Register event
76 events found

Content provider: VIB Bioinformatics Core  or ABACBS 

  • ELIXIR Workshop Genomics

    7 - 8 November 2016

    Bruxelles, Belgium

    Elixir node event
    ELIXIR Workshop Genomics https://tess.elixir-europe.org/events/elixir-workshop-genomics Goal The fast generation of large amounts of data is fundamentally changing the way how research is done today. Many domains of research are challenged with managing, analyzing and sharing genomics data. This is not just a challenge, it is an oppurtunity to implement this workshop for researchers to learn basic handling of genomics concepts, skills and tools. This workshop is aimed at researchers in the life sciences at all career stage and is designed for learners with little to no prior knowledge of Linux and command line tools or biological networks in Cytoscape. A basic knowledge of programming in R is recommended. ​ Workshop Topics The main ambition or this workshop is that researchers get more familiar with genomics data and handle it in a more efficient way. The following topics will be covered during the workshop.   DAY 1 Introduction to Linux and the command line The first session will introduce you to the use of Linux and the command line for managing and analyzing genomics data.   DAY 2​ Data manipulation in R This session gives an introduction to the use of the R packages plyr and ggplot2 for data manipulation and subsequent graphing. Initiation Cytoscape In this tutorial, you will be introduced to the basics of Cytoscape (how to make a network, change the visualisation parameters such as the layout, ...), and to more advanced functionalities such as data integration and data analysis using Cytoscape plugins. 2016-11-07 09:00:00 UTC 2016-11-08 17:00:00 UTC ELIXIR Belgium Belgian Science Policy (BELSPO), 231, Avenue Louise, Bruxelles, Belgium Belgian Science Policy (BELSPO), 231, Avenue Louise Bruxelles Belgium Data visualisation Molecular interactions, pathways and networks Bioinformatics VIB christof.debo@vib.be ELIXIR-BE PhD studentsPost Docs [] [] Cytoscape R-programming Linux
  • CLC Bio Main Workbench, Leuven

    17 February 2017

    Leuven, Belgium

    Elixir node event
    CLC Bio Main Workbench, Leuven https://tess.elixir-europe.org/events/clc-bio-main-workbench-leuven You will learn to: work with the CLC Main Workbench user interface: create folders, import data, adjust settings... open sequences, view and manipulate annotations align sequences and perform BLAST searches virtually PCR-amplify a gene and insert it into a vector assemble sequences generated by Sanger sequencing into contigs and find conflicts between sequence reads​ 2017-02-17 13:00:00 UTC 2017-02-17 16:00:00 UTC VIB Bioinformatics Core O&N4 room 07.339 Gasthuisberg, Leuven, Belgium O&N4 room 07.339 Gasthuisberg Leuven Belgium 3000 [] [] [] [] [] []
  • GATK workshop

    20 - 22 February 2017

    Leuven, Belgium

    Elixir node event
    GATK workshop https://tess.elixir-europe.org/events/gatk-workshop This workshop will focus on the core steps involved in calling variants with the Broad’s Genome Analysis Toolkit, using the “Best Practices” developed by the GATK team. You will learn  why each step is essential to the variant discovery process what are the operations performed on the data at each step how to use the GATK tools to get the most accurate and reliable results out of your dataset. • samtools Familiarity with Please note that this workshop is focused on human data analysis. The majority of the materials presented does apply equally to non-human data, and we will address some questions regarding adaptations that are needed for analysis of non-human data, but we will not go into much detail on those points​. The training will take 3 days, you can register for each day separately 2017-02-20 09:30:00 UTC 2017-02-22 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Vlaams-Brabant Belgium 3010 Sequence analysis [] [] [] [] [] GATKBroad's Genome Analysis Toolkit
  • Hands-on introduction to Perl programming

    6 - 13 March 2017

    Leuven, Belgium

    Elixir node event
    Hands-on introduction to Perl programming https://tess.elixir-europe.org/events/hands-on-introduction-to-perl-programming Learning the basics of Perl programming: different variables, reading files, writing files, regex. Being able to write small scripts to parse text files Using Perl in windows. Day 2 an example about parsing through a list of files introduction into Perl one-liners subroutines and libraries downloading and using libraries ​​​ 2017-03-06 09:30:00 UTC 2017-03-13 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Prep course for Biopython

