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  • CAS Personalized Molecular Oncology

    1 October 2018 - 31 July 2019

    Basel, Switzerland

    Elixir node event
    CAS Personalized Molecular Oncology https://tess.elixir-europe.org/events/cas-personalized-molecular-oncology The CAS in Personalized Molecular Oncology aims at providing a comprehensive and integrative view of the field, by covering all the aspects involved along the pipeline: (i) tumor biology and genetics, (ii) molecular pathology, (iii) clinical bioinformatics, and (iv) clinical oncology. First of its kind in Switzerland, it will focus on the methodologies used to generate, analyze and interpret patients’ molecular profiles, also touching upon the associated technical, regulatory and ethical challenges. As an important outcome, it will establish a common language between the wide range of professionals involved in the personalized oncology process, from biologists, bioinformaticians, pathologists to clinicians, enabling an efficient and better informed use of e.g. genomic data for both routine clinical practice and clinical research. Moreover, it should empower professionals to develop a vision for their own institution, by critically evaluating the potential benefits and limitations of current and future developments in personalized oncology. The CAS is organized jointly by the University Hospital of Basel, the University Hospital of Lausanne, and the SIB Swiss Institute of Bioinformatics. 2018-10-01 09:00:00 UTC 2019-07-31 17:00:00 UTC SIB Swiss Institute of Bioinformatics Pathologie Universitätsspital Basel, 40, Schönbeinstrasse, Basel, Switzerland Pathologie Universitätsspital Basel, 40, Schönbeinstrasse Basel Switzerland University Hospital of BaselSIB Swiss Institute of BioinformaticsUniversity Hospital of Lausanne Dr. Aitana Lebrand Clinical Bioinformatics SIB | Swiss Institute of Bioinformatics Ch. des Mines 9 CH-1202 Genève Tel. +41 (0)22 379 02 67 aitana.lebrand@sib.swiss [] Professionals involved in personalized molecular oncology, including laboratory managers, biologists, bioinformaticians, pathologists, geneticists, clinicians and pharmaceutical company employees. workshops_and_courses registration_of_interest Tumor biology and geneticsMolecular pathologyClinical BioinformaticsClinical oncology
  • NGS - Genome variant analysis

    29 - 30 April 2019

    Bern, Switzerland

    Elixir node event
    NGS - Genome variant analysis https://tess.elixir-europe.org/events/ngs-genome-variant-analysis-61e3f31b-dcd2-48bf-b446-9a115382b002 This course is over subscribed. You can still add your name to the waiting list by applying using the button at the bottom of this page. You will only be contacted if a place becomes available. 2019-04-29 09:00:00 UTC 2019-04-30 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to R Shiny

    2 May 2019

    Lausanne, Switzerland

    Elixir node event
    Introduction to R Shiny https://tess.elixir-europe.org/events/shiny This course is over subscribed. You can still add your name to the waiting list by applying using the button at the bottom of this page. You will only be contacted if a place becomes available. 2019-05-02 09:00:00 UTC 2019-05-02 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Using MOFA for integration of omics data

    3 May 2019

    Leuven, Belgium

    Elixir node event
    Using MOFA for integration of omics data https://tess.elixir-europe.org/events/using-mofa-for-integration-of-omics-data 2019-05-03 09:30:00 UTC 2019-05-03 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Introduction to R Shiny

    6 May 2019

    Zurich, Switzerland

    Elixir node event
    Introduction to R Shiny https://tess.elixir-europe.org/events/introduction-to-r-shiny This course is over subscribed. You can still add your name to the waiting list by applying using the button at the bottom of this page. You will only be contacted if a place becomes available. 2019-05-06 09:00:00 UTC 2019-05-06 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to openBIS

    7 May 2019

    Lausanne, Switzerland

    Elixir node event
    Introduction to openBIS https://tess.elixir-europe.org/events/introduction-to-openbis Overview openBIS is a combined data management platform, Electronic Laboratory Notebook, and Inventory Management System. 2019-05-07 09:00:00 UTC 2019-05-07 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps in Parallelization with OpenMP

    8 May 2019

    Basel, Switzerland

    Elixir node event
    First Steps in Parallelization with OpenMP https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp-1bbfd630-8e6e-424b-93c3-692f1df61027 Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. In order to benefit from this computational power we need to devise programs explicitly written for parallel machines. 2019-05-08 09:00:00 UTC 2019-05-08 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • ELIXIR-EXCELERATE Train the trainer

