Content provider: Sheffield Bioinformatics Core
Data Manipulation and Visualisation
1 June 2020
United KingdomData Manipulation and Visualisation http://sbc.shef.ac.uk/training/r-introduction-2020-06-01 https://tess.elixir-europe.org/events/data-manipulation-and-visualisation-588646eb-6b41-45a6-96da-c00750c9f120 R is a highly-regarded, free, software environment for statistical analysis, with many useful features that promote and facilitate reproducible research. In this course, we give an introduction to the R environment and explain how it can be used to import, manipulate and analyse tabular data. After the course you should feel confident to start exploring your own dataset using the materials and references provided. 2020-06-01 08:30:00 UTC 2020-06-01 16:00:00 UTC Bartolome House, Seminar Room EG03, United Kingdom Bartolome House, Seminar Room EG03 United Kingdom S10 2HQ  email@example.com   workshops_and_courses  
Statistical Analysis of Biological Data in R
2 June 2020
United KingdomStatistical Analysis of Biological Data in R http://sbc.shef.ac.uk/training/stats-introduction-2020-06-02 https://tess.elixir-europe.org/events/statistical-analysis-of-biological-data-in-r-8763da73-bed8-4cf7-8b11-dc61e09e7d32 This course provides a refresher on the foundations of statistical analysis. 2020-06-02 08:30:00 UTC 2020-06-02 16:00:00 UTC Bartolome House, Seminar Room EG03, United Kingdom Bartolome House, Seminar Room EG03 United Kingdom S10 2HQ  firstname.lastname@example.org   workshops_and_courses  
RNA-seq Analysis for Beginners
3 July 2020
Sheffield, United KingdomRNA-seq Analysis for Beginners http://sbc.shef.ac.uk/training/rna-seq-introduction-2020-07-03 https://tess.elixir-europe.org/events/rna-seq-analysis-for-beginners-13c9f173-2fdd-4ea6-9005-58aa798bf289 High-throughput RNA-sequencing is now the standard technique for quantifying transcript abundance in a biological sample of interest. In this course we will describe the processes that take place once you submit a library for RNA sequencing, and what data you should expect to receive from the Bioinformatics Core. We will describe the steps involved to go from sequencing library to a list of genes that show statistically significant differences between your biological conditions of interest. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control and assessing differential expression. We will also showcase some web sites you can use for enrichment and pathways analysis. 2020-07-03 08:30:00 UTC 2020-07-03 16:00:00 UTC The Diamond, Workroom 1, Sheffield, United Kingdom The Diamond, Workroom 1 Sheffield United Kingdom S3 7RD  email@example.com   workshops_and_courses  
Introduction to RNA-seq analysis in R
13 - 14 July 2020
Sheffield, United KingdomIntroduction to RNA-seq analysis in R http://sbc.shef.ac.uk/training/rna-seq-in-r-2020-07-13 https://tess.elixir-europe.org/events/introduction-to-rna-seq-analysis-in-r-34ffdcbc-a5b7-49ac-afb9-7d338a38ea26 In this workshop, you will be learning how to analyse RNA-seq count data, using R. This will include reading the data into R, quality control and performing differential expression analysis and gene set testing, with a focus on the edgeR analysis workflow. You will learn how to generate common plots for analysis and visualisation of gene expression data, such as boxplots and heatmaps. You will also be learning how alignment and counting of raw RNA-seq data can be performed in R. This workshop is aimed at biologists interested in learning how to perform differential expression analysis of RNA-seq data when reference genomes are available.. 2020-07-13 08:30:00 UTC 2020-07-14 16:00:00 UTC The Diamond, Workroom 1, Sheffield, United Kingdom The Diamond, Workroom 1 Sheffield United Kingdom S3 7RD  firstname.lastname@example.org   workshops_and_courses  
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