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274 events found

Content provider: VIB Bioinformatics Core  or Galaxy Project 

  • 2011 Galaxy Community Conference (GCC2011)

    25 - 27 May 2011

    2011 Galaxy Community Conference (GCC2011) https://tess.elixir-europe.org/events/2011-galaxy-community-conference-gcc2011 2011-05-25 09:00:00 UTC 2011-05-27 00:00:00 UTC [] Organizers [] [] [] [] []
  • GCC2015

    6 - 9 July 2015

    GCC2015 https://tess.elixir-europe.org/events/gcc2015 2015-07-06 09:00:00 UTC 2015-07-09 00:00:00 UTC [] Organisers [] [] [] [] []
  • GCC2016

    25 - 30 June 2016

    GCC2016 https://tess.elixir-europe.org/events/gcc2016 2016-06-25 09:00:00 UTC 2016-06-30 00:00:00 UTC [] Organizers [] [] [] [] []
  • ELIXIR Workshop Genomics

    7 - 8 November 2016

    Bruxelles, Belgium

    Elixir node event
    ELIXIR Workshop Genomics https://tess.elixir-europe.org/events/elixir-workshop-genomics Goal The fast generation of large amounts of data is fundamentally changing the way how research is done today. Many domains of research are challenged with managing, analyzing and sharing genomics data. This is not just a challenge, it is an oppurtunity to implement this workshop for researchers to learn basic handling of genomics concepts, skills and tools. This workshop is aimed at researchers in the life sciences at all career stage and is designed for learners with little to no prior knowledge of Linux and command line tools or biological networks in Cytoscape. A basic knowledge of programming in R is recommended. ​ Workshop Topics The main ambition or this workshop is that researchers get more familiar with genomics data and handle it in a more efficient way. The following topics will be covered during the workshop.   DAY 1 Introduction to Linux and the command line The first session will introduce you to the use of Linux and the command line for managing and analyzing genomics data.   DAY 2​ Data manipulation in R This session gives an introduction to the use of the R packages plyr and ggplot2 for data manipulation and subsequent graphing. Initiation Cytoscape In this tutorial, you will be introduced to the basics of Cytoscape (how to make a network, change the visualisation parameters such as the layout, ...), and to more advanced functionalities such as data integration and data analysis using Cytoscape plugins. 2016-11-07 09:00:00 UTC 2016-11-08 17:00:00 UTC ELIXIR Belgium Belgian Science Policy (BELSPO), 231, Avenue Louise, Bruxelles, Belgium Belgian Science Policy (BELSPO), 231, Avenue Louise Bruxelles Belgium Data visualisation Molecular interactions, pathways and networks Bioinformatics VIB christof.debo@vib.be ELIXIR-BE PhD studentsPost Docs [] [] Cytoscape R-programming Linux
  • QIIME Contribution Fest

    9 - 11 January 2017

    QIIME Contribution Fest https://tess.elixir-europe.org/events/qiime-contribution-fest-0b8b49bb-0ab1-4d25-8895-b261d5af53cf 2017-01-09 09:00:00 UTC 2017-01-11 00:00:00 UTC [] Bérénice, Björn, and Saskia [] [] [] [] []
  • European Galaxy Developer Workshop

    16 - 20 January 2017

    European Galaxy Developer Workshop https://tess.elixir-europe.org/events/european-galaxy-developer-workshop-55fa3b02-1e48-4141-99a4-8b9dc3421424 2017-01-16 09:00:00 UTC 2017-01-20 00:00:00 UTC [] Organisers [] [] [] [] []
  • RNA Sequencing and Differential Expression

    23 - 24 January 2017

    RNA Sequencing and Differential Expression https://tess.elixir-europe.org/events/rna-sequencing-and-differential-expression-04afb409-5d3c-48e5-b5db-26fde7fde5c2 2017-01-23 09:00:00 UTC 2017-01-24 00:00:00 UTC [] Sophie Shaw [] [] [] [] []
  • Advanced RNA Sequencing (RNA-seq) Analysis

    24 - 25 January 2017

    Advanced RNA Sequencing (RNA-seq) Analysis https://tess.elixir-europe.org/events/advanced-rna-sequencing-rna-seq-analysis 2017-01-24 09:00:00 UTC 2017-01-25 00:00:00 UTC [] Sophie Shaw [] [] [] [] []
  • Researcher Training Day for Life Scientists

    3 February 2017

    Researcher Training Day for Life Scientists https://tess.elixir-europe.org/events/researcher-training-day-for-life-scientists 2017-02-03 09:00:00 UTC 2017-02-03 17:00:00 UTC [] Simon Gladman, Pip Griffin, Jessica Chung, Clare Sloggett [] [] [] [] []
  • GAMe 2017 Conference

