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  • ELIXIR Workshop Genomics

    7 - 8 November 2016

    Bruxelles, Belgium

    Elixir node event
    ELIXIR Workshop Genomics https://tess.elixir-europe.org/events/elixir-workshop-genomics Goal The fast generation of large amounts of data is fundamentally changing the way how research is done today. Many domains of research are challenged with managing, analyzing and sharing genomics data. This is not just a challenge, it is an oppurtunity to implement this workshop for researchers to learn basic handling of genomics concepts, skills and tools. This workshop is aimed at researchers in the life sciences at all career stage and is designed for learners with little to no prior knowledge of Linux and command line tools or biological networks in Cytoscape. A basic knowledge of programming in R is recommended. ​ Workshop Topics The main ambition or this workshop is that researchers get more familiar with genomics data and handle it in a more efficient way. The following topics will be covered during the workshop.   DAY 1 Introduction to Linux and the command line The first session will introduce you to the use of Linux and the command line for managing and analyzing genomics data.   DAY 2​ Data manipulation in R This session gives an introduction to the use of the R packages plyr and ggplot2 for data manipulation and subsequent graphing. Initiation Cytoscape In this tutorial, you will be introduced to the basics of Cytoscape (how to make a network, change the visualisation parameters such as the layout, ...), and to more advanced functionalities such as data integration and data analysis using Cytoscape plugins. 2016-11-07 09:00:00 UTC 2016-11-08 17:00:00 UTC ELIXIR Belgium Belgian Science Policy (BELSPO), 231, Avenue Louise, Bruxelles, Belgium Belgian Science Policy (BELSPO), 231, Avenue Louise Bruxelles Belgium Data visualisation Molecular interactions, pathways and networks Bioinformatics VIB christof.debo@vib.be ELIXIR-BE PhD studentsPost Docs [] [] Cytoscape R-programming Linux
  • CLC Bio Main Workbench, Leuven

    17 February 2017

    Leuven, Belgium

    Elixir node event
    CLC Bio Main Workbench, Leuven https://tess.elixir-europe.org/events/clc-bio-main-workbench-leuven You will learn to: work with the CLC Main Workbench user interface: create folders, import data, adjust settings... open sequences, view and manipulate annotations align sequences and perform BLAST searches virtually PCR-amplify a gene and insert it into a vector assemble sequences generated by Sanger sequencing into contigs and find conflicts between sequence reads​ 2017-02-17 13:00:00 UTC 2017-02-17 16:00:00 UTC VIB Bioinformatics Core O&N4 room 07.339 Gasthuisberg, Leuven, Belgium O&N4 room 07.339 Gasthuisberg Leuven Belgium 3000 [] [] [] [] [] []
  • GATK workshop

    20 - 22 February 2017

    Leuven, Belgium

    Elixir node event
    GATK workshop https://tess.elixir-europe.org/events/gatk-workshop This workshop will focus on the core steps involved in calling variants with the Broad’s Genome Analysis Toolkit, using the “Best Practices” developed by the GATK team. You will learn  why each step is essential to the variant discovery process what are the operations performed on the data at each step how to use the GATK tools to get the most accurate and reliable results out of your dataset. • samtools Familiarity with Please note that this workshop is focused on human data analysis. The majority of the materials presented does apply equally to non-human data, and we will address some questions regarding adaptations that are needed for analysis of non-human data, but we will not go into much detail on those points​. The training will take 3 days, you can register for each day separately 2017-02-20 09:30:00 UTC 2017-02-22 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Vlaams-Brabant Belgium 3010 Sequence analysis [] [] [] [] [] GATKBroad's Genome Analysis Toolkit
  • Hands-on introduction to Perl programming

    6 - 13 March 2017

    Leuven, Belgium

    Elixir node event
    Hands-on introduction to Perl programming https://tess.elixir-europe.org/events/hands-on-introduction-to-perl-programming Learning the basics of Perl programming: different variables, reading files, writing files, regex. Being able to write small scripts to parse text files Using Perl in windows. Day 2 an example about parsing through a list of files introduction into Perl one-liners subroutines and libraries downloading and using libraries ​​​ 2017-03-06 09:30:00 UTC 2017-03-13 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Prep course for Biopython

