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65 events found
Event types: Workshops and courses
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Target audience: PhD students
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City: Heidelberg or Fribourg or Basel or Amsterdam UMC (location AMC) or Norwich or Utrecht or Lund or Geneva or Zurich
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First Steps with R in Life Sciences
12 - 13 March 2018
Basel, Switzerland
First Steps with R in Life Sciences https://www.sib.swiss/training/course/2018-03-R https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-696a4ac3-567e-4ab4-8e2f-9b69dd71c4a4 Overview R is a complete, flexible and open source system for statistical analysis and graphics, which has become a tool of choice for biologists and biomedical scientists who need to analyse and visualise large amounts of data. 2018-03-12 09:00:00 UTC 2018-03-13 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Intermediate R
8 - 9 May 2018
Basel, Switzerland
Intermediate R https://www.sib.swiss/training/course/intR-May2018 https://tess.elixir-europe.org/events/intermediate-r-8f879c18-ef16-45ea-b4d9-6ccddade9c13 The course is full with a waiting list. Overview This 2-day intermediate course will move beyond simple scripts/recipes towards a more systematic understanding of R and its data structures. 2018-05-08 09:00:00 UTC 2018-05-09 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Python for Life Scientists
16 - 18 May 2018
Geneva, Switzerland
Python for Life Scientists https://www.sib.swiss/training/course/2018-05-python https://tess.elixir-europe.org/events/python-for-life-scientists-cc33b56d-50cd-4c8e-bcf2-11d737c7258d This course is oversubscribed, but you can still apply and your name will be placed on the waiting list. Overview Python is an open-source and general-purpose scripting language which runs on all major operating systems. 2018-05-16 09:00:00 UTC 2018-05-18 00:00:00 UTC SIB, Geneva, Switzerland SIB Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Inferring gene regulatory networks from high-throughput data with ISMARA
23 May 2018
Basel, Switzerland
Inferring gene regulatory networks from high-throughput data with ISMARA https://www.sib.swiss/training/course/2018-05-reg-networks https://tess.elixir-europe.org/events/inferring-gene-regulatory-networks-from-high-throughput-data-with-ismara This course is oversubscribed, but you can apply by clicking in the boutton below. Your name will then be place on the waiting list, and you will be contacted only if a there is a cancellation. 2018-05-23 09:00:00 UTC 2018-05-23 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
First Steps in Parallelization with OpenMP
30 May 2018
Basel, Switzerland
First Steps in Parallelization with OpenMP https://www.sib.swiss/training/course/OpenMP-Basel2018 https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp This course is currently full. Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. 2018-05-30 09:00:00 UTC 2018-05-30 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to high-performance computing (sciCORE cluster)
6 June 2018
Basel, Switzerland
Introduction to high-performance computing (sciCORE cluster) https://www.sib.swiss/training/course/sciCORE-LinuxHPC-June2018 https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-2b1ff111-035e-451e-9164-c7bad6762df4 Overview This full-day course (9-17h) has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2018-06-06 09:00:00 UTC 2018-06-06 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Graphical Models: From Mathematical Foundations to Biological Applications
25 - 29 June 2018
Basel, Switzerland
Graphical Models: From Mathematical Foundations to Biological Applications https://www.bsse.ethz.ch/cbg/cbg-news/summerschool-2018.html https://tess.elixir-europe.org/events/graphical-models-from-mathematical-foundations-to-biological-applications 2018-06-25 09:00:00 UTC 2018-06-29 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Singularity containers: usage in HPC infrastructure
12 September 2018
Basel, Switzerland
Singularity containers: usage in HPC infrastructure https://www.sib.swiss/training/course/sciCORE-Singularity-Sep2018 https://tess.elixir-europe.org/events/singularity-containers-usage-in-scicore-infrastructure Overview Singularity containers are an alternative to Docker. They are better suited for HPC environments and can be used to package entire scientific workflows, software and libraries, and even data. 2018-09-12 09:00:00 UTC 2018-09-12 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Best practices in programming 2018
22 - 23 October 2018
Basel, Switzerland
Best practices in programming 2018 https://www.sib.swiss/training/course/2018-10-best-practices-programming https://tess.elixir-europe.org/events/best-practices-in-programming-2018 This workshop is organised by the SIB PhD Training Network. Priority is given to its members, but is open to everyone. 2018-10-22 09:00:00 UTC 2018-10-23 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Bioinformatics of long read sequencing
8 - 9 November 2018
Zurich, Switzerland
Bioinformatics of long read sequencing https://www.sib.swiss/training/course/2018-11-longreads https://tess.elixir-europe.org/events/bioinformatics-of-long-read-sequencing Please note that this course is over subscribed. 2018-11-08 09:00:00 UTC 2018-11-09 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to high-performance computing (sciCORE cluster)
13 November 2018
Basel, Switzerland
