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  • ECCB 2014

    7 - 10 September 2015

    Strasbourg, France

    Elixir node event
    ECCB 2014 https://tess.elixir-europe.org/events/eccb-2014 EMBL-EBI will be exhibiting at ECCB 2014 in Strasbourg. We look forward to meeting you at booth 9 during the conference. 2014-09-07 09:00:00 UTC 2015-09-10 00:00:00 UTC Strasbourg Convention Centre, Strasbourg, France Strasbourg Convention Centre Strasbourg France 67000 [] Katrina Costa [] [] [] [] HDRUK
  • European Galaxy Developer Workshop

    16 - 19 January 2017

    Strasbourg, France

    Elixir node event
    European Galaxy Developer Workshop https://tess.elixir-europe.org/events/european-galaxy-developer-workshop European edition of the Galaxy for Bioinformatics Workshop 2017-01-16 09:00:00 UTC 2017-01-19 00:00:00 UTC IFB Strasbourg, France, Strasbourg, France Strasbourg, France Strasbourg Bas-Rhin France Bioengineering [] egdw2017.oc@groupes.france-bioinformatique.fr [] software developers, bioinformaticians workshops_and_courses registration_of_interest []
  • Genopole Summer School

    4 - 7 July 2017

    Seine-Port, France

    Elixir node event
    Genopole Summer School https://tess.elixir-europe.org/events/bioinformatic-and-biostatistic-tools-in-medical-genomics Bioinformatic and Biostatistic tools in medical genomics 2017-07-04 09:00:00 UTC 2017-07-07 00:00:00 UTC Genopole, IFB and France Genomique Châteauform' Seine Port (77), Seine-Port, France Châteauform' Seine Port (77) Seine-Port Seine-et-Marne France 77240 Medicines research and development Metagenomics Functional genomics [] goo.gl/bzEdQ2 [] BioinformaticiansResearcher in life sciences workshops_and_courses first_come_first_served Statistical-model Variant-callingSNPbioinformaticsBiomarker discoverymetagenomicsNext generation sequencing data analysisWorkflowscomputer-science
  • Elixir Board Meeting

    13 November 2017

    Paris, France

    Elixir node event
    Elixir Board Meeting https://tess.elixir-europe.org/events/elixir-board-meeting-paris This meeting is only open to the ELIXIR Board and Observers. 2017-11-13 09:00:00 UTC 2017-11-13 00:00:00 UTC Paris, France, Paris, France Paris, France Paris France [] [] [] meetings_and_conferences [] []
  • ELIXIR Innovation and SME Forum: Data Driven Innovation in Rare Diseases and Personalised Medicine

    14 November 2017

    France

    Elixir node event
    ELIXIR Innovation and SME Forum: Data Driven Innovation in Rare Diseases and Personalised Medicine https://tess.elixir-europe.org/events/elixir-innovation-and-sme-forum-data-driven-innovation-in-rare-diseases-and-personalised-medicine IFB will host the next ELIXIR Innovation and SME Forum: Data Driven Innovation in Rare Diseases Personalised Medicine. 2017-11-14 09:00:00 UTC 2017-11-14 00:00:00 UTC Paris, France, France Paris, France France [] [] [] meetings_and_conferences [] []
  • EMBL-EBI resources and tools for genomics and proteomics

    4 - 8 December 2017

    Puławy, Poland

    Elixir node event
    EMBL-EBI resources and tools for genomics and proteomics https://tess.elixir-europe.org/events/embl-ebi-resources-and-tools-for-genomics-and-proteomics In this course participants will explore EMBL-EBI data and resources for genomes, functional genomics, sequences, protein structure and function, and protein-ligand interactions. 2017-12-04 09:00:00 UTC 2017-12-08 00:30:00 UTC National Veterinary Research Institute, Puławy, Poland National Veterinary Research Institute Puławy Poland 24-100 [] Malgorzata Olejnik [] [] [] [] HDRUK
  • Ensembl Browser Workshop, Montpellier, 11 December 2018

    11 December 2018

    Montpellier, France

    Elixir node event
    Ensembl Browser Workshop, Montpellier, 11 December 2018 https://tess.elixir-europe.org/events/ensembl-browser-workshop-montpellier-11-december-2018 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, comparative genomics and regulation data, mine these data with BioMart, upload custom data and use track hubs. The workshop will also provide an introduction to variation data, which will be covered in more detail in the 'Ensembl Variation and the 1000 Genomes project' workshop in Montpellier on 12 December 2018. 2018-12-11 09:00:00 UTC 2018-12-11 17:00:00 UTC University of Montpellier, Montpellier, France University of Montpellier Montpellier France 34093 [] Astrid Gall [] [] [] [] HDRUK
  • Ensembl Variation and the 1000 Genomes project, Montpellier, 12 December 2018