    31 March 2017

    Leuven, Belgium

    Elixir node event
    Prep course for Biopython https://tess.elixir-europe.org/events/prep-course-for-biopython This training is an introduction to the Biopython training. This training is intended for people who have no experience with Linux and will teach them all knowledge of Linux command line that is required to successfully follow the Biopython training. If you want to follow  the Biopython training​ and you have no experience with Linux command line, you have to follow this introduction.  2017-03-31 09:30:00 UTC 2017-03-31 17:00:00 UTC VIB Bioinformatics Core O&N4 room 06.239 Gasthuisberg, Leuven, Belgium O&N4 room 06.239 Gasthuisberg Leuven Belgium 3000 [] [] [] [] [] []
  • Electronic Lab Notebook Introduction - Ghent

    18 April 2017

    Ghent, Belgium

    Elixir node event
    Electronic Lab Notebook Introduction - Ghent https://tess.elixir-europe.org/events/electronic-lab-notebook-introduction-ghent-638a1f0b-2d27-4f09-b291-72bee6d64baa 2017-04-18 10:00:00 UTC 2017-04-18 12:00:00 UTC VIB Bioinformatics Core PC room V114 1st floor front building VIB-UGent Research Building, Ghent, Belgium PC room V114 1st floor front building VIB-UGent Research Building Ghent Belgium 9052 [] [] [] [] [] []
  • RNA-Seq Data Analysis Workshop Using R

    18 - 21 April 2017

    RNA-Seq Data Analysis Workshop Using R https://tess.elixir-europe.org/events/rna-seq-data-analysis-workshop-using-r The RNA-Seq Data Analysis With R workshop will introduce attendees to the R software environment and the specific skills and applications used in R-based RNA-Seq data analysis. Register: http://www.bioplatforms.com/rna-data-analysis-with-r-2017/ 2017-04-18 23:00:00 UTC 2017-04-21 01:30:00 UTC RNA-Seq [] [] [] workshops_and_courses [] []
  • R Software Carpentry Workshop

    19 - 21 April 2017

    R Software Carpentry Workshop https://tess.elixir-europe.org/events/r-software-carpentry-workshop Introductory programming workshop covering the Unix shell, reproducible programming in R and version control with Git and Github. Registration: http://www.abacbs.org/combineworkshops/r-swc-melb-april-2017 2017-04-19 22:00:00 UTC 2017-04-21 06:00:00 UTC [] [] [] workshops_and_courses [] []
  • Intro to Python

    19 - 20 April 2017

    Intro to Python https://tess.elixir-europe.org/events/intro-to-python-01409037-ab76-4b9d-bf0d-be280f28dd86 Held at the Clayton campus at Monash University. For more information and to register: https://www.eventbrite.com/e/introduction-to-python-tickets-32835513906 2017-04-19 23:00:00 UTC 2017-04-20 06:00:00 UTC [] [] [] workshops_and_courses [] []
  • RNA-Seq prep course

    25 April 2017

    Leuven, Belgium

    Elixir node event
    RNA-Seq prep course https://tess.elixir-europe.org/events/rna-seq-prep-course 2017-04-25 09:30:00 UTC 2017-04-25 16:00:00 UTC VIB Bioinformatics Core Gasthuisberg O&N4 room 07.339, Leuven, Belgium Gasthuisberg O&N4 room 07.339 Leuven Belgium 3000 [] [] [] [] [] []
  • GeneMappers 2017

    26 - 28 April 2017

    GeneMappers 2017 https://tess.elixir-europe.org/events/genemappers-2017 http://www.genemappers.org/ Welcome to GeneMappers 2017 A warm welcome to the 12th GeneMappers Conference, to be held at the Novotel Hotel on the Waterfront in vibrant Geelong, Victoria, from Wednesday April 26th to Friday 28th 2017. In the past, The GeneMappers Conference has focused on approaches for the genetic dissection of common human diseases. The next GeneMappers will expand this theme to include genomic analyses of host-pathogen relationships, and other organisms as it relates to human disease and clinically relevant traits. We will look towards the future: with mechanism of gene action and translation of genetic research themes of particular interest. Geelong is ideally placed at the entrance to the Bellarine Peninsula, with its wineries, fine dining and historic towns such as Queenscliff, and is also at the gateway to the Surf Coast and Great Ocean Road. The conference venue is surrounded by cafes, restaurants and accommodation options in the midst of Geelong’s beautiful, revived waterfront. Our conference dinner on Friday evening will be a highlight and held on “The Pier”, within walking distance to the hotel and suspended over Port Philip Bay. Geelong is only a 1 hr drive from Melbourne’s Tullamarine Airport and Melbourne City, and only 20 kms from Avalon Airport. Both airports are connected to Geelong by road and regular public transport (bus) services. This GeneMappers will be an excellent venue for families: we will be hosting a family break out room, there is an in-house swimming pool for Novotel guests, and there are plenty of walking and playground options nearby, including a child-safe beach. The conference is also outside Easter school holidays for most Australian States, and yet finishes at the start of a weekend, providing the family an opportunity to explore this exciting region. We hope that this conference will inspire you and your work and we look forward to welcoming you to GeneMappers 2017, Geelong. 2017-04-26 02:00:00 UTC 2017-04-28 06:30:00 UTC [] [] [] workshops_and_courses [] []
  • Initiation GIMP and Inkscape Ghent

