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EMBO Practical Course on Analysis of High-Throughput Sequencing Data
23 - 29 October 2011
Cambridge, United Kingdom
EMBO Practical Course on Analysis of High-Throughput Sequencing Data http://www.ebi.ac.uk/training/handson/course_111023_microarray.html#__1 https://tess.elixir-europe.org/events/embo-practical-course-on-analysis-of-high-throughput-sequencing-data-0acc8405-1ba5-4544-ba0d-fde8888123fc 2011-10-23 00:00:00 UTC 2011-10-29 00:00:00 UTC EMBL-EBI EBI IT-Training Room, Cambridge, United Kingdom EBI IT-Training Room Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
Conference on Semantics in Healthcare and Life Sciences
22 - 24 February 2012
Cambridge, United States of America
Conference on Semantics in Healthcare and Life Sciences http://www.iscb.org/cshals2012 https://tess.elixir-europe.org/events/conference-on-semantics-in-healthcare-and-life-sciences-1dda0eba-092d-45a5-a5b1-b147311def55 2012-02-22 09:00:00 UTC 2012-02-24 00:00:00 UTC ISCB Cambridge, United States of America Cambridge United States of America Bioinformatics [] [] [] meetings_and_conferences [] [] -
Cambridge Computational Biology Institute Annual Symposium
25 May 2012
Cambridge, United Kingdom
Cambridge Computational Biology Institute Annual Symposium http://www.ccbi.cam.ac.uk/Events/Workshops/symp_12.php https://tess.elixir-europe.org/events/cambridge-computational-biology-institute-annual-symposium 2012-05-25 00:00:00 UTC 2012-05-25 00:00:00 UTC CCBI Centre for Mathematical Sciences, Cambridge, United Kingdom Centre for Mathematical Sciences Cambridge United Kingdom Bioinformatics [] [] [] meetings_and_conferences [] [] -
PhytoPath Training Course
20 - 21 September 2012
Cambridge, United Kingdom
PhytoPath Training Course http://www.ebi.ac.uk/training/handson/course_120919_phytopath.html https://tess.elixir-europe.org/events/phytopath-training-course 2012-09-20 00:00:00 UTC 2012-09-21 00:00:00 UTC EMBL-EBI EMBL-EBI, Cambridge, United Kingdom EMBL-EBI Cambridge United Kingdom Genomics Bioinformatics [] [] [] workshops_and_courses [] [] -
Multiple Sequence Alignment and Analysis with Jalview
21 - 22 January 2013
Cambridge, United Kingdom
Multiple Sequence Alignment and Analysis with Jalview http://www.ebi.ac.uk/training/course/multiple-sequence-alignment-and-analysis-jalview-tutorial-and-hackathon https://tess.elixir-europe.org/events/multiple-sequence-alignment-and-analysis-with-jalview 2013-01-21 00:00:00 UTC 2013-01-22 00:00:00 UTC EMBL-EBI EMBL-EBI IT Training room, Cambridge, United Kingdom EMBL-EBI IT Training room Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
CSHALS 2013
21 - 23 February 2013
Cambridge, United States of America
CSHALS 2013 http://www.iscb.org/cshals2013 https://tess.elixir-europe.org/events/cshals-2013 2013-02-21 09:00:00 UTC 2013-02-23 00:00:00 UTC ISCB Cambridge, United States of America Cambridge United States of America Bioinformatics [] [] [] meetings_and_conferences [] ISCBEvent -
the 4th international meeting on Visualizing Biological Data
20 - 22 March 2013
Cambridge, United States of America
the 4th international meeting on Visualizing Biological Data http://vizbi.org/2013/ https://tess.elixir-europe.org/events/the-4th-international-meeting-on-visualizing-biological-data 2013-03-20 09:00:00 UTC 2013-03-22 00:00:00 UTC EMBO/NIH Broad Institute of MIT and Harvard, Cambridge, United States of America Broad Institute of MIT and Harvard Cambridge United States of America Bioinformatics [] [] [] meetings_and_conferences [] [] -
Bioinformatics: R for molecular epidemiology of viruses
2 - 4 May 2013
Cambridge, United Kingdom
Bioinformatics: R for molecular epidemiology of viruses http://training.csx.cam.ac.uk/event/604279 https://tess.elixir-europe.org/events/bioinformatics-r-for-molecular-epidemiology-of-viruses 2013-05-02 00:00:00 UTC 2013-05-04 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Public health and epidemiology Bioinformatics [] [] [] workshops_and_courses [] [] -