    31 March 2017

    Leuven, Belgium

    Elixir node event
    Prep course for Biopython https://tess.elixir-europe.org/events/prep-course-for-biopython This training is an introduction to the Biopython training. This training is intended for people who have no experience with Linux and will teach them all knowledge of Linux command line that is required to successfully follow the Biopython training. If you want to follow  the Biopython training​ and you have no experience with Linux command line, you have to follow this introduction.  2017-03-31 09:30:00 UTC 2017-03-31 17:00:00 UTC VIB Bioinformatics Core O&N4 room 06.239 Gasthuisberg, Leuven, Belgium O&N4 room 06.239 Gasthuisberg Leuven Belgium 3000 [] [] [] [] [] []
  • Electronic Lab Notebook Introduction - Ghent

    18 April 2017

    Ghent, Belgium

    Elixir node event
    Electronic Lab Notebook Introduction - Ghent https://tess.elixir-europe.org/events/electronic-lab-notebook-introduction-ghent-638a1f0b-2d27-4f09-b291-72bee6d64baa 2017-04-18 10:00:00 UTC 2017-04-18 12:00:00 UTC VIB Bioinformatics Core PC room V114 1st floor front building VIB-UGent Research Building, Ghent, Belgium PC room V114 1st floor front building VIB-UGent Research Building Ghent Belgium 9052 [] [] [] [] [] []
  • RNA-Seq prep course

    25 April 2017

    Leuven, Belgium

    Elixir node event
    RNA-Seq prep course https://tess.elixir-europe.org/events/rna-seq-prep-course 2017-04-25 09:30:00 UTC 2017-04-25 16:00:00 UTC VIB Bioinformatics Core Gasthuisberg O&N4 room 07.339, Leuven, Belgium Gasthuisberg O&N4 room 07.339 Leuven Belgium 3000 [] [] [] [] [] []
  • Initiation GIMP and Inkscape Ghent

    2 May 2017

    Ghent, Belgium

    Elixir node event
    Initiation GIMP and Inkscape Ghent https://tess.elixir-europe.org/events/initiation-gimp-and-inkscape-ghent 2017-05-02 09:00:00 UTC 2017-05-02 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Initiation GIMP and Inkscape Leuven

    4 May 2017

    Leuven, Belgium

    Elixir node event
    Initiation GIMP and Inkscape Leuven https://tess.elixir-europe.org/events/initiation-gimp-and-inkscape-leuven 2017-05-04 09:00:00 UTC 2017-05-04 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Initiation GIMP and Inkscape - Ghent

    9 May 2017

    Ghent, Belgium

    Elixir node event
    Initiation GIMP and Inkscape - Ghent https://tess.elixir-europe.org/events/initiation-gimp-and-inkscape-ghent-bd18f6fb-c469-418d-8b9e-bd73e73ce890 2017-05-09 09:00:00 UTC 2017-05-09 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Centre, Ghent, Belgium Bio-Accelerator Meeting Centre Ghent Belgium 9052 [] [] [] [] [] []
  • Initiation to Cytoscape

    2 June 2017

    Leuven, Belgium

    Elixir node event
    Initiation to Cytoscape https://tess.elixir-europe.org/events/initiation-to-cytoscape In this course, you will be introduced to the basics of Cytoscape, and to more advanced functionalities such as data integration and data analysis using Cytoscape plugins. The list of topics covered in this hands-on training: Cytoscape is a free, Open Source bioinformatics environment for integration, visualisation, and query of biological networks.? Registration is open for VIB and non-VIB employees and is only available on this website. For any questions about this training, contact bits*Replace*With*At*Sign*vib.be 2017-06-02 09:30:00 UTC 2017-06-02 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven Hotel, Leuven, Belgium Park Inn by Radisson Leuven Hotel Leuven Belgium 3010 [] [] [] [] [] []
  • In silico cloning with SnapGene, Leuven

