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189 events found

Content provider: NBIS  or de.NBI  or GOBLET 

  • de.NBI Summer School on Cloud Computing for Bioinformatics

    No date given

    de.NBI Summer School on Cloud Computing for Bioinformatics https://tess.elixir-europe.org/events/de-nbi-summer-school-on-cloud-computing-for-bioinformatics [] [] [] [] [] []
  • DNA Methylation: Design to Discovery

    No date given

    DNA Methylation: Design to Discovery https://tess.elixir-europe.org/events/dna-methylation-design-to-discovery [] [] [] [] [] []
  • 5th Galaxy high-throughput sequencing (HTS) data analysis workshop

    No date given

    5th Galaxy high-throughput sequencing (HTS) data analysis workshop https://tess.elixir-europe.org/events/5th-galaxy-high-throughput-sequencing-hts-data-analysis-workshop [] [] [] [] [] []
  • Computation and statistics for mass spectrometry and proteomics

    No date given

    Computation and statistics for mass spectrometry and proteomics https://tess.elixir-europe.org/events/computation-and-statistics-for-mass-spectrometry-and-proteomics [] [] [] [] [] []
  • 2nd de.NBI Bioimage Analysis Workshop

    5 - 6 December 2016

    2nd de.NBI Bioimage Analysis Workshop https://tess.elixir-europe.org/events/2nd-de-nbi-bioimage-analysis-workshop 2016-12-05 09:00:00 UTC 2016-12-06 00:00:00 UTC [] [] [] [] [] []
  • Hackathon – Fiji, ImageJ, and KNIME development

    6 - 16 December 2016

    Hackathon – Fiji, ImageJ, and KNIME development https://tess.elixir-europe.org/events/hackathon-fiji-imagej-and-knime-development 2016-12-06 09:00:00 UTC 2016-12-16 00:00:00 UTC [] [] [] [] [] []
  • IPB Metabolomics workshop 2016 - Christmas Edition

    8 - 9 December 2016

    IPB Metabolomics workshop 2016 - Christmas Edition https://tess.elixir-europe.org/events/ipb-metabolomics-workshop-2016-christmas-edition 2016-12-08 09:00:00 UTC 2016-12-09 00:00:00 UTC [] [] [] [] [] []
  • Galaxy RNA-sequencing data analysis workshop

    15 - 16 December 2016

    Galaxy RNA-sequencing data analysis workshop https://tess.elixir-europe.org/events/galaxy-rna-sequencing-data-analysis-workshop 2016-12-15 09:00:00 UTC 2016-12-16 00:00:00 UTC [] [] [] [] [] []
  • QIIME Contribution Fest

    9 - 10 January 2017

    QIIME Contribution Fest https://tess.elixir-europe.org/events/qiime-contribution-fest 2017-01-09 09:00:00 UTC 2017-01-10 00:00:00 UTC [] [] [] [] [] []
  • Deployment of bioinformatics tools and services from Computational Proteomics – Part II: Standard formats in proteomics, data conversions and repository upload – EuBIC Winter School

    10 January 2017

    Deployment of bioinformatics tools and services from Computational Proteomics – Part II: Standard formats in proteomics, data conversions and repository upload – EuBIC Winter School https://tess.elixir-europe.org/events/deployment-of-bioinformatics-tools-and-services-from-computational-proteomics-part-ii-standard-formats-in-proteomics-data-conversions-and-repository-upload-eubic-winter-school 2017-01-10 09:00:00 UTC 2017-01-10 00:00:00 UTC [] [] [] [] [] []
  • Label-free quantification and quality control with OpenMS

    12 January 2017

    Label-free quantification and quality control with OpenMS https://tess.elixir-europe.org/events/label-free-quantification-and-quality-control-with-openms 2017-01-12 09:00:00 UTC 2017-01-12 00:00:00 UTC [] [] [] [] [] []
  • European Galaxy Developer Workshop

    16 - 19 January 2017

    European Galaxy Developer Workshop https://tess.elixir-europe.org/events/european-galaxy-developer-workshop-462b2fb9-ba0e-431c-a7af-50e3bf3f0c26 2017-01-16 09:00:00 UTC 2017-01-19 00:00:00 UTC [] [] [] [] [] []
  • Bioinformatics Introductory course