    4 - 6 February 2017

    GAMe 2017 Conference https://tess.elixir-europe.org/events/game-2017-conference 2017-02-04 09:00:00 UTC 2017-02-06 00:00:00 UTC [] See web site. [] [] [] [] []
  • Globus Genomics and several other cloud-based solution in data storage and management

    6 - 7 February 2017

    Globus Genomics and several other cloud-based solution in data storage and management https://tess.elixir-europe.org/events/globus-genomics-and-several-other-cloud-based-solution-in-data-storage-and-management 2017-02-06 09:00:00 UTC 2017-02-07 00:00:00 UTC [] Ravi Madduri [] [] [] [] []
  • Galaxy for Translational Research

    6 - 8 February 2017

    Galaxy for Translational Research https://tess.elixir-europe.org/events/galaxy-for-translational-research 2017-02-06 09:00:00 UTC 2017-02-08 00:00:00 UTC [] Andrew Stubbs [] [] [] [] []
  • Galaxy Admin Training

    6 - 10 February 2017

    Galaxy Admin Training https://tess.elixir-europe.org/events/galaxy-admin-training 2017-02-06 09:00:00 UTC 2017-02-10 00:00:00 UTC [] Enis Afgan, Nate Coraor, Bjoern Gruening, Simon Gladman, Ross Lazarus, [] [] [] [] []
  • RNA-Seq In Galaxy Workshop

    8 - 9 February 2017

    RNA-Seq In Galaxy Workshop https://tess.elixir-europe.org/events/rna-seq-in-galaxy-workshop 2017-02-08 09:00:00 UTC 2017-02-09 00:00:00 UTC [] organizers [] [] [] [] []
  • From Galaxy to Genomics using NGS Data

    8 - 11 February 2017

    From Galaxy to Genomics using NGS Data https://tess.elixir-europe.org/events/from-galaxy-to-genomics-using-ngs-data 2017-02-08 09:00:00 UTC 2017-02-11 00:00:00 UTC [] Mo Heydarian, Mallory Freeberg [] [] [] [] []
  • 3rd Galaxy High-Throughput-Sequencing (HTS) data analysis workshop

    13 - 18 February 2017

    3rd Galaxy High-Throughput-Sequencing (HTS) data analysis workshop https://tess.elixir-europe.org/events/3rd-galaxy-high-throughput-sequencing-hts-data-analysis-workshop-6ce2f819-ea19-4f0a-9292-472b416b957e 2017-02-13 09:00:00 UTC 2017-02-18 00:00:00 UTC [] Freiburg Galaxy Team [] [] [] [] []
  • Using Galaxy workflows for metabolomics

    13 - 18 February 2017

    Using Galaxy workflows for metabolomics https://tess.elixir-europe.org/events/using-galaxy-workflows-for-metabolomics 2017-02-13 09:00:00 UTC 2017-02-18 00:00:00 UTC [] Etienne Thevenot [] [] [] [] []
  • Introduction to Galaxy Workshop

    14 - 15 February 2017

    Introduction to Galaxy Workshop https://tess.elixir-europe.org/events/introduction-to-galaxy-workshop-67920725-f96c-488e-9a52-4e1e721f3436 2017-02-14 09:00:00 UTC 2017-02-15 00:00:00 UTC [] David Meltzer [] [] [] [] []
  • CLC Bio Main Workbench, Leuven

    17 February 2017

    Leuven, Belgium

    Elixir node event
    CLC Bio Main Workbench, Leuven https://tess.elixir-europe.org/events/clc-bio-main-workbench-leuven You will learn to: work with the CLC Main Workbench user interface: create folders, import data, adjust settings... open sequences, view and manipulate annotations align sequences and perform BLAST searches virtually PCR-amplify a gene and insert it into a vector assemble sequences generated by Sanger sequencing into contigs and find conflicts between sequence reads​ 2017-02-17 13:00:00 UTC 2017-02-17 16:00:00 UTC VIB Bioinformatics Core O&N4 room 07.339 Gasthuisberg, Leuven, Belgium O&N4 room 07.339 Gasthuisberg Leuven Belgium 3000 [] [] [] [] [] []
  • Bioinformatics Workshops on Galaxy and Metagenomics

    20 - 21 February 2017

    Bioinformatics Workshops on Galaxy and Metagenomics https://tess.elixir-europe.org/events/bioinformatics-workshops-on-galaxy-and-metagenomics 2017-02-20 09:00:00 UTC 2017-02-21 00:00:00 UTC [] Mallory Freeberg, Mo Heydarian [] [] [] [] []
  • GATK workshop