    2 May 2017

    Ghent, Belgium

    Elixir node event
    Initiation GIMP and Inkscape Ghent https://tess.elixir-europe.org/events/initiation-gimp-and-inkscape-ghent 2017-05-02 09:00:00 UTC 2017-05-02 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Initiation GIMP and Inkscape Leuven

    4 May 2017

    Leuven, Belgium

    Elixir node event
    Initiation GIMP and Inkscape Leuven https://tess.elixir-europe.org/events/initiation-gimp-and-inkscape-leuven 2017-05-04 09:00:00 UTC 2017-05-04 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Introduction to R

    8 - 9 May 2017

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-f0d42cab-8f83-4e47-96df-22378b625f75 This hands-on workshop will introduce the fundamentals of the R software environment, a powerful, popular and free statistical and graphical programming language. Participants will learn about the structure of the R language, how to add functionality through packages, and how to process data and generate tables, figures and reports using R. Researchers looking for analysis capabilities beyond those provided by Excel. No prior knowledge of R is required, but a familiarity with the command-line will be useful. The workshop is relevant for all disciplines, although some examples and exercises will focus on biological datasets. Further details and registration: http://qfab.org/workshops/introduction-r-09-may-2017 2017-05-08 23:00:00 UTC 2017-05-09 07:00:00 UTC [] [] [] workshops_and_courses [] []
  • Initiation GIMP and Inkscape - Ghent

    9 May 2017

    Ghent, Belgium

    Elixir node event
    Initiation GIMP and Inkscape - Ghent https://tess.elixir-europe.org/events/initiation-gimp-and-inkscape-ghent-bd18f6fb-c469-418d-8b9e-bd73e73ce890 2017-05-09 09:00:00 UTC 2017-05-09 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Centre, Ghent, Belgium Bio-Accelerator Meeting Centre Ghent Belgium 9052 [] [] [] [] [] []
  • COMBINE R for Bioinformatics workshop

    18 - 19 May 2017

    Carlton, Australia

    COMBINE R for Bioinformatics workshop https://tess.elixir-europe.org/events/combine-r-for-bioinformatics-workshop Bioconductor is an Open-Source repository for bioinformatics software in R Statistical Programming Language. Bioconductor provides core technologies and infrastructures that facilitates day-to-day bioinformatics data analysis, including data retrieval, data processing and data analysis. This is a one-day intensive workshop on Bioconductor core packages such as GenomicFeatures, GenomicRanges, GenomicAlignments, Biostrings, Rsamtools, GEOquery, AnnotationHub and other annotation packages. An intermediate knowledge of R is required. Instructors: Anna Quaglieri, Paul Harrison, Maria Doyle, Agnieszka Aleksandra Golicz and Soroor Hediyeh-Zadeh Details: What: COMBINE R for Bioinformatics workshop Date: 19th May 2017 Time: 9am – 5pm Location: Lab14, 700 Swanston St, Carlton VIC 3053 Registration: http://www.abacbs.org/combineworkshops/bioconductor-melb-may-2017 Price: Student $15, Non-student $30 This event is sponsored by Melbourne Bioinformatics. 2017-05-18 23:00:00 UTC 2017-05-19 07:00:00 UTC Soroor Hediyeh-Zadeh combine@combine.org.au LAB-14, 700, Swanston Street, Carlton, Australia LAB-14, 700, Swanston Street Carlton Melbourne City Australia Genomics Bioinformatics [] Melbourne Bioinformatics [] workshops_and_courses first_come_first_served R-programming
  • Initiation to Cytoscape