    8 - 10 May 2019

    Basel, Switzerland

    Elixir node event
    ELIXIR-EXCELERATE Train the trainer https://tess.elixir-europe.org/events/elixir-excelerate-train-the-trainer-7b9d0389-490f-46f6-89af-697c998d655e This course is over subscribed. You can still add your name to the waiting list by applying using the button at the bottom of this page. You will only be contacted if a place becomes available. 2019-05-08 09:00:00 UTC 2019-05-10 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Docker for reproducible computational research

    13 May 2019

    Bern, Switzerland

    Elixir node event
    Docker for reproducible computational research https://tess.elixir-europe.org/events/docker-for-reproducible-computational-research-4fbe7a5a-06bb-4c5f-8ae1-4fed251567d8 Overview Bioinformatics analysis usually involves a large number of software tools, reference data and pipelines used to elaborate the results. 2019-05-13 09:00:00 UTC 2019-05-13 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • RNA-seq data analysis

    13 - 15 May 2019

    Elixir node event
    RNA-seq data analysis https://tess.elixir-europe.org/events/rna-seq-data-analysis-bb102c9c-3745-416b-b0d4-290da7968660 2019-05-13 09:00:00 UTC 2019-05-15 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Tools for reproducible research

    14 - 15 May 2019

    Elixir node event
    Tools for reproducible research https://tess.elixir-europe.org/events/tools-for-reproducible-research-8ec06134-42d9-4f18-8a5d-3fb3ab414e3a 2019-05-14 09:00:00 UTC 2019-05-15 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Live Long-Read sequencing and data analysis

    15 - 17 May 2019

    Fribourg, Switzerland

    Elixir node event
    Live Long-Read sequencing and data analysis https://tess.elixir-europe.org/events/live-long-read-sequencing-and-analysis More information here 2019-05-15 09:00:00 UTC 2019-05-17 00:00:00 UTC SIB, Fribourg, Switzerland SIB Fribourg Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Genome Annotation

    15 - 17 May 2019

    Elixir node event
    Introduction to Genome Annotation https://tess.elixir-europe.org/events/introduction-to-genome-annotation-2ce3da98-b5dc-490b-82e2-deb14d40b2f3 2019-05-15 09:00:00 UTC 2019-05-17 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Quick and clean: advanced Python for data science in biology

    20 - 24 May 2019

    Elixir node event
    Quick and clean: advanced Python for data science in biology https://tess.elixir-europe.org/events/quick-and-clean-advanced-python-for-data-science-in-biology-39dd812c-9151-4485-946a-3326f9818d37 2019-05-20 09:00:00 UTC 2019-05-24 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Introduction to Bioinformatics using NGS data, Gothenburg

    20 - 24 May 2019

    Elixir node event
    Introduction to Bioinformatics using NGS data, Gothenburg https://tess.elixir-europe.org/events/introduction-to-bioinformatics-using-ngs-data-gothenburg 2019-05-20 09:00:00 UTC 2019-05-24 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Biostatistics Essentials: a blackboard approach

    21 - 23 May 2019

    Elixir node event
    Biostatistics Essentials: a blackboard approach https://tess.elixir-europe.org/events/biostatistics-essentials-a-blackboard-approach 2019-05-21 09:00:00 UTC 2019-05-23 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • First Steps with UNIX in Life Sciences

    28 May 2019

    Lausanne, Switzerland

    Elixir node event
    First Steps with UNIX in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-unix-in-life-sciences-36cb482a-4e6a-4f85-a4f9-2f53b42cdea7 Overview With a constant evolution of technologies, life scientists (such as laboratory biologists) are faced with an increasing need for bioinformatics skills to deal with high-throughput data storage, retrieval and analysis. 2019-05-28 09:00:00 UTC 2019-05-28 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Statistical methods for big data in life sciences and health with R

    3 - 6 June 2019

    Lausanne, Switzerland

    Elixir node event
    Statistical methods for big data in life sciences and health with R https://tess.elixir-europe.org/events/statistical-methods-for-big-data-in-life-sciences-and-health-with-r Overview In this course, biologists, computational biologists and bioinformatics scientists will acquire the key competencies that they need when dealing with big data from the health and life sciences fields. 2019-06-03 09:00:00 UTC 2019-06-06 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Cryo-EM sample preparation and data collection

    3 - 5 June 2019

    Elixir node event
    Cryo-EM sample preparation and data collection https://tess.elixir-europe.org/events/cryo-em-sample-preparation-and-data-collection-33ca34ed-e93e-4b7b-aac5-c167cf17dcd8 2019-06-03 09:00:00 UTC 2019-06-05 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • RaukR, Advanced R for Bioinformatics, Summer course