Introduction to high-performance computing (sciCORE cluster) https://www.sib.swiss/training/course/sciCORE-LinuxHPC-Nov2018 https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-baab21c6-5b82-44b8-91d6-563b873322ae Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2018-11-13 09:00:00 UTC 2018-11-13 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Protein Bioinformatics: Sequence-Structure-Function
14 - 16 November 2018
Basel, Switzerland
Protein Bioinformatics: Sequence-Structure-Function https://www.sib.swiss/training/course/2018-11-prot-bioinfo https://tess.elixir-europe.org/events/protein-bioinformatics-sequence-structure-function-9e65a268-c6f2-4781-9d65-847cc6ebe943 Overview Sequence-structure-function relationships of proteins are central to a comprehensive understanding of cellular biology. However, many proteins lack direct and detailed information regarding structure, function, and complex formation. 2018-11-14 09:00:00 UTC 2018-11-16 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to RNA-Seq
19 - 20 November 2018
Basel, Switzerland
Introduction to RNA-Seq https://www.sib.swiss/training/course/2018-11-rnaseq https://tess.elixir-europe.org/events/introduction-to-rna-seq-071a35a2-ab61-4a98-9657-0cf6702c57a0 This course is currently over-subscribed. 2018-11-19 09:00:00 UTC 2018-11-20 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
SPHN Data Privacy and IT Security Training
20 November 2018
Zurich, Switzerland
SPHN Data Privacy and IT Security Training https://www.sib.swiss/training/course/2018-11-sphn-security https://tess.elixir-europe.org/events/sphn-data-privacy-and-it-security-training Overview Within the Swiss Personalized Health Network (SPHN) and related national initiatives researchers use patient data (i.e., confidential human data) in their research projects. 2018-11-20 09:00:00 UTC 2018-11-20 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
First Steps in Parallelization with OpenMP
23 November 2018
Basel, Switzerland
First Steps in Parallelization with OpenMP https://www.sib.swiss/training/course/OpenMP-Basel2018Nov https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp-e3a91727-d7bc-4a02-a594-d7a8abbea5b8 Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. In order to benefit from this computational power we need to devise programs explicitly written for parallel machines. 2018-11-23 09:00:00 UTC 2018-11-23 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
High Performance Computing for genomic applications
26 - 27 November 2018
Zurich, Switzerland
High Performance Computing for genomic applications https://www.sib.swiss/training/course/2018-11-hpc-genomics https://tess.elixir-europe.org/events/high-performance-computing-for-genomic-applications-01f41c8d-a78f-4354-b37c-5a1ec697159b Overview The course "High Performance Computing for genomic applications" is organized for the D-BIOL researchers (including PhD students) by Scientific IT Services on 26-27 November 2018. 2018-11-26 09:00:00 UTC 2018-11-27 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Ligand-protein docking, and computer-aided drug design
27 - 28 November 2018
Basel, Switzerland
Ligand-protein docking, and computer-aided drug design https://www.sib.swiss/training/course/2018-11-cadd https://tess.elixir-europe.org/events/ligand-protein-docking-and-computer-aided-drug-design-c4340004-674a-4d34-9583-9d9cb5afd7a2 Overview This workshop aims to present basics on molecular visualization, ligand-protein docking and several computer-aided drug design tools developed at SIB. Numerous case examples are taken from different therapeutic fields. 2018-11-27 09:00:00 UTC 2018-11-28 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Statistics for Life Scientists
3 - 6 December 2018
Basel, Switzerland
Statistics for Life Scientists https://www.sib.swiss/training/course/2018-12-stats https://tess.elixir-europe.org/events/statistics-for-life-scientists-fe0dfb55-a12e-4606-9679-15a4f5c85310 Overview Statistics are an integral aspect of scientific research, particularly for the life sciences which rely heavily on quantitative methodologies. 2018-12-03 09:00:00 UTC 2018-12-06 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Single-Cell RNAseq
3 - 7 December 2018
Norwich, United Kingdom
Single-Cell RNAseq http://www.earlham.ac.uk/single-cell-rnaseq-training-course https://tess.elixir-europe.org/events/single-cell-rnaseq-workshop The course provides an introduction to Single Cell Genomics. It covers several aspects such as the experimental design, cell sorting and processing for production of quality samples for sequencing, generation of sequencing data, assessing the quality of sequence data, data visualisation, differential expression analyses and identifying Copy Number Variants at the single cell level. 2018-12-03 09:00:00 UTC 2018-12-07 17:00:00 UTC Earlham Institute Earlham Institute (EI), Colney Lane, Norwich, United Kingdom Earlham Institute (EI), Colney Lane Norwich Norfolk United Kingdom NR4 7UZ Cell biology RNA-Seq [] training@earlham.ac.uk [] PhD studentspost-docsWet-lab Researchers workshops_and_courses [] [] -
High Performance Computing for genomic applications
13 - 14 December 2018
Basel, Switzerland
High Performance Computing for genomic applications https://www.sib.swiss/training/course/2018-12-hpc-genomics https://tess.elixir-europe.org/events/high-performance-computing-for-genomic-applications-c002fd44-1a7c-4462-91ee-5ebb00a2a6e4 Overview The course "High Performance Computing for genomic applications" is organized for the D-BIOL researchers (including PhD students) by Scientific IT Services on 13-14 December 2018. 2018-12-13 09:00:00 UTC 2018-12-14 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to the LabKey data management tool
