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  • Metabolomics: Understanding Metabolism in the 21st Century

    23 September - 18 October 2019

    Edgbaston, United Kingdom

    Elixir node event
    Metabolomics: Understanding Metabolism in the 21st Century https://tess.elixir-europe.org/events/metabolomics-understanding-metabolism-in-the-21st-century-8c9cebe4-268d-4e19-9073-3a9d99e51df5 This online course explores metabolomics, an emerging field that aims to measure the complement of metabolites (the metabolome) in living organisms. The metabolome represents the downstream effect of an organism's... 2019-09-23 09:00:00 UTC 2019-10-18 23:59:00 UTC Online, Edgbaston, United Kingdom Online Edgbaston United Kingdom B15 2TT [] [] [] [] [] []
  • Galaxy HTS data analysis workshop in Freiburg

    23 - 28 September 2019

    Galaxy HTS data analysis workshop in Freiburg https://tess.elixir-europe.org/events/galaxy-hts-data-analysis-workshop-in-freiburg 2019-09-23 09:00:00 UTC 2019-09-28 00:00:00 UTC [] Freiburg Galaxy Team [] [] [] [] []
  • Multiple biofluid and tissue types, from sample preparation to analysis strategies for metabolomics

    25 - 27 September 2019

    Birmingham, United Kingdom

    Elixir node event
    Multiple biofluid and tissue types, from sample preparation to analysis strategies for metabolomics https://tess.elixir-europe.org/events/multiple-biofluid-and-tissue-types-from-sample-preparation-to-analysis-strategies-for-metabolomics This 3-day course will provide a comprehensive theoretical overview and hands-on training for the range of methods applied for sample preparation of complex biological samples for analysis applying LC-MS analysis. The course will be led by experts in the field to illustrate the different approaches that are available to analyse a range of biological samples and apply complementary liquid chromatography approaches to maximise the coverage of the metabolome. The course will be taught by experts in metabolomics who have experience of the analysis of microbial, plant and mammalian samples. 2019-09-25 09:00:00 UTC 2019-09-27 00:00:00 UTC Birmingham Metabolomics Training Centre, Birmingham, United Kingdom Birmingham Metabolomics Training Centre Birmingham United Kingdom B15 2TT [] [] [] [] [] []
  • Multiple Biofluid and Tissue Types, From Sample Preparation to Analysis Strategies for Metabolomics

    25 - 27 September 2019

    Birmingham, United Kingdom

    Elixir node event
    Multiple Biofluid and Tissue Types, From Sample Preparation to Analysis Strategies for Metabolomics https://tess.elixir-europe.org/events/multiple-biofluid-and-tissue-types-from-sample-preparation-to-analysis-strategies-for-metabolomics-243914d0-27d4-46a1-bc95-4e513ae0fbb3 This 3-day course provides a theoretical overview and hands-on training to apply multiple sample preparation and UPLC-MS methods to characterise the metabolomes of complex biological samples using the mass spec... 2019-09-25 09:00:00 UTC 2019-09-27 15:30:00 UTC School of Biosciences - University of Birmingham, Birmingham, United Kingdom School of Biosciences - University of Birmingham Birmingham United Kingdom B15 2TT [] [] [] [] [] []
  • Bioconda Collaboration Fest

    30 September - 2 October 2019

    Bioconda Collaboration Fest https://tess.elixir-europe.org/events/bioconda-collaboration-fest 2019-09-30 09:00:00 UTC 2019-10-02 00:00:00 UTC [] Freiburg Galaxy Team [] [] [] [] []
  • GalaxyNL Face2Face Meeting

    3 - 4 October 2019

    GalaxyNL Face2Face Meeting https://tess.elixir-europe.org/events/galaxynl-face2face-meeting 2019-10-03 09:00:00 UTC 2019-10-04 00:00:00 UTC [] Saskia Hiltemann [] [] [] [] []
  • Using Galaxy for RNA-seq

    8 - 9 October 2019

    Using Galaxy for RNA-seq https://tess.elixir-europe.org/events/using-galaxy-for-rna-seq 2019-10-08 09:00:00 UTC 2019-10-09 00:00:00 UTC [] Lieven Sterck, Tuur Muyldermans [] [] [] [] []
  • Galaxy for linking bisulfite sequencing with RNA sequencing