Bioinformatics: Introduction to Phylogenetic Tree-Building
31 May - 1 June 2013
Cambridge, United Kingdom
Bioinformatics: Introduction to Phylogenetic Tree-Building http://training.csx.cam.ac.uk/event/629456 https://tess.elixir-europe.org/events/bioinformatics-introduction-to-phylogenetic-tree-building 2013-05-31 00:00:00 UTC 2013-06-01 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
Bioinformatics: Advanced R Programming
20 June 2013
Cambridge, United Kingdom
Bioinformatics: Advanced R Programming http://training.csx.cam.ac.uk/event/564997 https://tess.elixir-europe.org/events/bioinformatics-advanced-r-programming 2013-06-20 00:00:00 UTC 2013-06-20 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
Using the Ensembl Genome Browser
22 June 2013
Cambridge, United Kingdom
Using the Ensembl Genome Browser http://training.csx.cam.ac.uk/event/565106 https://tess.elixir-europe.org/events/using-the-ensembl-genome-browser 2013-06-22 00:00:00 UTC 2013-06-22 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
Bioinformatics: Analysing mapped NGS data with SeqMonk
6 July 2013
Cambridge, United Kingdom
Bioinformatics: Analysing mapped NGS data with SeqMonk http://training.csx.cam.ac.uk/event/659199 https://tess.elixir-europe.org/events/bioinformatics-analysing-mapped-ngs-data-with-seqmonk 2013-07-06 00:00:00 UTC 2013-07-06 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
Bioinformatics: A Practical User Introduction
23 - 25 July 2013
Cambridge, United Kingdom
Bioinformatics: A Practical User Introduction http://training.csx.cam.ac.uk/event/650170 https://tess.elixir-europe.org/events/bioinformatics-a-practical-user-introduction 2013-07-23 00:00:00 UTC 2013-07-25 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
Microarray Analysis with Bioconductor
29 - 31 August 2013
Cambridge, United Kingdom
Microarray Analysis with Bioconductor http://training.csx.cam.ac.uk/event/642742 https://tess.elixir-europe.org/events/microarray-analysis-with-bioconductor 2013-08-29 00:00:00 UTC 2013-08-31 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
Genome Annotation with Artemis
27 September 2013
Cambridge, United Kingdom
Genome Annotation with Artemis http://training.csx.cam.ac.uk/event/565131 https://tess.elixir-europe.org/events/genome-annotation-with-artemis 2013-09-27 00:00:00 UTC 2013-09-27 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Genomics Bioinformatics [] [] [] workshops_and_courses [] [] -
Microme Workshop on Microbial Metabolism
8 - 10 October 2013
Cambridge, United Kingdom
Microme Workshop on Microbial Metabolism http://www.ebi.ac.uk/training/course/bacterial-genomics https://tess.elixir-europe.org/events/microme-workshop-on-microbial-metabolism 2013-10-08 01:00:00 UTC 2013-10-10 01:00:00 UTC EMBL-EBI Cambridge, United Kingdom Cambridge United Kingdom Metabolomics Bioinformatics [] [] [] workshops_and_courses [] [] -
Genome-wide Approaches with Fission Yeast
7 - 14 December 2013
Cambridge, United Kingdom
Genome-wide Approaches with Fission Yeast http://www.wellcome.ac.uk/Education-resources/Courses-and-conferences/Advanced-Courses-and-Scientific-Conferences/Advanced-Courses/WTX033405.htm?utm_source=Adestra&utm_medium=email&utm_content=Genome-wide%20Approaches%20with%20Fission%20Yeast&utm_campaign=Upcoming%20deadlines%20%28July%202013%29 https://tess.elixir-europe.org/events/genome-wide-approaches-with-fission-yeast 2013-12-07 00:00:00 UTC 2013-12-14 00:00:00 UTC Wellcome Trust Cambridge, United Kingdom Cambridge United Kingdom Proteomics Genomics Bioinformatics [] [] [] workshops_and_courses [] [] -
Multiple Sequence Alignment and Phylogenetics
19 - 20 December 2013
Cambridge, United Kingdom
Multiple Sequence Alignment and Phylogenetics http://training.csx.cam.ac.uk/event/564938 https://tess.elixir-europe.org/events/multiple-sequence-alignment-and-phylogenetics 2013-12-19 00:00:00 UTC 2013-12-20 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
