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  • Introduction to the analysis of NGS data, online

    21 May - 4 June 2021

    Leuven, Belgium

    Elixir node event
    Introduction to the analysis of NGS data, online https://tess.elixir-europe.org/events/introduction-to-the-analysis-of-ngs-data-online-1972b955-6863-42f5-887c-cd6090b1b227 This training is an introduction to a series of trainings on the analysis of Next Generation Sequencing data. This training is intended for newbies to the field and will teach them all background knowledge required to successfully complete the advanced NGS analysis trainings. To this end the training will give an overview of: - The Illumina platform - NGS data formats and file handling - Quality control of NGS data - Mapping of NGS data - Supporting IT: Galaxy and GenePattern platform 2021-05-21 09:00:00 UTC 2021-06-04 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Using MOFA for integration of omics data, online

    25 - 27 May 2021

    Gent, Belgium

    Elixir node event
    Using MOFA for integration of omics data, online https://tess.elixir-europe.org/events/using-mofa-for-integration-of-omics-data-online Participants can analyze their own data in the course. Both bulk and single cell applications will be discussed.  What kind of preprocessing of the data is required for MOFA? How to train MOFA on a multi-omic data set? How to interpret the MOFA factors by their loadings, using gene set enrichment or sample ordination? How to use MOFA for downstream analyses including regression, classification or clustering? How to impute missing values with MOFA? How to select the number of factors and compare different MOFA fits? 2021-05-25 09:00:00 UTC 2021-05-27 00:00:00 UTC VIB Bioinformatics Core iGent, Gent, Belgium iGent Gent Belgium 9052 [] [] [] [] [] []
  • Analysis of 16S rRNA metagenomic experiments, online

    14 - 16 June 2021

    Leuven, Belgium

    Elixir node event
    Analysis of 16S rRNA metagenomic experiments, online https://tess.elixir-europe.org/events/analysis-of-16s-rrna-metagenomic-experiments-online Processing and statistical analysis of 16S rRNA metagenomic experiments using R & Lotus pipeline. The following analytical steps from raw data to communicable results will be on the programme: - Preparation of sequencing data, read filtering, data cleaning - Data normalization - Numerical ecology: Clustering, Ordination, Diversity, Modelling - Univariate & Multivariate Statistics - Biological interpretation 2021-06-14 09:00:00 UTC 2021-06-16 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []

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