Country: Portugal or Switzerland or Belgium
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"Ready for BioData Management?" Data Stewardship program for the life sciences
21 February - 31 October 2022
Oeiras, Portugal
"Ready for BioData Management?" Data Stewardship program for the life sciences https://biodata.pt/node/387 https://tess.elixir-europe.org/events/ready-for-biodata-management-data-stewardship-program-for-the-life-sciences BioData.pt | ELIXIR Portugal, in collaboration with several other organizations has designed a program to train the first generation of Data Stewards for the life sciences, to support the implementation of data management, open science and FAIR data principles in Portuguese R&I organizations. It will unfold from February to October 2022, allowing trainees get some practice and consolidate the acquired knowledge. It will comprise an introductory module covering the basic concepts of Data Stewardship followed by two assignments and end with a hands-on course for knowledge consolidation. 2022-02-21 09:00:00 UTC 2022-10-31 17:00:00 UTC BioData.pt | ELIXIR Portugal Online and F2F (See details in training documentation), Oeiras, Portugal Online and F2F (See details in training documentation) Oeiras Portugal FAIR data Data submission, annotation, and curation Bioinformatics Data management Biodata.pt - Elixir's portuguese node of the european projec info@biodata.pt ELIXIR Life Science Researchers 24 workshops_and_courses registration_of_interest data managementData management plandata stewardshipdata annotationlife sciencestraining -
Introduction to Glycoinformatics - lectures and practicals - streamed
30 - 31 May 2022
Streamed from Geneva, Switzerland
Introduction to Glycoinformatics - lectures and practicals - streamed https://www.sib.swiss/training/course/20220530_GLYCO https://tess.elixir-europe.org/events/introduction-to-glycoinformatics-lectures-and-practicals-streamed This course will be streamed only for registered participants. Overview The word glycoprotein is often used yet the “glyco” part is hardly ever described. 2022-05-30 09:00:00 UTC 2022-05-31 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to Glycoinformatics - lectures - streamed
30 - 31 May 2022
Streamed from Geneva, Switzerland
Introduction to Glycoinformatics - lectures - streamed https://www.sib.swiss/training/course/20220530_GLYCL https://tess.elixir-europe.org/events/introduction-to-glycoinformatics-lectures-streamed-60ee2d1f-f02a-41e5-b067-0d7381880e71 This course will be streamed only for registered participants. Overview The word glycoprotein is often used yet the “glyco” part is hardly ever described. 2022-05-30 09:00:00 UTC 2022-05-31 00:00:00 UTC SIB, Streamed from Geneva, Switzerland SIB Streamed from Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Intermediate Python
3 June 2022
Bern, Switzerland
Intermediate Python https://www.sib.swiss/training/course/20220603_INTPY https://tess.elixir-europe.org/events/intermediate-python-c512cb9a-2e2c-45b7-a7a0-77bda8569003 Overview Python is an open-source and general-purpose scripting language which runs on all major operating systems. It was designed to be easily read and written with comparatively simple syntax. 2022-06-03 09:00:00 UTC 2022-06-03 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Developing ELIXIR's Future Programme
6 June 2022
Belgium
Developing ELIXIR's Future Programme https://www.elixir-europe.org/events/developing-elixirs-future-programme https://tess.elixir-europe.org/events/developing-elixir-s-future-programme ELIXIR is currently developing it’s Scientific Programme for 2024-2028. Over the last year we have had a number of working groups looking at life-science data challenges and how we think ELIXIR can support data intensive research. But we also want to have a open, pubic debate about opportunities, challenges and priorities for the European life-science data infrastructure. We are therefore organising a high-level workshop in Brussels and invite senior representatives from different research communities to give their perspective on the future. We foresee a format with a series of short presentations (10 minutes) from our high-level panelists that will give inspiration to round-table discussions between the all the workshop participants - each table will then make some recommendations at the end of the debate. 2022-06-06 08:30:00 UTC 2022-06-06 08:30:00 UTC Belgium Belgium [] [] [] [] [] [] -
Introduction to Machine Learning with Python
16 - 17 June 2022
Lausanne or streamed, Switzerland
Introduction to Machine Learning with Python https://www.sib.swiss/training/course/20220616_INMLP https://tess.elixir-europe.org/events/introduction-to-machine-learning-with-python-c778fea7-fbc6-4a51-8aae-276118a6ce62 Overview With the rise of new technologies, the volume of omics data in the fields of biology and medicine has grown exponentially in recent times and a major issue is to mine useful predictive knowledge from these data. 2022-06-16 09:00:00 UTC 2022-06-17 00:00:00 UTC SIB, Lausanne or streamed, Switzerland SIB Lausanne or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to statistics with Python
20 - 21 June 2022
Basel, Switzerland