    8 June 2017

    Leuven, Belgium

    Elixir node event
    In silico cloning with SnapGene, Leuven https://tess.elixir-europe.org/events/in-silico-cloning-with-snapgene-leuven 2017-06-08 13:30:00 UTC 2017-06-08 16:30:00 UTC VIB Bioinformatics Core O&N4 room 06.239 Gasthuisberg, Leuven, Belgium O&N4 room 06.239 Gasthuisberg Leuven Belgium 3000 [] [] [] [] [] []
  • In silico cloning with SnapGene, Ghent

    9 June 2017

    Ghent (Zwijnaarde), Belgium

    Elixir node event
    In silico cloning with SnapGene, Ghent https://tess.elixir-europe.org/events/in-silico-cloning-with-snapgene-ghent 2017-06-09 13:30:00 UTC 2017-06-09 16:30:00 UTC VIB Bioinformatics Core VIB Bioinformatics Core, Ghent (Zwijnaarde), Belgium VIB Bioinformatics Core Ghent (Zwijnaarde) Belgium 9052 [] [] [] [] [] []
  • Protein Structure Analysis

    15 June 2017

    Ghent, Belgium

    Elixir node event
    Protein Structure Analysis https://tess.elixir-europe.org/events/protein-structure-analysis-f095d4f5-e03b-4b1d-9f38-38dff017174a b'\r\n\r\n\n \r\n\r\n\n \r\n\r\n\n' 2017-06-15 09:30:00 UTC 2017-06-15 17:00:00 UTC ELIXIR Belgium VIB-UGent reseach Building FSVM PC room V114 (first floor), Ghent, Belgium VIB-UGent reseach Building FSVM PC room V114 (first floor) Ghent Belgium 9052 [] [] [] [] [] []
  • Biomolecular data mining: a hands-on training

    11 - 13 September 2017

    Antwerpen, Belgium

    Elixir node event
    Biomolecular data mining: a hands-on training https://tess.elixir-europe.org/events/biomolecular-data-mining-a-hands-on-training This course aims to introduce the core principles and biomedical applications of different data mining and machine learning techniques in a hands-on manner. It will tackle both unsupervised (clustering, frequent pattern mining, data projection) and supervised (classification) techniques. The methods that will be seen include hierarchical clustering, k- means clustering, item set mining, association rule mining, principle component analysis, support vector machines, random forests, bayesian networks and artificial neural networks. Attendees will be introduced to the basic operations of these data mining techniques, with a focus on the practical use and interpretation of these procedures rather than the mathematical formulas. In addition, attendants will be introduced to some important data processing and performance evaluation methods related to these data mining techniques. The software used in this course will be R. The course itself will consist of 50% theory lessons, 40% hands-on practicals and 10% application case studies. Organised by biomina: Dr. Pieter Meysman Prof. dr. Kris Laukens 2017-09-11 09:00:00 UTC 2017-09-13 17:00:00 UTC biomina Antwerpen Groenenborgerlaan, Antwerpen, Belgium Antwerpen Groenenborgerlaan Antwerpen Antwerpen Belgium 2020 Biomedical science Machine learning Data mining University of Antwerp Dr. Pieter Meysman Prof. dr. Kris Laukens ELIXIR Belgium and Flemish Region PhD studentsPostDocs 30 workshops_and_courses registration_of_interest []
  • Functional Plant Bioinformatics - PLAZA

    14 - 15 September 2017

    Ghent, Belgium

    Elixir node event
    Functional Plant Bioinformatics - PLAZA https://tess.elixir-europe.org/events/functional-plant-bioinformatics-plaza 2017-09-14 10:00:00 UTC 2017-09-15 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center, Ghent, Belgium Bio-Accelerator Meeting Center Ghent Belgium 9052 [] [] [] [] [] []
  • Introduction to Effective Medical Writing