    9 - 12 October 2019

    Freiburg im Breisgau, Germany

    Galaxy for linking bisulfite sequencing with RNA sequencing https://tess.elixir-europe.org/events/galaxy-for-linking-bisulfite-sequencing-with-rna-sequencing-7b7b1d40-b65b-4694-a5c7-9613dfb3e2c7 Educators: Konstantin Riege (Jena), Steve Hoffmann (Jena), Steffen C. Lott (Freiburg), Wolfgang Hess (Freiburg), Andrea Bagnacani (Rostock), Markus Wolfien (Rostock), Olaf Wolkenhauer (Rostock) (RBC / de.STAIR) Date: 9.-11.10.2019 Location: Albert-Ludwigs-Universität Freiburg, Schänzlestraße 1, 79104 Freiburg im Breisgau Contents: In this training course, we introduce the Galaxy framework (https://usegalaxy.eu) for biomedical data analyses, and showcase its tools for data handling and preprocessing, differential gene expression analysis, bisulfite sequencing analysis, and Oxford Nanopore data exploration and usage. Lectures will be provided on the topics of RNA and Bisulfite sequencing, Epigenetics, and basic statistics, and followed by hands-on sessions. Finally, we showcase a Galaxy Docker installation for customized workflow analysis. Learning goals: - Know your data, and the implications of data preprocessing and quality control - Performing differential gene expression analysis using Galaxy - Performing differential methylation analysis using Galaxy - Handling and analyze Oxford Nanopore sequencing data Prerequisites: This workshop is intended for MSc/PhD students, postdocs, and researchers with a background in Life Science research. During registration, please hand over a poster about a research topic of your choosing. Posters will be presented during our poster session, which you can use to exchange experiences with other participants. Keywords: Galaxy, Workflow development, Differential gene expressionanalysis, differential methylation analysis, Epigenetics, Oxford Nanopore Tools: Galaxy (https://usegalaxy.eu), Galaxy Training material (https://galaxyproject.github.io/training-material/) Contact: destair@leibniz-fli.de Register: https://www.leibniz-fli.de/de/news-events/seminare/news-detailpage/news/denbidestair-training-course-galaxy-for-linking-bisulfite-sequencing-with-rna-sequencing-1/ 2019-10-09 09:00:00 UTC 2019-10-12 00:00:00 UTC de.NBI Freiburg im Breisgau, Freiburg im Breisgau, Germany Freiburg im Breisgau Freiburg im Breisgau Freiburg Germany [] destair [at] leibniz-fli.de [] [] [] [] []
  • Introduction to Metabolomics for the Microbiologist

    9 - 11 October 2019

    Birmingham, United Kingdom

    Elixir node event
    Introduction to Metabolomics for the Microbiologist https://tess.elixir-europe.org/events/introduction-to-metabolomics-for-the-microbiologist-610da160-7cff-4be4-8e8d-5fdb5dda50c5 This three-day course introduces how untargeted metabolomics can be applied to study microbial systems in academic and industrial research. The course provides an overview of the metabolomics pipeline, experimental... 2019-10-09 09:15:00 UTC 2019-10-11 16:00:00 UTC School of Biosciences - University of Birmingham, Birmingham, United Kingdom School of Biosciences - University of Birmingham Birmingham United Kingdom B15 2TT [] [] [] [] [] []
  • Reproducible and Transparent Genomic Analysis with Galaxy

    14 - 19 October 2019

    Reproducible and Transparent Genomic Analysis with Galaxy https://tess.elixir-europe.org/events/reproducible-and-transparent-genomic-analysis-with-galaxy 2019-10-14 09:00:00 UTC 2019-10-19 00:00:00 UTC [] Jeremy Goecks, Dan Blankenberg, Mohammad Heydarian [] [] [] [] []
  • Metabolomics Data Processing and Data Analysis

    21 October - 15 November 2019

    Birmingham, United Kingdom

    Elixir node event
    Metabolomics Data Processing and Data Analysis https://tess.elixir-europe.org/events/metabolomics-data-processing-and-data-analysis-e8f98f61-45aa-432d-b65a-b94867d6886d This online course explores the tools and approaches that are used to process and analyse metabolomics data. You will investigate the challenges that are typically encountered in the analysis of metabolomics data... 2019-10-21 09:00:00 UTC 2019-11-15 23:59:00 UTC Online, Birmingham, United Kingdom Online Birmingham United Kingdom B15 2TT [] [] [] [] [] []
  • Introduction to Metabolomics for the Clinical Scientist