    16 January - 21 March 2017

    Uppsala, Sweden

    Bioinformatics Introductory course https://tess.elixir-europe.org/events/bioinformatics-introductory-course Objective: The course aims to give a solid basis in basic bioinformatics methods. It covers the theories, algorithms and practical applications of computer-based methodology for the analysis of Nucleic and protein sequences. On completion of the course, the student should be able to: - account for the fundamental concepts within bioinformatics - independently carry out homology analyses of both protein - and DNA sequences and interpret the results - use the most common commands in Unix/Linux, - independently build a "workbench" for bioinformatics with publicly available software suited to the students own needs, - use biological databases - independently use technologies and analysis of Next Generation Sequencing data. and - manage methods for the analysis of expression data. Content: The course covers bioinformatics methods such as theories, algorithms and practical applications in computer-based methodology for the analysis of DNA and protein sequences. The course also covers theories for the analysis of RNAseq expression data and different analytical methods related to Next Generation Sequencing. Topics to be covered includes: biological databases, homology analyses, gene analyses (emphasis on software packages like e.g. EMBOSS and UGENE), web-based analytical tools, Unix OS, comparative genomics, functional genomics, GWAS analysis, molecular evolution, RNAseq expression analysis, annotation of new genomes. The course is based on lectures, exercises and project work. Apart from the written and the oral examination, compulsory components occur within e. g. exercises, project work and laboratory sessions. 2017-01-16 13:55:00 UTC 2017-03-21 13:55:00 UTC Swedish University of Agricultural Sciences Uppsala Biocenter, Uppsala, Sweden Uppsala Biocenter Uppsala Uppsala Sweden [] [] [] workshops_and_courses [] []
  • 3rd Galaxy High-Throughput-Sequencing (HTS) data analysis workshop

    13 - 17 February 2017

    3rd Galaxy High-Throughput-Sequencing (HTS) data analysis workshop https://tess.elixir-europe.org/events/3rd-galaxy-high-throughput-sequencing-hts-data-analysis-workshop 2017-02-13 09:00:00 UTC 2017-02-17 00:00:00 UTC [] [] [] [] [] []
  • 6th Programming for Evolutionary Biology Course

    4 - 20 March 2017

    6th Programming for Evolutionary Biology Course https://tess.elixir-europe.org/events/6th-programming-for-evolutionary-biology-course 2017-03-04 09:00:00 UTC 2017-03-20 00:00:00 UTC [] [] [] [] [] []
  • Lipidomics: A Workshop about Lipid Function & Analysis

    5 March 2017

    Lipidomics: A Workshop about Lipid Function & Analysis https://tess.elixir-europe.org/events/lipidomics-a-workshop-about-lipid-function-analysis 2017-03-05 09:00:00 UTC 2017-03-05 00:00:00 UTC [] [] [] [] [] []
  • 1st Freiburg Software Carpentry Course

    9 - 10 March 2017

    1st Freiburg Software Carpentry Course https://tess.elixir-europe.org/events/1st-freiburg-software-carpentry-course 2017-03-09 09:00:00 UTC 2017-03-10 00:00:00 UTC [] [] [] [] [] []
  • RNA-seq, 1 hp

    13 - 16 March 2017

    Elixir node event
    RNA-seq, 1 hp https://tess.elixir-europe.org/events/rna-seq-1-hp-bb9f6240-741a-4ea8-aa48-deda7e1198b4 Course content This course will cover both theoretical and hands-on exposure to current topics in RNA-seq analysis. Lectures from experts in RNA-seq and biostatistics will cover a range of cutting-edge issues in RNA quality control, transcript assembly in model and non-model organisms, differential expression analysis and downstream analysis using other types of data. An extensive case study in the computer lab will familiarize you with concepts of mapping, quality control of your RNA-seq data, de novo assembly, assembly using a reference, differential expression analysis and downstream enrichment analysis. Topics covered will include: Gene and isoform detection using short RNA-seq reads Gene and isoform detection using long RNA-seq reads Gene and isoform detection combining RNA-seq data with other data sources Quality assessment of RNA-seq data Differential expression analysis using RNA-seq data on multiple cells Downstream analysis after identifying differentially expressed genes. 2017-03-13 09:00:00 UTC 2017-03-16 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Introduction into the Analysis of Mass Spectrometry and Sequence Data with KNIME

    17 March 2017

    Introduction into the Analysis of Mass Spectrometry and Sequence Data with KNIME https://tess.elixir-europe.org/events/introduction-into-the-analysis-of-mass-spectrometry-and-sequence-data-with-knime 2017-03-17 09:00:00 UTC 2017-03-17 00:00:00 UTC [] [] [] [] [] []
  • R Programming Foundations for Life Scientists, 2 hp