Malaria Experimental Genetics
9 - 15 February 2014
Cambridge, United Kingdom
Malaria Experimental Genetics http://www.wellcome.ac.uk/Education-resources/Courses-and-conferences/Advanced-Courses-and-Scientific-Conferences/Advanced-Courses/WTVM051209.htm?utm_source=Adestra&utm_medium=email&utm_content=Malaria%20Experimental%20Genetics&utm_campaign=Upcoming%20deadlines%20%28July%202013%29 https://tess.elixir-europe.org/events/malaria-experimental-genetics-c515cabc-03b7-410a-a928-158777845a54 2014-02-09 00:00:00 UTC 2014-02-15 00:00:00 UTC Wellcome Trust Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
Mathematical Models for Infectious Disease Dynamics
10 - 21 February 2014
Cambridge, United Kingdom
Mathematical Models for Infectious Disease Dynamics http://www.wellcome.ac.uk/Education-resources/Courses-and-conferences/Advanced-Courses-and-Scientific-Conferences/Advanced-Courses/WTVM051202.htm?utm_source=Adestra&utm_medium=email&utm_content=Mathematical%20Models%20for%20Infectious%20Disease%20Dynamics&utm_campaign=Upcoming%20deadlines%20%28July%202013%29 https://tess.elixir-europe.org/events/mathematical-models-for-infectious-disease-dynamics-6fc1446e-8554-4d20-b866-579772559d1b 2014-02-10 00:00:00 UTC 2014-02-21 00:00:00 UTC Wellcome Trust Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] [] -
Visualisation of Biological Data (VIZBI) 2015
25 - 27 March 2015
Cambridge, United States of America
Visualisation of Biological Data (VIZBI) 2015 http://vizbi.org/2015/ https://tess.elixir-europe.org/events/visualisation-of-biological-data-vizbi-2015 2015-03-25 09:00:00 UTC 2015-03-27 00:00:00 UTC Cambridge, United States of America Cambridge United States of America Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents -
Chromatin Structure and Function
26 October - 4 November 2015
Cambridge, United Kingdom
Chromatin Structure and Function http://www.wellcome.ac.uk/Education-resources/Courses-and-conferences/Advanced-Courses-and-Scientific-Conferences/Advanced-Courses/WTP055912.htm?utm_source=Adestra&utm_medium=email&utm_content=Chromatin%20Structure%20and%20Function&utm_campaign=Upcoming%20deadlines%20%28June/July%202015%29 https://tess.elixir-europe.org/events/chromatin-structure-and-function 2015-10-26 00:00:00 UTC 2015-11-04 00:00:00 UTC Wellcome Trust Cambridge, United Kingdom Cambridge United Kingdom Genomics Bioinformatics [] [] [] workshops_and_courses [] [] -
Analysis of mapped NGS data with SeqMonk
3 February 2016
Cambridge, United Kingdom
Analysis of mapped NGS data with SeqMonk http://training.csx.cam.ac.uk/bioinformatics/event/1572361 https://tess.elixir-europe.org/events/analysis-of-mapped-ngs-data-with-seqmonk-43412e62-e3fc-4434-a56e-41cec9577dbf [SeqMonk](http://www.bioinformatics.babraham.ac.uk/projects/seqmonk/) is a graphical program for the visualisation and analysis of large mapped sequencing datasets such as ChIP-Seq, RNA-Seq, and BS-Seq. The program allows you to view your reads against an annotated genome and to quantitate and filter your data to let you identify regions of interest. It is a friendly way to explore and analysis very large datasets. This course provides an introduction to the main features of SeqMonk and will run through the analysis of a couple of different datasets to show what sort of analysis options it provides. Further information is available [here](http://www.bioinformatics.babraham.ac.uk/training.html#seqmonk). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Analysing%20mapped%20NGS%20data%20with%20SeqMonk_bioinfo-seqmonk_03.02.2016_1572361&CourseName=Analysing%20mapped%20NGS%20data%20with%20SeqMonk&CourseDate=03.02.2016&CourseDuration=1&EventID=1572361).'' 2016-02-03 09:30:00 UTC 2016-02-03 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR RNA-Seq Exome sequencing Data mining Data visualisation ChIP-seq Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK -
APPLIED BIOINFORMATICS IN LIFE SCIENCES
17 - 18 March 2016
Leuven, Belgium