    25 October 2019

    Birmingham, United Kingdom

    Elixir node event
    Introduction to Metabolomics for the Clinical Scientist https://tess.elixir-europe.org/events/introduction-to-metabolomics-for-the-clinical-scientist-b43defc4-bb00-4b8e-9a15-3a2f7e634bc0 This 1-day course in partnership with the Phenome Centre Birmingham provides clinicians with an overview of the metabolomics pipeline, highlighting the benefits of this technique to the medical field. 2019-10-25 09:45:00 UTC 2019-10-25 16:15:00 UTC School of Biosciences - University of Birmingham, Birmingham, United Kingdom School of Biosciences - University of Birmingham Birmingham United Kingdom B15 2TT [] [] [] [] [] []
  • Genomic data science with the Galaxy workbench

    30 - 31 October 2019

    Genomic data science with the Galaxy workbench https://tess.elixir-europe.org/events/genomic-data-science-with-the-galaxy-workbench 2019-10-30 09:00:00 UTC 2019-10-31 00:00:00 UTC [] Mo Heydarian, Dave Clements [] [] [] [] []
  • Metabolomics with the Q Exactive

    4 - 6 November 2019

    Birmingham, United Kingdom

    Elixir node event
    Metabolomics with the Q Exactive https://tess.elixir-europe.org/events/metabolomics-with-the-q-exactive-b48060e4-345d-43be-be3f-ea24fb58b55c This 3-day course introduces you to using the Q Exactive mass spectrometer in your metabolomics investigations. The course is led by experts in the field of metabolomics and includes lectures, laboratory sessions... 2019-11-04 09:00:00 UTC 2019-11-06 15:45:00 UTC School of Biosciences - University of Birmingham, Birmingham, United Kingdom School of Biosciences - University of Birmingham Birmingham United Kingdom B15 2TT [] [] [] [] [] []
  • Methylation Data Analysis

    6 November 2019

    Methylation Data Analysis https://tess.elixir-europe.org/events/creating-scientific-figures For more details please see https://www.bioinformatics.babraham.ac.uk/cgi-bin/public/course_dates.cgi. Course status: Spaces Available. 2019-11-06 09:30:00 UTC 2019-11-06 17:30:00 UTC Babraham Campus Babraham Campus CB22 3AT [] mailto:babraham.bioinformatics@babraham.ac.uk [] [] [] [] []
  • Metabolite Identification with the Q Exactive and LTQ Orbitrap Elite

    7 - 8 November 2019

    Birmingham, United Kingdom

    Elixir node event
    Metabolite Identification with the Q Exactive and LTQ Orbitrap Elite https://tess.elixir-europe.org/events/metabolite-identification-with-the-q-exactive-and-ltq-orbitrap-elite This 2-day course provides a hands-on approach to teach attendees about the latest techniques and tools available to perform metabolite identification in non-targeted metabolomics studies. The course is led by experts... 2019-11-07 09:00:00 UTC 2019-11-08 17:30:00 UTC School of Biosciences - University of Birmingham, Birmingham, United Kingdom School of Biosciences - University of Birmingham Birmingham United Kingdom B15 2TT [] [] [] [] [] []
  • NGS & Cancer : Analyses épigénomiques

    20 - 23 November 2019

    NGS & Cancer : Analyses épigénomiques https://tess.elixir-europe.org/events/ngs-amp-cancer-analyses-epigenomiques 2019-11-20 09:00:00 UTC 2019-11-23 00:00:00 UTC [] Groupe de travail NGS & Cancer [] [] [] [] []
  • Single cell RNA-seq analysis: From questions to clusters

    27 November - 2 December 2019

    Single cell RNA-seq analysis: From questions to clusters https://tess.elixir-europe.org/events/formation-metabarcoding-2019 2019-11-27 09:00:00 UTC 2019-12-02 00:00:00 UTC [] Marina Pujol [] [] [] [] []
  • Formation metabarcoding 2019

    2 - 7 December 2019

    Formation metabarcoding 2019 https://tess.elixir-europe.org/events/single-cell-rna-seq-analysis-from-questions-to-clusters-672fb157-9c0d-4a98-889c-a513868fca8c 2019-12-02 09:00:00 UTC 2019-12-07 00:00:00 UTC [] Laure Quintric, Patrick Durand, Erwan Corre [] [] [] [] []
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