with a long waiting list. Sign up here to be informed of the next course. This course will be streamed only for the registered participants. 2020-12-08 09:00:00 UTC 2020-12-09 00:00:00 UTC SIB, Streamed from Bern, Switzerland SIB Streamed from Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Statistics and Machine Learning for Life Sciences - streamed

    10 - 11 December 2020

    Streamed from Basel, Switzerland

    Elixir node event
    Statistics and Machine Learning for Life Sciences - streamed https://tess.elixir-europe.org/events/statistics-and-machine-learning-for-life-sciences We are sorry but this course is oversubscribed, with a long waiting list. Sign up here to be informed of the next course. 2020-12-10 09:00:00 UTC 2020-12-11 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First steps with R in Life Sciences - streamed

    17 - 18 December 2020

    Streamed from Basel, Switzerland

    Elixir node event
    First steps with R in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-46b6d2d6-5357-47e6-90e3-cc9f79953634 We are sorry but this course is oversubscribed, with a long waiting list. Sign up here to be informed of the next course. This course will be streamed only for the registered participants. 2020-12-17 09:00:00 UTC 2020-12-18 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with UNIX in Life Sciences - streamed

    12 January 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    First Steps with UNIX in Life Sciences - streamed https://tess.elixir-europe.org/events/first-steps-with-unix-in-life-sciences-2ff593cf-d240-4e36-900e-7fcfe3dbbd4f This course will be streamed only for the registered participants. Registered participants will receive specific information directly from the respective course’s organizers. 2021-01-12 09:00:00 UTC 2021-01-12 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Version Control with Git - First Steps - streamed

    14 January 2021

    Streamed from Lausanne & Geneva, Switzerland

    Elixir node event
    Version Control with Git - First Steps - streamed https://tess.elixir-europe.org/events/version-control-with-git-first-steps This course will be streamed only for the registered participants, who will receive specific information directly from the respective course’s organizers. 2021-01-14 09:00:00 UTC 2021-01-14 00:00:00 UTC SIB, Streamed from Lausanne & Geneva, Switzerland SIB Streamed from Lausanne & Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • EMBL-EBI: Network Analysis with Cytoscape (Online)

    14 - 15 January 2021

    Cambridge, United Kingdom

    Elixir node event
    EMBL-EBI: Network Analysis with Cytoscape (Online) https://tess.elixir-europe.org/events/embl-ebi-network-analysis-with-cytoscape-online PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. This course provides an introduction to the basic theory and concepts of network analysis. Attendees will learn how to construct protein-protein interaction networks and subsequently use these to overlay large-scale data such as that obtained through RNA-Seq or mass-spec proteomics. The course will focus on giving attendees hands-on experience in the use of [Cytoscape](https://cytoscape.org/what_is_cytoscape.html), an open source software platform for complex network analysis and visualization. The course will also access and analyse the data through Cytoscape apps, including IntAct. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3688978&amp;course-title=EMBL-EBI:%20Network%20Analysis%20with%20Cytoscape).'' 2021-01-14 13:00:00 UTC 2021-01-15 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] This workshop is aimed at researchers interested in proteinsnetwork analysisprotein-protein interactions and related areasBiologists and bioinformaticiansGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Version Control with Git - Advanced Topics - streamed

    15 January 2021

    Streamed from Lausanne & Geneva, Switzerland

    Elixir node event
    Version Control with Git - Advanced Topics - streamed https://tess.elixir-europe.org/events/version-control-with-git-advanced-topics This course will be streamed only for the registered participants, who will receive specific information directly from the respective course’s organizers. 2021-01-15 09:00:00 UTC 2021-01-15 00:00:00 UTC SIB, Streamed from Lausanne & Geneva, Switzerland SIB Streamed from Lausanne & Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed

    18 January 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed https://tess.elixir-europe.org/events/ngs-bioinformatics-quality-control-and-variant-annotation-for-cancer-diagnosis-streamed This course is organised by SIB Swiss Institute of Bioinformatics, in collaboration with the Clinical Pathology Division of the University Hospital of Geneva (HUG). 2021-01-18 09:00:00 UTC 2021-01-18 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Snakemake for scalable and reproducible data analysis - streamed

    18 - 19 January 2021

    Streamed from Dortmund, Switzerland

    Elixir node event
    Snakemake for scalable and reproducible data analysis - streamed https://tess.elixir-europe.org/events/snakemake-for-scalable-and-reproducible-data-analysis-2e28ed29-be2f-4ddd-b53b-cb0ca5f4ac4c Overview Data analyses usually entail the application of many command line tools or scripts to transform, filter, aggregate or plot data and results. 2021-01-18 09:00:00 UTC 2021-01-19 00:00:00 UTC SIB, Streamed from Dortmund, Switzerland SIB Streamed from Dortmund Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Snakemake for scalable and reproducible data analysis - streamed