15 January 2019
Basel, Switzerland
Introduction to the LabKey data management tool https://www.sib.swiss/training/course/IntroToLabKey-2019Jan https://tess.elixir-europe.org/events/introduction-to-data-management-with-labkey Overview LabKey is a data management platform in which researchers can collaboratively manage and analyze their data. LabKey Server is ideal for groups looking to transition to a more robust solution when working in Excel becomes unmanageable. 2019-01-15 09:00:00 UTC 2019-01-15 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to statistics
22 - 25 January 2019
Zurich, Switzerland
Introduction to statistics https://www.sib.swiss/training/course/2019-01-intro-stats https://tess.elixir-europe.org/events/introduction-to-statistics-ffd2c538-293c-4e8d-87c5-f3e6801a564e Please note that this course is full. Overview This course is designed to provide researchers in biomedical sciences with experience in the application of basic statistical analysis techniques to a variety of biological problems. 2019-01-22 09:00:00 UTC 2019-01-25 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to the LabKey data management tool
4 February 2019
Basel, Switzerland
Introduction to the LabKey data management tool https://www.sib.swiss/training/course/IntroToLabKey-2019Feb https://tess.elixir-europe.org/events/introduction-to-the-labkey-data-management-tool Overview LabKey is a data management platform in which researchers can collaboratively manage and analyze their data. LabKey Server is ideal for groups looking to transition to a more robust solution when working in Excel becomes unmanageable. 2019-02-04 09:00:00 UTC 2019-02-04 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
R-packaging
5 February 2019
Zurich, Switzerland
R-packaging https://www.sib.swiss/training/course/2019-02-r-packaging https://tess.elixir-europe.org/events/r-packaging-7d99e72f-ed13-45f7-807c-8903907185c0 This course is full. Overview In this course, R programmers will learn how to create R packages, the best way to make R scripts reusable. Participants will learn how to identify and create clear, clean and usable packages in R. 2019-02-05 09:00:00 UTC 2019-02-05 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Workshop on Computational Biology at biology'19
6 February 2019
Zurich, Switzerland
Workshop on Computational Biology at biology'19 https://www.sib.swiss/training/course/2019-02-compbio19 https://tess.elixir-europe.org/events/workshop-on-computational-biology-at-biology-19 Overview SIB is co-organizing a workshop on computational biology on 6 Feb 2019 in Zurich, as a satellite event to Biology 2019, the annual Swiss conference on ecology, evolution, systematics and conservation. 2019-02-06 09:00:00 UTC 2019-02-06 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Introduction to high-performance computing (sciCORE cluster)
13 February 2019
Basel, Switzerland
Introduction to high-performance computing (sciCORE cluster) https://www.sib.swiss/training/course/sciCORE-LinuxHPC-Feb2019 https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-807fed7d-d148-4f7b-b854-913d4135836c Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2019-02-13 09:00:00 UTC 2019-02-13 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Deep learning for digital pathology image analysis (practicals and lectures)
14 March 2019
Basel, Switzerland
Deep learning for digital pathology image analysis (practicals and lectures) https://www.sib.swiss/training/course/2019_03_DL_digpath_practicals https://tess.elixir-europe.org/events/deep-learning-for-digital-pathology-image-analysis-practicals-and-lectures This course is now over-subscribed with a waiting list. 2019-03-14 09:00:00 UTC 2019-03-14 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Deep learning for digital pathology image analysis (lectures only)
14 March 2019
Basel, Switzerland
Deep learning for digital pathology image analysis (lectures only) https://www.sib.swiss/training/course/2019_03_DL_digpath_lectures https://tess.elixir-europe.org/events/deep-learning-for-digital-pathology-image-analysis-lectures-only This course is now over-subscribed with a waiting list. 2019-03-14 09:00:00 UTC 2019-03-14 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
Best practices in HPC (sciCORE cluster)
27 March 2019
Basel, Switzerland
Best practices in HPC (sciCORE cluster) https://www.sib.swiss/training/course/BestHPC-sciCORE https://tess.elixir-europe.org/events/best-practices-in-hpc-scicore-cluster Overview This one-day course is a follow-up to the sciCORE course "Introduction to HPC (sciCORE cluster)". 2019-03-27 09:00:00 UTC 2019-03-27 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] [] -
SPHN Data Privacy and IT Security Training
2 April 2019
Basel, Switzerland
SPHN Data Privacy and IT Security Training https://www.sib.swiss/training/course/2019-04-sphn-security https://tess.elixir-europe.org/events/sphn-data-privacy-and-it-security-training-df60adc9-02da-4152-a56d-f3d5fa73078d Overview Within the Swiss Personalized Health Network (SPHN) and related national initiatives researchers use patient data (i.e., confidential human data) in their research projects. 2019-04-02 09:00:00 UTC 2019-04-02 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
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