APPLIED BIOINFORMATICS IN LIFE SCIENCES http://www.vibconferences.be/event/applied-bioinformatics-in-life-sciences https://tess.elixir-europe.org/events/applied-bioinformatics-in-life-sciences-7d8b6f2b-7934-4340-8be1-6119ba154ef8 2016-03-17 00:00:00 UTC 2016-03-18 00:00:00 UTC Leuven, Belgium Leuven Belgium Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents -
Molecular Phylogenetics
20 - 22 April 2016
Cambridge, United Kingdom
Molecular Phylogenetics http://training.csx.cam.ac.uk/bioinformatics/event/1572213 https://tess.elixir-europe.org/events/molecular-phylogenetics-e59d127b-28f9-496b-8225-52f6bd013d78 The course will provide training for bench-based biologists to use molecular data to construct and interpret phylogenies, and test their hypotheses. Delegates will gain hands-on practice of using a variety of programs freely available online and commonly used in molecular studies, interspersed with some lectures. Course timetable is available [here](https://drive.google.com/file/d/0B5BzNXp93Gp5WURyTFRUUGplbzg/view?usp=sharing). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Molecular%20Phylogenetics_bioinfo-phylng_20-22.04.2016_1572213&CourseName=Molecular%20Phylogenetics&CourseDate=20-22.04.2016&CourseDuration=3&EventID=1572213).'' 2016-04-20 08:30:00 UTC 2016-04-22 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Phylogenetics Data visualisation Data mining Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK -
Variant Analysis with GATK
13 - 14 June 2016
Cambridge, United Kingdom
Variant Analysis with GATK http://training.csx.cam.ac.uk/bioinformatics/event/1572767 https://tess.elixir-europe.org/events/variant-analysis-with-gatk-3624e45d-cd74-4297-bc4c-d40298e39632 This workshop will focus on the core steps involved in calling variants with the [Broad’s Genome Analysis Toolkit](https://www.broadinstitute.org/gatk/), using the “Best Practices” developed by the GATK team. You will learn why each step is essential to the variant discovery process, what are the operations performed on the data at each step, and how to use the GATK tools to get the most accurate and reliable results out of your dataset. In the course of this workshop, we highlight key functionalities such as the GVCF workflow for joint variant discovery in cohorts, RNAseq specific processing, and somatic variant discovery using MuTect2. We also preview capabilities of the upcoming GATK version 4, including a new workflow for CNV discovery. The workshop is composed of one day of lectures (including many opportunities for Q&A) and one day of handson training. On the first day, we explain the rationale, theory and application of our Best Practices for Variant Discovery in high-throughput sequencing data. On the second day, we walk attendees through handson exercises that teach how to manipulate the standard data formats involved in variant discovery and how to apply GATK tools appropriately to various use cases and data types. In the course of these exercises, we demonstrate useful tips and tricks for interacting with GATK, dealing with problems, and using thirdparty tools such as Samtools, IGV and RStudio. Please note that this workshop is focused on human data analysis. The majority of the materials presented does apply equally to non human data, and we will address some questions regarding adaptations that are needed for analysis of non human data, but we will not go into much detail on those points. The timetable can be found [here](http://bioinfotraining.bio.cam.ac.uk/postgraduate/specialized/gatk). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Variant%20Analysis%20with%20GATK%20_13-14.06.2016_1572767&CourseName=Variant%20Analysis%20with%20GATK&CourseDate=13-14.06.2016&CourseDuration=2&EventID=1572767).'' 2016-06-13 08:30:00 UTC 2016-06-14 16:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Genomics Exome sequencing Data visualisation Data mining ChIP-seq Bioinformatics University of Cambridge Bioinformatics Training [] The lecture based component of the workshop is aimed at a mixed audience of people who are new to the topic of variant discovery or to GATKseeking an introductory course into the toolsor who are already GATK users seeking to improve their understanding of and proficiency with the tools.The handson component is aimed at novice to intermediate users who are seeking detailed guidance with GATK and related tools.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK -
An introduction to metabolomics and its application in life-sciences
20 - 21 June 2016
Cambridge, United Kingdom
An introduction to metabolomics and its application in life-sciences http://training.csx.cam.ac.uk/bioinformatics/event/1572627 https://tess.elixir-europe.org/events/an-introduction-to-metabolomics-and-its-application-in-life-sciences-e1cd9f51-270e-469e-98c9-47469364c8a3 The goal of metabolomics is to identify and quantify the complete biochemical composition of a biological sample. With the increase in genomic, transcriptomic and proteomic information there is a growing need to understand the metabolic phenotype that these genes and proteins ultimately control. The aim of this course is to provide an overview of metabolomics and its applications in life sciences, clinical and environmental settings. Over 2 days we will introduce different techniques used to extract metabolites and analyse samples to collect metabolomic data (such as HPLC or GC-based MS and NMR), present how to analyse such data, how to identify metabolites using online databases and how to map the metabolomic data to metabolic pathways. The course content will predominantly be based on analysing samples from model plant species such as Arabidopsis thaliana but the procedures are transferable to all other organisms, including clinical and environmental settings. A draft agenda can be found [here](https://bioinfotraining.bio.cam.ac.uk/postgraduate/specialized/bioinfo-metaintro). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=An%20introduction%20to%20metabolomics%20and%20its%20application%20in%20life-sciences_bioinfo-metaintro_20-21.06.2016_1572627&CourseName=An%20introduction%20to%20metabolomics%20and%20its%20application%20in%20life-sciences&CourseDate=20-21.06.2016&CourseDuration=2&EventID=1572627).'' 2016-06-20 08:30:00 UTC 2016-06-21 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Metabolomics Functional genomics Data visualisation Cell biology Bioinformatics University of Cambridge Bioinformatics Training [] This course is aimed at researchers with an interest in metabolomics and its applicationsGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK -
An Introduction to MATLAB for biologists
23 - 24 June 2016
Cambridge, United Kingdom
An Introduction to MATLAB for biologists http://training.csx.cam.ac.uk/bioinformatics/event/1619817 https://tess.elixir-europe.org/events/an-introduction-to-matlab-for-biologists-dfa68466-eb0e-4b57-9159-83dbf4735c0f This course aims to give you an introduction to the basics of Matlab. During the two day course we will use a practical based approach to give you the confidence to start using Matlab in your own work. In particular we will show you how to write your own scripts and functions and how to use pre-written functions. We will also explore the many ways in which help is available to Matlab users. In addition we will cover basic computer programming in Matlab to enable you to write more efficient scripts. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=An%20Introduction%20to%20MATLAB_bioinfo-MATLAB_23-24.06.2016_1619817&CourseName=An%20Introduction%20to%20MATLAB&CourseDate=23-24.06.2016&CourseDuration=2&EventID=1619817).'' 2016-06-23 08:30:00 UTC 2016-06-24 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Biology Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK -
Ensembl API workshop
27 - 30 June 2016
Cambridge, United Kingdom