    18 - 19 January 2021

    Streamed from the University of Duisburg-Essen, Switzerland

    Elixir node event
    Snakemake for scalable and reproducible data analysis - streamed https://tess.elixir-europe.org/events/snakemake-for-scalable-and-reproducible-data-analysis-streamed Overview Data analyses usually entail the application of many command line tools or scripts to transform, filter, aggregate or plot data and results. 2021-01-18 09:00:00 UTC 2021-01-19 00:00:00 UTC SIB, Streamed from the University of Duisburg-Essen, Switzerland SIB Streamed from the University of Duisburg-Essen Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Next Generation Sequencing Platforms and Bioinformatics Analysis (ONLINE LIVE TRAINING)

    20 - 21 January 2021

    Cambridge, United Kingdom

    Elixir node event
    Next Generation Sequencing Platforms and Bioinformatics Analysis (ONLINE LIVE TRAINING) https://tess.elixir-europe.org/events/next-generation-sequencing-platforms-and-bioinformatics-analysis-online-live-training PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. Day 1 will introduce you to next generation sequencing technologies (NGS) and how they work, providers, common bioinformatics workflows, standardised file types, quality control. This session will include an introduction to Galaxy. [Galaxy](https://galaxyproject.org/) is an open, web-based platform for data-intensive life science research that enables non-bioinformaticians to create, run, tune, and share their own bioinformatic analyses. Day 2 will be hands-on practicals on using Galaxy to explore sequencing quality control, before and after removal of low quality samples. This forms the core of all NGS analyses and this day will conclude with how this data pipes into gene expression studies, variant calling and genome assemblies. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3726795&amp;course-title=NGS%20Platforms%20and%20Bioinformatics%20Analysis).'' 2021-01-20 09:00:00 UTC 2021-01-21 12:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Biologistswet-lab scientistsbioinformatics and other life scientists planning to work with next-generation sequencing data.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Experimental Design (Online)

    22 January 2021

    Cambridge, United Kingdom

    Elixir node event
    Experimental Design (Online) https://tess.elixir-europe.org/events/experimental-design-online-f19e6778-258b-4035-ad19-a8699dc9a5d2 PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. Modern technologies are able to deliver an unprecedented amount of data rapidly. However, without due care and attention early in the experimental process, such data are meaningless if they cannot adequately answer the intended research question. This course is aimed at those planning high-throughput experiments and highlights the kinds of questions they should be asking themselves. The course consists of a lecture and small-group discussions led by a member of the Genomics or Bioinformatics Cores. This event is part of a series of training courses organized in collaboration with the Bioinformatics Core Facility at [CRUK Cambridge Institute](http://www.cruk.cam.ac.uk/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3730017&amp;course-title=Experimental%20Design).'' 2021-01-22 09:30:00 UTC 2021-01-22 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Data Management Plan

    25 - 26 January 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    Data Management Plan https://tess.elixir-europe.org/events/data-management-plan-d88da64d-4b5b-49fb-b85f-c2ffb4fed681 Overview Recent studies have shown that worldwide, between 51% and 89% of published life sciences research is not reproducible, with consequent losses estimated at around $100 billions/year in biomedical research (Chalmers et al., 2009; Freedman et 2021-01-25 09:00:00 UTC 2021-01-26 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to GPU programming for life sciences - streamed

    2 February 2021

    Streamed from Basel, Switzerland

    Elixir node event
    Introduction to GPU programming for life sciences - streamed https://tess.elixir-europe.org/events/introduction-to-gpu-programming-for-life-sciences Overview We currently live in an era where most computers possess multiple computing units, and where parallelization is key. 2021-02-02 09:00:00 UTC 2021-02-02 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to statistics with R

    8 - 11 February 2021

    Lausanne, Switzerland

    Elixir node event
    Introduction to statistics with R https://tess.elixir-europe.org/events/introduction-to-statistics-with-r This course will take place in Lausanne with rules complying to COVID situation (distances and hygiene). 2021-02-08 09:00:00 UTC 2021-02-11 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Statistical Analysis (Online)

    12 February 2021

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Statistical Analysis (Online) https://tess.elixir-europe.org/events/introduction-to-statistical-analysis-online-3ed06002-f020-4ea1-af2d-687a12d6af92 PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. This course provides a refresher on the foundations of statistical analysis. The emphasis is on interpreting the results of a statistical test, and being able to determine the correct test to apply. Practicals are conducted using a series of online apps, and we will not teach a particular statistical analysis package, such as R. For courses that teach R, please see the links under "Related courses" . This event is part of a series of training courses organized in collaboration with the Bioinformatics Core Facility at [CRUK Cambridge Institute](http://www.cruk.cam.ac.uk/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3730074&amp;course-title=Introduction%20to%20Statistical%20Analysis).'' 2021-02-12 09:30:00 UTC 2021-02-12 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • A guided tour through Cellosaurus

    15 February 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    A guided tour through Cellosaurus https://tess.elixir-europe.org/events/a-guided-tour-through-cellosaurus Overview Cellosaurus is a cell line knowledge resource. It is a collection of all cell lines used in biomedical research, which includes immortalised, naturally immortal, finite life, vertebrate and invertebrate cell lines, among others. 2021-02-15 09:00:00 UTC 2021-02-15 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First steps with R in Life Sciences