    25 - 26 September 2017

    Berlin, Germany

    Introduction to Effective Medical Writing https://tess.elixir-europe.org/events/introduction-to-effective-medical-writing Medical writing is both a science and an art. The art of medical writing is to comprehend and present scientific information clearly to suit the specific target audience's level of understanding including patients, the general public, physicians and/or regulatory agencies. Often it is not poor science that kills a scientific paper; rather, it is the lack of clarity and continuity. Poor writing can be very costly to companies and frequently slows the review process of regulatory submissions. In this 2-day course, you will learn about the different types of medical writing and how to write effectively. We will examine various types of writing including abstracts, regulatory documents, and patient education materials. We will also consider ethical issues that face medical writers. You will gain insight into the design of effective documents and what goes into putting together a compelling manuscript. You will also learn how to keep your writing free of medical jargon and common grammatical errors, while ensuring the scientific integrity of your work. 2017-09-25 09:00:00 UTC 2017-09-26 05:00:00 UTC The Center for Professional Innovation & Education Mohrenstraße 30, 30, Mohrenstraße, Berlin, Germany Mohrenstraße 30, 30, Mohrenstraße Berlin Germany The Center for Professional Innovation & Education info@cfpie.com The Center for Professional Innovation & Education PharmaceuticalMedical Device 20 workshops_and_courses first_come_first_served Medical WritingRegulatorySubmissions
  • Medical Writing for Pharma, Biotech and Med Devices

    27 - 29 September 2017

    Berlin, Germany

    Medical Writing for Pharma, Biotech and Med Devices https://tess.elixir-europe.org/events/medical-writing-for-pharma-biotech-and-med-devices This medical writing course’s notes and interactive exercises address how to write effective correspondence and reports in support of the company's activities. You will learn how to organize and deliver information for the intended audience, as well as how to write clear and readable documents, and how to revise and refine your own and others' writing. The course provides an overview of sound grammatical conventions, addresses problematic areas of the English language, and affords opportunities to address specific language issues. 2017-09-27 09:00:00 UTC 2017-09-29 17:00:00 UTC The Center for Professional Innovation & Education The Berlin Hilton, Berlin, Germany The Berlin Hilton Berlin Germany [] info@cfpie.com The Center for Professional Innovation & Education PharmaceuticalMedical DeviceBiotech 20 workshops_and_courses first_come_first_served R&D SupportMedical WritingSubmissionsQA/QC
  • Python for Data Processing

    5 - 6 October 2017

    Heverlee, Belgium

    Elixir node event
    Python for Data Processing https://tess.elixir-europe.org/events/python-for-data-processing 2017-10-05 09:30:00 UTC 2017-10-06 17:00:00 UTC VIB Bioinformatics Core ICTS Education Center KUL Leslokaal A, Heverlee, Belgium ICTS Education Center KUL Leslokaal A Heverlee Belgium 3001 [] [] [] [] [] []
  • Introduction to gene regulation

    9 October 2017

    Gent, Belgium

    Elixir node event
    Introduction to gene regulation https://tess.elixir-europe.org/events/introduction-to-gene-regulation 2017-10-09 09:30:00 UTC 2017-10-09 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Gent, Belgium Bio-Accelerator Gent Belgium 9052 [] [] [] [] [] []
  • Medical Devices: EU Directives, Guidance, CE Marking and ISO Standard Certifications

    12 - 13 October 2017

    Berlin, Germany

    Medical Devices: EU Directives, Guidance, CE Marking and ISO Standard Certifications https://tess.elixir-europe.org/events/medical-devices-eu-directives-guidance-ce-marking-and-iso-standard-certifications Things are changing for Medical Devices and IVDs in the European Union (EU): new fundamental standards, new EU device regulations and BREXIT. What is now needed to enter or, more importantly, to maintain presence in this attractive marketplace for medical devices? Satisfying requirements harmonized across the 28 member states should be a straightforward process to get products approved for distribution in each country - but is it? This course identifies and explains the requirements – old and new – for medical devices, the steps to obtain entry into the marketplace (including setting up on-going procedures and relationships), the increasing importance of Clinical Evaluation and Post Market surveillance, Notified Bodies and Competent Authorities. The course also shares some lessons learned from the Course Director, who has over 25 years of experience with CE marking medical devices for distribution in the EU. 2017-10-12 09:00:00 UTC 2017-10-13 17:00:00 UTC The Center for Professional Innovation & Education The Berlin Hilton, Berlin, Germany The Berlin Hilton Berlin Germany [] info@cfpie.com The Center for Professional Innovation & Education Medical Device 20 workshops_and_courses first_come_first_served EU DirectivesGuidanceCE MarkingISO Standard
  • European Union Regulatory Issues - New Product Development