    2 June 2017

    Leuven, Belgium

    Elixir node event
    Initiation to Cytoscape https://tess.elixir-europe.org/events/initiation-to-cytoscape In this course, you will be introduced to the basics of Cytoscape, and to more advanced functionalities such as data integration and data analysis using Cytoscape plugins. The list of topics covered in this hands-on training: Cytoscape is a free, Open Source bioinformatics environment for integration, visualisation, and query of biological networks.? Registration is open for VIB and non-VIB employees and is only available on this website. For any questions about this training, contact bits*Replace*With*At*Sign*vib.be 2017-06-02 09:30:00 UTC 2017-06-02 17:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven Hotel, Leuven, Belgium Park Inn by Radisson Leuven Hotel Leuven Belgium 3010 [] [] [] [] [] []
  • In silico cloning with SnapGene, Leuven

    8 June 2017

    Leuven, Belgium

    Elixir node event
    In silico cloning with SnapGene, Leuven https://tess.elixir-europe.org/events/in-silico-cloning-with-snapgene-leuven 2017-06-08 13:30:00 UTC 2017-06-08 16:30:00 UTC VIB Bioinformatics Core O&N4 room 06.239 Gasthuisberg, Leuven, Belgium O&N4 room 06.239 Gasthuisberg Leuven Belgium 3000 [] [] [] [] [] []
  • In silico cloning with SnapGene, Ghent

    9 June 2017

    Ghent (Zwijnaarde), Belgium

    Elixir node event
    In silico cloning with SnapGene, Ghent https://tess.elixir-europe.org/events/in-silico-cloning-with-snapgene-ghent 2017-06-09 13:30:00 UTC 2017-06-09 16:30:00 UTC VIB Bioinformatics Core VIB Bioinformatics Core, Ghent (Zwijnaarde), Belgium VIB Bioinformatics Core Ghent (Zwijnaarde) Belgium 9052 [] [] [] [] [] []
  • Protein Structure Analysis

    15 June 2017

    Ghent, Belgium

    Elixir node event
    Protein Structure Analysis https://tess.elixir-europe.org/events/protein-structure-analysis-f095d4f5-e03b-4b1d-9f38-38dff017174a b'\r\n\r\n\n \r\n\r\n\n \r\n\r\n\n' 2017-06-15 09:30:00 UTC 2017-06-15 17:00:00 UTC ELIXIR Belgium VIB-UGent reseach Building FSVM PC room V114 (first floor), Ghent, Belgium VIB-UGent reseach Building FSVM PC room V114 (first floor) Ghent Belgium 9052 [] [] [] [] [] []
  • COMBINE Unix/R Workshop Brisbane

    27 - 29 June 2017

    COMBINE Unix/R Workshop Brisbane https://tess.elixir-europe.org/events/combine-unix-r-workshop-brisbane Unix/R workshop at the University of Queensland, Brisbane https://www.abacbs.org/combineworkshops/unix-r-brisbane-june-2017 2017-06-27 22:00:00 UTC 2017-06-29 06:00:00 UTC [] [] [] workshops_and_courses [] []
  • RNAseq workshop in R, Brisbane

    5 - 7 July 2017

    RNAseq workshop in R, Brisbane https://tess.elixir-europe.org/events/rnaseq-workshop-in-r-brisbane RNAseq workshop in R, University of Queensland, Brisbane https://www.abacbs.org/combineworkshops/rnaseq-bris-july-2017 2017-07-05 23:00:00 UTC 2017-07-07 07:00:00 UTC [] [] [] workshops_and_courses [] []
  • Introduction to R

    12 - 13 July 2017

    Clayton, Australia

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-ab6dceb1-f7e0-4583-9b7e-4344a50535f3 This workshop will teach the fundamentals of R. You will learn to quickly visualize and summarize data from experiments involving multiple experimental factors and measurements. Register here: https://www.eventbrite.com/e/introduction-to-r-tickets-34994825465 2017-07-12 23:00:00 UTC 2017-07-13 06:00:00 UTC Monash Bioinformatics Platform Room E365 (Level 3, East wing, 20 Chancellors Walk- Menzies Building), Monash University Clayton Campus, Wellington Road, Clayton, Australia Room E365 (Level 3, East wing, 20 Chancellors Walk- Menzies Building), Monash University Clayton Campus, Wellington Road Clayton Australia Bioinformatics Monash University [] [] workshops_and_courses [] bioinformatics R-programming
  • Biomolecular data mining: a hands-on training