Introduction to statistics with Python https://www.sib.swiss/training/course/20220620_STATP https://tess.elixir-europe.org/events/introduction-to-statistics-with-python-678b7cea-fec0-446f-8636-22e186bcde23 Overview Statistics are an integral aspect of scientific research, particularly for the life sciences which rely heavily on quantitative methodologies. 2022-06-20 09:00:00 UTC 2022-06-21 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Enrichment Analysis - streamed
24 June 2022
Streamed, Switzerland
Enrichment Analysis - streamed https://www.sib.swiss/training/course/20220624_ENRIC https://tess.elixir-europe.org/events/enrichment-analysis-streamed-0241e7fb-7026-4dc8-bde8-e76da5716df0 Overview Experiments designed to quantify gene expression often yield hundreds of genes that show statistically significant differences between two classes (two biological states, two phenotype states, two experimental conditions, etc). 2022-06-24 09:00:00 UTC 2022-06-24 00:00:00 UTC SIB, Streamed, Switzerland SIB Streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to openBIS
27 June 2022
Lausanne or streamed, Switzerland
Introduction to openBIS https://www.sib.swiss/training/course/20220627_OPNBS https://tess.elixir-europe.org/events/introduction-to-openbis-e75d4225-486a-4c90-a175-0e470d2a6434 Overview This course provides a general overview of openBIS, followed by a practical training session. openBIS is a combined data management platform, Electronic Laboratory Notebook, and Inventory Management System. 2022-06-27 09:00:00 UTC 2022-06-27 00:00:00 UTC SIB, Lausanne or streamed, Switzerland SIB Lausanne or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Summer School on Genetic Epidemiology
29 June - 2 July 2022
Davos, Switzerland
Summer School on Genetic Epidemiology https://www.sib.swiss/training/course/20220629_SSGEP https://tess.elixir-europe.org/events/summer-school-on-genetic-epidemiology Overview This summer school aims at providing guidelines on optimal practice in designing, analyzing, and interpreting genetic epidemiological studies, for those who would like to actively analyze DNA sequencing from whole genome sequencing or whole 2022-06-29 09:00:00 UTC 2022-07-02 00:00:00 UTC SIB, Davos, Switzerland SIB Davos Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Research Data Management and Data Management Plan
30 June - 1 July 2022
Bern or Lausanne, Switzerland
Research Data Management and Data Management Plan https://www.sib.swiss/training/course/20220630_RDMP https://tess.elixir-europe.org/events/research-data-management-and-data-management-plan Overview Recent studies have shown that worldwide, between 51% and 89% of published life sciences research is not reproducible, with consequent losses estimated at around $100 billions/year in biomedical research (Chalmers et al., 2009; Freedman 2022-06-30 09:00:00 UTC 2022-07-01 00:00:00 UTC SIB, Bern or Lausanne, Switzerland SIB Bern or Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Single-cell Transcriptomics
4 - 6 July 2022
Bern, Switzerland
Single-cell Transcriptomics https://www.sib.swiss/training/course/20220704_ISCTR https://tess.elixir-europe.org/events/single-cell-transcriptomics-be70d45c-e4dd-4319-866d-d0c192c60ccf Overview In contrast to the Bulk RNA sequencing used to quantify the abundance of gene and transcript expression at a whole population level, single-cell RNA sequencing (scRNAseq) allows researchers to study gene expression profile at a single cell 2022-07-04 09:00:00 UTC 2022-07-06 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Advanced Statistics: Statistical Modelling
22 - 25 August 2022
Lausanne, Switzerland
Advanced Statistics: Statistical Modelling https://www.sib.swiss/training/course/20220822_ASSM https://tess.elixir-europe.org/events/advanced-statistics-statistical-modelling-dc58174b-c34c-468a-a484-1fa4c7ed7957 Overview While the statistical models and tools presented in an introductory statistics course (such as linear regression) can be used to answer a wide range of questions in life sciences, many types of data can not be analyzed using these simple 2022-08-22 09:00:00 UTC 2022-08-25 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Advanced Programming with R
29 - 31 August 2022
Lausanne, Switzerland
Advanced Programming with R https://www.sib.swiss/training/course/20220831_APRWR https://tess.elixir-europe.org/events/advanced-programming-with-r Overview This 3-day advanced course is targeted at life scientists or bioinformaticians using the R statistical software who want to extend their knowledge. Lectures will be conducted in the morning, with practicals in the afternoon. 2022-08-29 09:00:00 UTC 2022-08-31 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to RNA-Seq: From quality control to pathway analysis
1 - 2 September 2022
Basel, Switzerland
Introduction to RNA-Seq: From quality control to pathway analysis https://www.sib.swiss/training/course/20220901_IRNAS https://tess.elixir-europe.org/events/introduction-to-rna-seq-from-quality-control-to-pathway-analysis-d8c6ae2e-37f6-44fe-826e-a3348db94bd4 Overview This two-day course will present the theory and bioinformatics tools required to analyze RNA-seq gene expression data, The course will present the theory and bioinformatics tools required to analyse RNA-seq gene expression data, from the 2022-09-01 09:00:00 UTC 2022-09-02 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Comparative Genomics