    16 - 17 October 2017

    Berlin, Germany

    European Union Regulatory Issues - New Product Development https://tess.elixir-europe.org/events/european-union-regulatory-issues-new-product-development This two-day course is designed to provide individuals with a detailed understanding of the important regulatory guidelines involved in the development of a new product plan within the EU. The program will also cover effective strategies for correctly applying the current regulations to ensure that rejections are avoided. The course will provide the attendee with a thorough knowledge of the following topics: •How to develop a regulatory strategy •How to deal with pricing and reimbursement issues in your development •How to validate your regulatory strategy (scientific advice) and how to choose between centralized and national scientific advice •When does your product qualify as an orphan medicinal product and what are the advantages if it does? •How to deal with pediatric development plans •What has to be considered for Advanced Therapy Medicinal Product and oncology medicinal products 2017-10-16 09:00:00 UTC 2017-10-17 17:00:00 UTC The Center for Professional Innovation & Education The Berlin Hilton, Berlin, Germany The Berlin Hilton Berlin Germany [] info@cfpie.com The Center for Professional Innovation & Education PharmaceuticalMedical DeviceBiotech 20 [] first_come_first_served regulatory strategyEuropean Union Regulatory Issues new product plan
  • Integration of Risk Management Principles and Activities into the Quality System

    16 - 17 October 2017

    Berlin, Germany

    Integration of Risk Management Principles and Activities into the Quality System https://tess.elixir-europe.org/events/integration-of-risk-management-principles-and-activities-into-the-quality-system The regulatory and business requirements for the pharma, diagnostics, and medical-device fields continue to update, blend, overlap, and blur. With these changes, the importance of risk assessment—and risk management—gains higher business and regulatory significance. It now becomes even more important for professionals in these fields to recognize, accept, understand, and respond to these changes —particularly since new regulatory requirements have emerged within this changing environment. The market’s Tolerance for Failure of Drugs, Devices, and IVDs has reduced significantly in recent decades. This reduction reflects a general loss of confidence in the medical industry. The adoption of formal Quality Management Systems (QMS) has recovered some of that confidence, but we must still do more. This course addresses what we can do. 2017-10-16 09:00:00 UTC 2017-10-17 17:00:00 UTC The Center for Professional Innovation & Education The Berlin Hilton, Berlin, Germany The Berlin Hilton Berlin Germany [] info@cfpie.com The Center for Professional Innovation & Education quality/production managersengineersauditorsregulatory/quality professionalsclinical/product specialists R&D engineerslaboratory professionalsproduct-development professionals 20 workshops_and_courses first_come_first_served diagnosticsPharmaceuticalMedical DeviceBiotech
  • Filing Variations in the European Union

    18 - 19 October 2017

    Berlin, Germany

    Filing Variations in the European Union https://tess.elixir-europe.org/events/filing-variations-in-the-european-union The course is designed to provide individuals with an in-depth awareness of the rules and procedures for filing variations and extensions. Understanding and applying the rules will ensure that you can file the variations successfully and avoid rejections. The course will also provide the attendee with a thorough knowledge of the following topics: •Overview of the different types of variations and the different procedures for a Marketing Authorizations in the EU •The different types of variations (Type IA, Type IB, Type II) •Variations involving product information •How to deal with unclassified variations •Line extensions •Work-sharing 2017-10-18 09:00:00 UTC 2017-10-19 17:00:00 UTC The Center for Professional Innovation & Education The Berlin Hilton, Berlin, Germany The Berlin Hilton Berlin Germany [] info@cfpie.com The Center for Professional Innovation & Education PharmaceuticalMedical DeviceBiotech 20 workshops_and_courses [] filing variations and extensionsMarketing Authorizations types of variationsunclassified variationsLine extensions
  • Medical Device Validation Training for Professionals