    11 - 13 September 2017

    Antwerpen, Belgium

    Elixir node event
    Biomolecular data mining: a hands-on training https://tess.elixir-europe.org/events/biomolecular-data-mining-a-hands-on-training This course aims to introduce the core principles and biomedical applications of different data mining and machine learning techniques in a hands-on manner. It will tackle both unsupervised (clustering, frequent pattern mining, data projection) and supervised (classification) techniques. The methods that will be seen include hierarchical clustering, k- means clustering, item set mining, association rule mining, principle component analysis, support vector machines, random forests, bayesian networks and artificial neural networks. Attendees will be introduced to the basic operations of these data mining techniques, with a focus on the practical use and interpretation of these procedures rather than the mathematical formulas. In addition, attendants will be introduced to some important data processing and performance evaluation methods related to these data mining techniques. The software used in this course will be R. The course itself will consist of 50% theory lessons, 40% hands-on practicals and 10% application case studies. Organised by biomina: Dr. Pieter Meysman Prof. dr. Kris Laukens 2017-09-11 09:00:00 UTC 2017-09-13 17:00:00 UTC biomina Antwerpen Groenenborgerlaan, Antwerpen, Belgium Antwerpen Groenenborgerlaan Antwerpen Antwerpen Belgium 2020 Biomedical science Machine learning Data mining University of Antwerp Dr. Pieter Meysman Prof. dr. Kris Laukens ELIXIR Belgium and Flemish Region PhD studentsPostDocs 30 workshops_and_courses registration_of_interest []
  • Functional Plant Bioinformatics - PLAZA

    14 - 15 September 2017

    Ghent, Belgium

    Elixir node event
    Functional Plant Bioinformatics - PLAZA https://tess.elixir-europe.org/events/functional-plant-bioinformatics-plaza 2017-09-14 10:00:00 UTC 2017-09-15 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center, Ghent, Belgium Bio-Accelerator Meeting Center Ghent Belgium 9052 [] [] [] [] [] []
  • Python for Data Processing

    5 - 6 October 2017

    Heverlee, Belgium

    Elixir node event
    Python for Data Processing https://tess.elixir-europe.org/events/python-for-data-processing 2017-10-05 09:30:00 UTC 2017-10-06 17:00:00 UTC VIB Bioinformatics Core ICTS Education Center KUL Leslokaal A, Heverlee, Belgium ICTS Education Center KUL Leslokaal A Heverlee Belgium 3001 [] [] [] [] [] []
  • Introduction to gene regulation

    9 October 2017

    Gent, Belgium

    Elixir node event
    Introduction to gene regulation https://tess.elixir-europe.org/events/introduction-to-gene-regulation 2017-10-09 09:30:00 UTC 2017-10-09 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Gent, Belgium Bio-Accelerator Gent Belgium 9052 [] [] [] [] [] []
  • Electronic Lab Notebook Introduction Ghent

    25 October 2017

    Gent, Belgium

    Elixir node event
    Electronic Lab Notebook Introduction Ghent https://tess.elixir-europe.org/events/electronic-lab-notebook-introduction-ghent-fcc80d61-9755-4fe2-8067-00f12ea03c2f 2017-10-25 10:00:00 UTC 2017-10-25 12:00:00 UTC VIB Bioinformatics Core PC Room V114 First floor front building VIB Research Building, Gent, Belgium PC Room V114 First floor front building VIB Research Building Gent Belgium 9052 [] [] [] [] [] []
  • Analysis of public microarray data using Genevestigator

    24 November 2017

    Gent, Belgium

    Elixir node event
    Analysis of public microarray data using Genevestigator https://tess.elixir-europe.org/events/analysis-of-public-microarray-data-using-genevestigator 2017-11-24 09:30:00 UTC 2017-11-24 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Gent, Belgium Bio-Accelerator Gent Belgium 9052 [] [] [] [] [] []
  • Analysis of metabolome data

    15 January 2018

    Ghent, Belgium

    Elixir node event
    Analysis of metabolome data https://tess.elixir-europe.org/events/analysis-of-metabolome-data This training is intended for people who have a basic knowledge of R. Participants who have never worked with R should first follow the course Basic statistics in R.  The morning session will handle differences affecting data handling between GC-MS and LC-MS.  2018-01-15 09:30:00 UTC 2018-01-15 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
Note, this map only displays events that have geolocation information in TeSS.
For the complete list of events in TeSS, click the grid tab.