    12 December 2018

    Montpellier, France

    Elixir node event
    Ensembl Variation and the 1000 Genomes project, Montpellier, 12 December 2018 https://tess.elixir-europe.org/events/ensembl-variation-and-the-1000-genomes-project-montpellier-12-december-2018 Work with the Ensembl Outreach team to get to grips with Ensembl variation resources and tools such as the Variant Effect Predictor (VEP) and Linkage Disequilibrium Calculator. Learn how high-throughput sequencing was applied by the 1000 Genomes Project and how this work continues with the International Genome Sample Resource (IGSR). 2018-12-12 09:00:00 UTC 2018-12-12 17:00:00 UTC University of Montpellier, Montpellier, France University of Montpellier Montpellier France 34093 [] Astrid Gall [] [] [] [] HDRUK
  • Course single-cell transcriptomics and epigenomics 2019

    3 - 8 February 2019

    Roscoff, France

    Elixir node event
    Course single-cell transcriptomics and epigenomics 2019 https://tess.elixir-europe.org/events/course-single-cell-transcriptomics-and-epigenomics-2019 Duration The workshop will take place 3 - 8 February 2019 at Station Biologique de Roscoff, France Objectives This workshop focuses on the large-scale study of heterogeneity across individual cells from a genomic, transcriptomic and epigenomic point of view. New technological developments enable the characterization of molecular information at a single cell resolution for large numbers of cells. The high dimensional omics data that these technologies produce come with novel methodological challenges for the analysis. In this regard, specific bioinformatics and statistical methods have been developed in order to extract robust information. The workshop aims to provide such methods for engineers and researchers directly involved in functional genomics project making use of single-cell. A wide range of single cell topics will be covered in lectures, demonstrations and practical classes. Among others, the areas and issues to be addressed will include the choice of the most appropriate single-cell sequencing technology, the experimental design and the bioinformatics and statistical methods and pipelines. Audience This course is directed towards engineers and researchers who regularly need to undertake single-cell data analysis as well as PhD Student and Post Doc in computational biology or bioinformatics that are interested in the development of methods and pipelines for highly dimensional single-cell data analysis. Working environment Unix command will be used for bioinformatic analysis, and R programming language for statistical analysis. Requirements Understanding of bioinformatics tools and pipelines for next generation sequencing data (RNA-seq or Hi-C or ATAC-seq bulk). Participants must have prior experience on NGS data analysis with R and basic Unix command line skills. Registration Deadline : 15th novembre 2018 (participants selection: end of November 2018). As the number of participants is limited (30 participants), the steering committee will retain candidates on the basis of the information inquired on the registration form. Frais d’inscription pour les personnels académiques Registration fees. A) Academy/University: 600€HT=720€TTC ; B) Private sector: 1.750€HT=2.100€TTC. The registration fee includes accommodation and meals. Scientific coordination:​ ​ Marc Deloger (Institut Curie, INSERM U900, Mines ParisTech), Marie-Agnès Dillies, C3BI (USR 3756 IP CNRS), Agnès Paquet, UCAGenomiX (IPMC CNRS), Antonio Rausell (Institut Imagine, INSERM UMR-1163), Nicolas Servant (Institut Curie, INSERM U900, Mines ParisTech), Morgane Thomas-Chollier, IBENS (CNRS UMR8197, ENS, INSERM U1024). Technical coordination :​ ​ Erwan Corre (ABIMS FR2424 CNRS-UPMC, Station Biologique de Roscoff) Administrative management​ :​ ​ C3BI (Institut Pasteur) 2019-02-03 09:00:00 UTC 2019-02-08 17:00:00 UTC Marc Deloger, Marie-Agnès Dillies, Agnès Paquet, Antonio Rausell, Nicolas Servant, Morgane Thomas-Chollier Station Biological De Roscoff, Place Georges Teissier, Roscoff, France Station Biological De Roscoff, Place Georges Teissier Roscoff Finistère France 29680 [] inceptionifbfrance genomique [] 30 workshops_and_courses registration_of_interest []
  • Manual curation of Transposable element annotation

    3 - 5 February 2019

    Versailles, France

    Elixir node event
    Manual curation of Transposable element annotation https://tess.elixir-europe.org/events/manual-curation-of-transposable-element-annotation URGI organizes a BYOD-­style (Bring Your Own Data) training course on manual curation of transposable elements reference sequences 2019-02-03 09:00:00 UTC 2019-02-05 00:00:00 UTC INRA, URGI platform INRA, URGI, Bat 18 ­ Route de Saint­Cyr ­ RD10, Versailles, France INRA, URGI, Bat 18 ­ Route de Saint­Cyr ­ RD10 Versailles France 78000 [] urgi-contact@inra.fr [] Bioinformatician, Bioanalysts 10 workshops_and_courses registration_of_interest []
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