    18 - 20 October 2017

    Berlin, Germany

    Medical Device Validation Training for Professionals https://tess.elixir-europe.org/events/medical-device-validation-training-for-professionals-59a3279d-a054-43b1-af46-f7d93e708dc7 Participants will learn how an effective Process Validation system is a critical requirement to the movement toward a risk-based approach to compliance and product safety. Also to be discussed is how to tackle process validation for medical device combination products. Issues to be covered include: •Learn how poor validation procedures and practices can lead to regulatory actions from regulators •Assurance of product quality derived from a compliant validation program •Learn how to improve process system knowledge and understanding •Learn methods for developing process validations and best practices •Understand the scope of regulations governing process validation and identify gaps •Develop a plan to rectify existing validation plans, protocols and reports •Learn how to implement and deploy a master validation plan Attendees are encouraged to bring examples of Process Validation issues/concerns that they would like to reviewed and discussed during the course. 2017-10-18 09:00:00 UTC 2017-10-20 15:00:00 UTC The Center for Professional Innovation & Education The Berlin Hilton, Berlin, Germany The Berlin Hilton Berlin Germany [] info@cfpie.com The Center for Professional Innovation & Education Regulatory AffairsQuality Assurance & ControlProcess DevelopmentAuditing & Compliance Engineering 20 workshops_and_courses first_come_first_served Process Validationproduct safetyMedical DeviceCFR 820ISO 13485
  • Electronic Lab Notebook Introduction Ghent

    25 October 2017

    Gent, Belgium

    Elixir node event
    Electronic Lab Notebook Introduction Ghent https://tess.elixir-europe.org/events/electronic-lab-notebook-introduction-ghent-fcc80d61-9755-4fe2-8067-00f12ea03c2f 2017-10-25 10:00:00 UTC 2017-10-25 12:00:00 UTC VIB Bioinformatics Core PC Room V114 First floor front building VIB Research Building, Gent, Belgium PC Room V114 First floor front building VIB Research Building Gent Belgium 9052 [] [] [] [] [] []
  • Analysis of public microarray data using Genevestigator

    24 November 2017

    Gent, Belgium

    Elixir node event
    Analysis of public microarray data using Genevestigator https://tess.elixir-europe.org/events/analysis-of-public-microarray-data-using-genevestigator 2017-11-24 09:30:00 UTC 2017-11-24 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Gent, Belgium Bio-Accelerator Gent Belgium 9052 [] [] [] [] [] []
  • Analysis of metabolome data

    15 January 2018

    Ghent, Belgium

    Elixir node event
    Analysis of metabolome data https://tess.elixir-europe.org/events/analysis-of-metabolome-data This training is intended for people who have a basic knowledge of R. Participants who have never worked with R should first follow the course Basic statistics in R.  The morning session will handle differences affecting data handling between GC-MS and LC-MS.  2018-01-15 09:30:00 UTC 2018-01-15 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Gentle hands-on introduction to Python programming

    22 - 29 January 2018

    Gent, Belgium

    Elixir node event
    Gentle hands-on introduction to Python programming https://tess.elixir-europe.org/events/gentle-hands-on-introduction-to-python-programming 2018-01-22 09:30:00 UTC 2018-01-29 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Gent, Belgium Bio-Accelerator Gent Belgium 9052 [] [] [] [] [] []
  • Quick introduction to RStudio

    23 January 2018

    Ghent, Belgium

    Elixir node event
    Quick introduction to RStudio https://tess.elixir-europe.org/events/quick-introduction-to-rstudio 2018-01-23 10:00:00 UTC 2018-01-23 12:00:00 UTC ELIXIR Belgium VIB-UGent Research Building PC room V114, Ghent, Belgium VIB-UGent Research Building PC room V114 Ghent Belgium 9052 [] [] [] [] [] []
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