    17 - 18 February 2021

    Basel, Switzerland

    Elixir node event
    First steps with R in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-df5cbd10-aefe-4795-949b-166b527374cf This course will take place in Basel with rules complying to COVID situation (distances and hygiene). 2021-02-17 09:00:00 UTC 2021-02-18 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Transcriptomics Analysis: RNA-seq

    23 - 25 February 2021

    Lausanne, Switzerland

    Elixir node event
    Transcriptomics Analysis: RNA-seq https://tess.elixir-europe.org/events/transcriptomics-analysis-rna-seq-504f54cd-9f87-463a-9604-f1ecdf5a1c6c This course will take place in Lausanne with rules complying to COVID situation (distances and hygiene). 2021-02-23 09:00:00 UTC 2021-02-25 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Single-cell Transcriptomics

    2 - 4 March 2021

    Streamed from Lausanne, Switzerland

    Elixir node event
    Single-cell Transcriptomics https://tess.elixir-europe.org/events/single-cell-transcriptomics-874b3216-acb9-4363-b47f-0d5b0c98629d Overview In contrast to the Bulk RNA sequencing used to quantify the abundance of gene and transcript expression at a whole population level, single-cell RNA sequencing (scRNAseq) allows researchers to study gene expression profile at a single cell 2021-03-02 09:00:00 UTC 2021-03-04 00:00:00 UTC SIB, Streamed from Lausanne, Switzerland SIB Streamed from Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Long-read and RNA

    11 - 12 March 2021

    Bern, Switzerland

    Elixir node event
    Long-read and RNA https://tess.elixir-europe.org/events/long-read-and-rna Overview For the last few years, research in (c)DNA has been dominated by short-read sequencing. Although this has revolutionized the way we answer biological questions, it has its limitations. One important limitation is read length. 2021-03-11 09:00:00 UTC 2021-03-12 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed

    15 March 2021

    Streamed from Geneva, Switzerland

    Elixir node event
    NGS bioinformatics quality control and variant annotation for cancer diagnosis - streamed https://tess.elixir-europe.org/events/ngs-bioinformatics-quality-control-and-variant-annotation-for-cancer-diagnosis-streamed-7590fb55-85fd-4255-bcec-e7ca90e894e3 This course is organised by SIB Swiss Institute of Bioinformatics, in collaboration with the Clinical Pathology Division of the University Hospital of Geneva (HUG). 2021-03-15 09:00:00 UTC 2021-03-15 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Managing your Research Data (Online)

    19 March 2021

    Cambridge, United Kingdom

    Elixir node event
    Managing your Research Data (Online) https://tess.elixir-europe.org/events/managing-your-research-data-online-5bc7a95c-ab27-40ca-b077-6cbed40277f1 PLEASE NOTE The Bioinformatics Team are presently teaching as many courses live online, with tutors available to help you work through the course material on a personal copy of the course environment. We aim to simulate the classroom experience as closely as possible, with opportunities for one-to-one discussion with tutors and a focus on interactivity throughout. How much data would you lose if your laptop was stolen? Have you ever emailed your colleague a file named 'final_final_versionEDITED'? Have you ever struggled to import your spreadsheets into R? Would you be able to write a Data Management Plan as part of a grant proposal? As a researcher, you will encounter research data in many forms, ranging from measurements, numbers and images to documents and publications. Whether you create, receive or collect data, you will certainly need to organise it at some stage of your project. This workshop will provide an overview of some basic principles on how we can work with data more effectively. We will discuss the best practices for research data management and organisation so that our research is auditable and reproducible by ourselves, and others, in the future. Course materials are available [here](https://datachampcam.github.io/avoid-data-disaster/) This event is part of a series of training courses organized in collaboration with the Bioinformatics Core Facility at [CRUK Cambridge Institute](http://www.cruk.cam.ac.uk/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3730088&amp;course-title=Managing%20your%20Research%20Data).'' 2021-03-19 10:00:00 UTC 2021-03-19 16:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • First Steps with Python in Life Sciences

    22 - 24 March 2021

    Basel, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-440ebe81-e125-459a-8249-c99636c80aeb This course will take place in Basel with rules complying to COVID situation (distances and hygiene), but in the event of new restrictions, the participants will be informed that it will not be cancelled, but streamed. 2021-03-22 09:00:00 UTC 2021-03-24 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to R Shiny

    29 March 2021

    Bern, Switzerland

    Elixir node event
    Introduction to R Shiny https://tess.elixir-europe.org/events/introduction-to-r-shiny-7c523dd5-326e-4c63-8885-097e76e33af5 Overview Shiny is an open-source R package that allows building interactive web applications from R, and without knowledge of web-development, enabling data scientists to make their data or analysis interactively explorable and accessible to 2021-03-29 09:00:00 UTC 2021-03-29 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

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