    10 - 20 June 2019

    Elixir node event
    RaukR, Advanced R for Bioinformatics, Summer course https://tess.elixir-europe.org/events/raukr-advanced-r-for-bioinformatics-summer-course 2019-06-10 09:00:00 UTC 2019-06-20 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • NGS - Quality control, Alignment, Visualisation

    12 - 14 June 2019

    Bern, Switzerland

    Elixir node event
    NGS - Quality control, Alignment, Visualisation https://tess.elixir-europe.org/events/ngs-quality-control-alignment-visualisation-ae907af5-87b3-4a91-a5d2-754012a06b7e Overview Usage of NGS is increasing in several biological fields due to a very rapid decrease in cost. However, it often results in hundreds of Gbs of data making the downstream analysis very challenging and requires bioinformatics skills. 2019-06-12 09:00:00 UTC 2019-06-14 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to high-performance computing (sciCORE cluster)

    19 June 2019

    Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-cac27254-dfeb-42a0-a82c-1ae2209b38c4 Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2019-06-19 09:00:00 UTC 2019-06-19 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • SIB PhD Training Network Annual Retreat

    24 - 26 June 2019

    Fribourg, Switzerland

    Elixir node event
    SIB PhD Training Network Annual Retreat https://tess.elixir-europe.org/events/sib-phd-training-network-annual-retreat-09268123-5621-4f87-b0bd-7ed24ab7783e This course is exclusively reserved to the members of the SIB PhD Training Network. 2019-06-24 09:00:00 UTC 2019-06-26 00:00:00 UTC SIB, Fribourg, Switzerland SIB Fribourg Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • ELIXIR-SIB Data Carpentry with R - Genomics curriculum

    1 - 2 July 2019

    Zurich, Switzerland

    Elixir node event
    ELIXIR-SIB Data Carpentry with R - Genomics curriculum https://tess.elixir-europe.org/events/elixir-sib-data-carpentry-with-r ELIXIR-EXCELERATE is funded by the European Commission within the Research Infrastructures programme of Horizon 2020, grant agreement number 676559 Overview This workshop is hosted by the SIB Swiss Institute of Bioinformatics and the 2019-07-01 09:00:00 UTC 2019-07-02 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Advanced Statistics: Statistical Modeling

    19 - 22 August 2019

    Lausanne, Switzerland

    Elixir node event
    Advanced Statistics: Statistical Modeling https://tess.elixir-europe.org/events/advanced-statistics-statistical-modeling-5ff40dcd-dad2-46c2-a6d6-4a7c8b8d65a6 Overview While the statistical models and tools presented in an introductory statistics course (such as linear regression) can be used to answer a wide range of questions in life sciences, many types of data can not be analyzed using these tools. 2019-08-19 09:00:00 UTC 2019-08-22 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Epigenomics data analysis

    26 - 30 August 2019

    Elixir node event
    Epigenomics data analysis https://tess.elixir-europe.org/events/epigenomics-data-analysis 2019-08-26 09:00:00 UTC 2019-08-30 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Clinical bioinformatics for microbial genomics and metagenomics - ESCMID, CHUV, SIB

    9 - 12 September 2019

    Lausanne, Switzerland

    Elixir node event
    Clinical bioinformatics for microbial genomics and metagenomics - ESCMID, CHUV, SIB https://tess.elixir-europe.org/events/clinical-bioinformatics-for-microbial-genomics-and-metagenomics-escmid-chuv-sib Overview Next generation sequencing (NGS) is being increasingly used and implemented at clinical microbiology laboratories, heavily relying on bioinformatics for data processing, analysis and interpretation. 2019-09-09 09:00:00 UTC 2019-09-12 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Bioinformatics using NGS data, Uppsala

    9 - 13 September 2019

    Elixir node event
    Introduction to Bioinformatics using NGS data, Uppsala https://tess.elixir-europe.org/events/introduction-to-bioinformatics-using-ngs-data-uppsala-b997ea28-3232-4b81-86ea-d071bc3516f6 2019-09-09 09:00:00 UTC 2019-09-13 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Omics Integration and Systems Biology

    9 - 12 September 2019

    Elixir node event
    Omics Integration and Systems Biology https://tess.elixir-europe.org/events/omics-integration-and-systems-biology 2019-09-09 09:00:00 UTC 2019-09-12 00:00:00 UTC [] [] [] workshops_and_courses [] []
  • Bioinformatics for Principal Investigators

    17 - 18 September 2019

    Elixir node event
    Bioinformatics for Principal Investigators https://tess.elixir-europe.org/events/bioinformatics-for-principal-investigators-5c2ea228-9867-42ee-85cb-9413c3381019 2019-09-17 09:00:00 UTC 2019-09-18 00:00:00 UTC [] [] [] workshops_and_courses [] []
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