Ensembl API workshop http://training.csx.cam.ac.uk/bioinformatics/event/1572305 https://tess.elixir-europe.org/events/ensembl-api-workshop-ed40cf61-1540-489d-9760-531b921ce731 The [Ensembl project](http://www.ensembl.org/) provides a comprehensive and integrated source of annotation of mainly vertebrate genome sequences. This workshop is aimed at researchers and developers interested in exploring Ensembl beyond the website. The workshop covers the core, compara, variation and functional genomics (regulation) databases and APIs. The Ensembl Perl API Documentation can be found [here](http://www.ensembl.org/info/docs/api/index.html). For each of these, the database schema and the API design as well as the most important objects and their methods will be presented. This will be followed by practical sessions in which the participants can put theoretical learning into practice by writing their own Perl scripts. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Ensembl%20API%20Workshop_bioinfo-ensdev_27-30.06.2016_1572305&CourseName=Ensembl%20API%20Workshop&CourseDate=27-30.06.2016&CourseDuration=4&EventID=1572305).'' 2016-06-27 08:30:00 UTC 2016-06-30 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Bioinformaticians and wet-lab biologists who can program in Perl.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK -
Interpreting the clinical genome with DECIPHER
8 July 2016
Cambridge, United Kingdom
Interpreting the clinical genome with DECIPHER http://training.csx.cam.ac.uk/bioinformatics/event/1734472 https://tess.elixir-europe.org/events/interpreting-the-clinical-genome-with-decipher [DECIPHER](https://decipher.sanger.ac.uk/) is a collaborative data sharing and interpretation platform that enables the secure upload, analysis and subsequent sharing of anonymised phenotype-linked patient variant data in rare genetic disorders. DECIPHER is a worldwide user community of over 250 clinical genetics centres and research groups from over 40 countries that utilise the built-in tools for aiding the interpretation of variants as well as to discover other patients that share similar phenotype and genomic findings. DECIPHER facilitates collaboration and exchange of information between a global community of clinical centers and researchers leading thereby accelerating discovery and diagnosis. Access to consented anonymised records is free to all users. User accounts are provided to bona-fide clinicians and lab scientists to enable deposition and sharing of anonymised patient data. The purpose of this half-day workshop is to acquaint participants with the DECIPHER website and database and introduce the various built-in tools for visualisation and interpretation of phenotype-linked genomic variation in anonymised consented patient data. It is hoped that by the end of this workshop, users will be able to carry out effective searches of data, use the built-in genome browser to visualise variation in context of other pathogenic and reference data sources, find other patients with similar variants and shared phenotypes, and identify most likely causes of phenotypic presentation by gene prioritisation. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Interpreting%20the%20clinical%20genome%20with%20DECIPHER_bioinfo-dec_08.07.2016_1734472&CourseName=Interpreting%20the%20clinical%20genome%20with%20DECIPHER&CourseDate=08.07.2016&CourseDuration=0.5&EventID=1734472).'' 2016-07-08 08:30:00 UTC 2016-07-08 11:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Rare diseases Genotype and phenotype Genomics Bioinformatics University of Cambridge Bioinformatics Training [] This course is suitable for all users who have an interest in Clinical Genetics with a special emphasis on rare disorders. It is also pertinent to those who seek to develop a better understanding of the role of accurate phenotyping in aiding the interpretation of filtered variants in patients and understanding genotype-phenotype correlations.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK

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