12 - 14 September 2022
Streamed or Lausanne, Switzerland
Comparative Genomics https://www.sib.swiss/training/course/20220912_COMGE https://tess.elixir-europe.org/events/comparative-genomics-d3e772d0-ca37-4239-8d74-2ac20f260036 Overview The aims of this course are to (i) explore key evolutionary concepts, (ii) examine different methodological approaches, and (iii) gain hands-on experience in eukaryotic comparative genomic analyses. 2022-09-12 09:00:00 UTC 2022-09-14 00:00:00 UTC SIB, Streamed or Lausanne, Switzerland SIB Streamed or Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to high-performance computing (sciCORE cluster)
14 September 2022
Streamed from Basel, Switzerland
Introduction to high-performance computing (sciCORE cluster) https://www.sib.swiss/training/course/20220914_IHPC https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-73ca4b1c-7185-4a0a-9ea7-17be4fe5f45b This course is susceptible to be streamed to the registered participants, depending on the evolution of the sanitary situation Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and 2022-09-14 09:00:00 UTC 2022-09-14 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Good practice in high-throughput experiments
21 - 22 September 2022
Zurich or streamed, Switzerland
Good practice in high-throughput experiments https://www.sib.swiss/training/course/20220921_GPHTE https://tess.elixir-europe.org/events/good-practice-in-high-throughput-experiments-b5752b6c-f7ee-4865-8875-ff2ee12485eb Overview This course offers an overview of good practice in high-throughput experiments (e.g. next-generation sequencing or compound screening). Particularly we focus on pitfalls in the design of projects (e.g. 2022-09-21 09:00:00 UTC 2022-09-22 00:00:00 UTC SIB, Zurich or streamed, Switzerland SIB Zurich or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
First Steps with UNIX for Life Scientists
26 September 2022
Zurich, Switzerland
First Steps with UNIX for Life Scientists https://www.sib.swiss/training/course/20220926_FSWU https://tess.elixir-europe.org/events/first-steps-with-unix-for-life-scientists Overview With a constant evolution of technologies, life scientists (such as laboratory biologists) are faced with an increasing need for bioinformatics skills to deal with high-throughput data storage, retrieval and analysis. 2022-09-26 09:00:00 UTC 2022-09-26 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
First Steps with Python in Life Sciences
28 - 30 September 2022
Lausanne, Switzerland
First Steps with Python in Life Sciences https://www.sib.swiss/training/course/20220928_PYTFS https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-05751ded-3ccd-4325-a3bf-7fd378452f09 Overview Have you ever been stuck with a file format that doesn't precisely conform to your needs, found yourself doing annoyingly repetitive data manipulations, or struggled to efficiently manage and explore your data? Python to the rescue! 2022-09-28 09:00:00 UTC 2022-09-30 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Research Data Management and Data Management Plan
27 - 28 October 2022
Bern or Lausanne, Switzerland
Research Data Management and Data Management Plan https://www.sib.swiss/training/course/20221027_RDMP https://tess.elixir-europe.org/events/research-data-management-and-data-management-plan-feebe9bb-fbe8-4a5b-b317-77b82083ff31 Overview Recent studies have shown that worldwide, between 51% and 89% of published life sciences research is not reproducible, with consequent losses estimated at around $100 billions/year in biomedical research (Chalmers et al., 2009; Freedman 2022-10-27 09:00:00 UTC 2022-10-28 00:00:00 UTC SIB, Bern or Lausanne, Switzerland SIB Bern or Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
First Steps in Parallelization with OpenMP
23 November 2022
Basel or streamed, Switzerland
First Steps in Parallelization with OpenMP https://www.sib.swiss/training/course/20221123_OPEMP https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp-e78a74a8-b0da-4972-94c8-b58a9b5062e6 Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. In order to benefit from this computational power, we need to devise programs explicitly written for parallel machines. 2022-11-23 09:00:00 UTC 2022-11-23 00:00:00 UTC SIB, Basel or streamed, Switzerland SIB Basel or streamed Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to high-performance computing (sciCORE cluster)
7 December 2022
Streamed from Basel, Switzerland
Introduction to high-performance computing (sciCORE cluster) https://www.sib.swiss/training/course/20221207_IHPC https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-e05b9960-7646-4eb2-aaca-3e9204da4a82 This course is susceptible to be streamed to the registered participants, depending on the evolution of the sanitary situation Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and 2022-12-07 09:00:00 UTC 2022-12-07 00:00:00 UTC SIB, Streamed from Basel, Switzerland SIB Streamed from Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

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