    27 March - 1 April 2017

    Elixir node event
    R Programming Foundations for Life Scientists, 2 hp https://tess.elixir-europe.org/events/r-programming-foundations-for-life-scientists-2-hp-56fa30d4-110b-45eb-a88c-682e65f58c51 Course content The course is addressed to life scientists with little or moderate experience in programming but enthusiastic about learning how to use R to make their work smoother and easier. The course covers fundamental concepts of programming and software design focusing on programming in R. We will go through various aspects of R scripting with some more attention paid to the parts useful for life scientists. After introductory lectures on good programming practices, basic software design theory and a brief overview of R, we will delve into programming. We start by learning how to use R as a simple calculator, what are variable types, how to use data structures, how to implement repeating actions with and without loops, how to take actions based on certain condition. We gradually proceed to loading data, importing data from common file formats, we do some basic matrix algebra; learn how to perform basic statistical tests and how to visualize results. We will also put stress on giving you tools to access help and information on R-related challenges and issues, we will spend some time on learning how to install external packages, how to find bugs and address common installation issues. We also mention some more advanced topics and tell you more about BioConductor that is an invaluable tool for a computational biologist. You will also learn how to document your work and how to generate automatic reports. We try to illustrate all these concepts with some real-life examples and interesting lab tasks. The course will be given by experienced computational biologists from SciLifeLab and Uppsala University. Dr. Marcin Kierczak responsible for the content of the course is an experienced R user/coder, who has previously developed R packages and has experience in teaching programming and R to different audiences. 2017-03-27 09:00:00 UTC 2017-04-01 00:00:00 UTC [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • BRENDA Workshop 2017

    30 - 31 March 2017

    BRENDA Workshop 2017 https://tess.elixir-europe.org/events/brenda-workshop-2017 2017-03-30 09:00:00 UTC 2017-03-31 00:00:00 UTC [] [] [] [] [] []
  • Using Next Generation Sequencing Data Analysis for the Clinic - CASyM winter school of Systems Medicine

    31 March 2017

    Using Next Generation Sequencing Data Analysis for the Clinic - CASyM winter school of Systems Medicine https://tess.elixir-europe.org/events/using-next-generation-sequencing-data-analysis-for-the-clinic-casym-winter-school-of-systems-medicine 2017-03-31 09:00:00 UTC 2017-03-31 00:00:00 UTC [] [] [] [] [] []
  • Advanced R Programming

    3 - 4 April 2017

    Advanced R Programming https://tess.elixir-europe.org/events/advanced-r-programming 2017-04-03 09:00:00 UTC 2017-04-04 00:00:00 UTC [] [] [] [] [] []
  • Special Aspects of Bioinformatics for Proteomics - Proteomic Forum 2017

    3 April 2017

    Special Aspects of Bioinformatics for Proteomics - Proteomic Forum 2017 https://tess.elixir-europe.org/events/special-aspects-of-bioinformatics-for-proteomics-proteomic-forum-2017 2017-04-03 09:00:00 UTC 2017-04-03 00:00:00 UTC [] [] [] [] [] []
  • OpenMS & KNIME - Proteomic Forum 2017

    3 April 2017

    OpenMS & KNIME - Proteomic Forum 2017 https://tess.elixir-europe.org/events/openms-knime-proteomic-forum-2017 2017-04-03 09:00:00 UTC 2017-04-03 00:00:00 UTC [] [] [] [] [] []
  • de.NBI - ELIXIR AAI Codefest - Make your services accessible via ELIXIR AAI

    4 - 5 April 2017

    de.NBI - ELIXIR AAI Codefest - Make your services accessible via ELIXIR AAI https://tess.elixir-europe.org/events/de-nbi-elixir-aai-codefest-make-your-services-accessible-via-elixir-aai 2017-04-04 09:00:00 UTC 2017-04-05 00:00:00 UTC [] [] [] [] [] []
  • Protein identification in mass spectrometry data using SearchGUI and PeptideShaker - Proteomic Forum 2017

    4 April 2017

    Protein identification in mass spectrometry data using SearchGUI and PeptideShaker - Proteomic Forum 2017 https://tess.elixir-europe.org/events/protein-identification-in-mass-spectrometry-data-using-searchgui-and-peptideshaker-proteomic-forum-2017 2017-04-04 09:00:00 UTC 2017-04-04 00:00:00 UTC [] [] [] [] [] []
  • Proteomics and Metabolomics with OpenMS

    1 - 3 May 2017

    Proteomics and Metabolomics with OpenMS https://tess.elixir-europe.org/events/proteomics-and-metabolomics-with-openms 2017-05-01 09:00:00 UTC 2017-05-03 00:00:00 UTC [] [] [] [] [] []
  • MoMA Workshop

    2 - 3 May 2017

    MoMA Workshop https://tess.elixir-europe.org/events/moma-workshop 2017-05-02 09:00:00 UTC 2017-05-03 00:00:00 UTC [] [] [] [] [] []
  • ELIXIR/GOBLET/GTN hackathon for Galaxy training material re-use

    22 - 24 May 2017

    ELIXIR/GOBLET/GTN hackathon for Galaxy training material re-use https://tess.elixir-europe.org/events/elixir-goblet-gtn-hackathon-for-galaxy-training-material-re-use-0ee16689-cd8e-4c02-af86-714e1e1e062b 2017-05-22 09:00:00 UTC 2017-05-24 00:00:00 UTC [] [] [] [] [] []
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