    20 - 22 February 2017

    Leuven, Belgium

    Elixir node event
    GATK workshop https://tess.elixir-europe.org/events/gatk-workshop This workshop will focus on the core steps involved in calling variants with the Broad’s Genome Analysis Toolkit, using the “Best Practices” developed by the GATK team. You will learn  why each step is essential to the variant discovery process what are the operations performed on the data at each step how to use the GATK tools to get the most accurate and reliable results out of your dataset. • samtools Familiarity with Please note that this workshop is focused on human data analysis. The majority of the materials presented does apply equally to non-human data, and we will address some questions regarding adaptations that are needed for analysis of non-human data, but we will not go into much detail on those points​. The training will take 3 days, you can register for each day separately 2017-02-20 09:30:00 UTC 2017-02-22 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Vlaams-Brabant Belgium 3010 Sequence analysis [] [] [] [] [] GATKBroad's Genome Analysis Toolkit
  • Supporting genomic analysis of diverse organisms using the Galaxy framework

    22 - 23 February 2017

    Supporting genomic analysis of diverse organisms using the Galaxy framework https://tess.elixir-europe.org/events/supporting-genomic-analysis-of-diverse-organisms-using-the-galaxy-framework 2017-02-22 09:00:00 UTC 2017-02-23 00:00:00 UTC [] James Taylor [] [] [] [] []
  • The Pulse of Cloud Computing with Bioinformatics as an example

    27 - 28 February 2017

    The Pulse of Cloud Computing with Bioinformatics as an example https://tess.elixir-europe.org/events/the-pulse-of-cloud-computing-with-bioinformatics-as-an-example 2017-02-27 09:00:00 UTC 2017-02-28 00:00:00 UTC [] Nuwan Goonasekera, Enis Afgan [] [] [] [] []
  • Genome assembly using Galaxy

    28 February - 1 March 2017

    Genome assembly using Galaxy https://tess.elixir-europe.org/events/genome-assembly-using-galaxy-6bf78e95-0b20-401f-82d5-a444049d148b 2017-02-28 09:00:00 UTC 2017-03-01 00:00:00 UTC [] organizers [] [] [] [] []
  • RNA-seq analysis using Galaxy

    1 March 2017

    RNA-seq analysis using Galaxy https://tess.elixir-europe.org/events/rna-seq-analysis-using-galaxy-b9f2d1b3-6538-46b9-8c1f-3f433575cf1d 2017-03-01 09:00:00 UTC 2017-03-01 17:00:00 UTC [] organizers [] [] [] [] []
  • Galaxy-qld User Group

    1 March 2017

    Galaxy-qld User Group https://tess.elixir-europe.org/events/galaxy-qld-user-group 2017-03-01 09:00:00 UTC 2017-03-01 17:00:00 UTC [] Igor Makunin [] [] [] [] []
  • Variant detection using Galaxy

    2 March 2017

    Variant detection using Galaxy https://tess.elixir-europe.org/events/variant-detection-using-galaxy-472e7783-f24d-4ccd-8c61-8cc91a7fd544 2017-03-02 09:00:00 UTC 2017-03-02 17:00:00 UTC [] organizers [] [] [] [] []
  • Galaxy Discovery: do-it-yourself bioinformatics

    3 - 4 March 2017

    Galaxy Discovery: do-it-yourself bioinformatics https://tess.elixir-europe.org/events/galaxy-discovery-do-it-yourself-bioinformatics 2017-03-03 09:00:00 UTC 2017-03-04 00:00:00 UTC [] Björn Grüning, Devon Ryan, David Sanin [] [] [] [] []
  • Hands-on introduction to Perl programming

    6 - 13 March 2017

    Leuven, Belgium

    Elixir node event
    Hands-on introduction to Perl programming https://tess.elixir-europe.org/events/hands-on-introduction-to-perl-programming Learning the basics of Perl programming: different variables, reading files, writing files, regex. Being able to write small scripts to parse text files Using Perl in windows. Day 2 an example about parsing through a list of files introduction into Perl one-liners subroutines and libraries downloading and using libraries ​​​ 2017-03-06 09:30:00 UTC 2017-03-13 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Introduction to Galaxy - Data Manipulation and Visualisation

    7 - 8 March 2017

    Introduction to Galaxy - Data Manipulation and Visualisation https://tess.elixir-europe.org/events/introduction-to-galaxy-data-manipulation-and-visualisation-1cfaaf66-0a20-4d1f-9268-9dfb7405ab10 2017-03-07 09:00:00 UTC 2017-03-08 00:00:00 UTC [] Anne Pajon, Jing Su [] [] [] [] []
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