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59 events found

Event types: Workshops and courses 

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Target audience: PhD 

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City: Heidelberg  or Fribourg  or Basel  or Amsterdam UMC (location AMC)  or Norwich  or Utrecht  or Lund  or Geneva  or Streamed from Bern  or Streamed from Basel and Zurich 

  • First Steps with R in Life Sciences

    12 - 13 March 2018

    Basel, Switzerland

    Elixir node event
    First Steps with R in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-696a4ac3-567e-4ab4-8e2f-9b69dd71c4a4 Overview R is a complete, flexible and open source system for statistical analysis and graphics, which has become a tool of choice for biologists and biomedical scientists who need to analyse and visualise large amounts of data. 2018-03-12 09:00:00 UTC 2018-03-13 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Intermediate R

    8 - 9 May 2018

    Basel, Switzerland

    Elixir node event
    Intermediate R https://tess.elixir-europe.org/events/intermediate-r-8f879c18-ef16-45ea-b4d9-6ccddade9c13 The course is full with a waiting list. Overview This 2-day intermediate course will move beyond simple scripts/recipes towards a more systematic understanding of R and its data structures. 2018-05-08 09:00:00 UTC 2018-05-09 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Python for Life Scientists

    16 - 18 May 2018

    Geneva, Switzerland

    Elixir node event
    Python for Life Scientists https://tess.elixir-europe.org/events/python-for-life-scientists-cc33b56d-50cd-4c8e-bcf2-11d737c7258d This course is oversubscribed, but you can still apply and your name will be placed on the waiting list. Overview Python is an open-source and general-purpose scripting language which runs on all major operating systems. 2018-05-16 09:00:00 UTC 2018-05-18 00:00:00 UTC SIB, Geneva, Switzerland SIB Geneva Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Inferring gene regulatory networks from high-throughput data with ISMARA

    23 May 2018

    Basel, Switzerland

    Elixir node event
    Inferring gene regulatory networks from high-throughput data with ISMARA https://tess.elixir-europe.org/events/inferring-gene-regulatory-networks-from-high-throughput-data-with-ismara This course is oversubscribed, but you can apply by clicking in the boutton below. Your name will then be place on the waiting list, and you will be contacted only if a there is a cancellation. 2018-05-23 09:00:00 UTC 2018-05-23 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • First Steps in Parallelization with OpenMP

    30 May 2018

    Basel, Switzerland

    Elixir node event
    First Steps in Parallelization with OpenMP https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp This course is currently full. Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. 2018-05-30 09:00:00 UTC 2018-05-30 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Introduction to high-performance computing (sciCORE cluster)

    6 June 2018

    Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-2b1ff111-035e-451e-9164-c7bad6762df4 Overview This full-day course (9-17h) has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2018-06-06 09:00:00 UTC 2018-06-06 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Graphical Models: From Mathematical Foundations to Biological Applications

    25 - 29 June 2018

    Basel, Switzerland

    Elixir node event
    Graphical Models: From Mathematical Foundations to Biological Applications https://tess.elixir-europe.org/events/graphical-models-from-mathematical-foundations-to-biological-applications 2018-06-25 09:00:00 UTC 2018-06-29 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Singularity containers: usage in HPC infrastructure

    12 September 2018

    Basel, Switzerland

    Elixir node event
    Singularity containers: usage in HPC infrastructure https://tess.elixir-europe.org/events/singularity-containers-usage-in-scicore-infrastructure Overview Singularity containers are an alternative to Docker. They are better suited for HPC environments and can be used to package entire scientific workflows, software and libraries, and even data. 2018-09-12 09:00:00 UTC 2018-09-12 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Best practices in programming 2018

    22 - 23 October 2018

    Basel, Switzerland

    Elixir node event
    Best practices in programming 2018 https://tess.elixir-europe.org/events/best-practices-in-programming-2018 This workshop is organised by the SIB PhD Training Network. Priority is given to its members, but is open to everyone. 2018-10-22 09:00:00 UTC 2018-10-23 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Introduction to high-performance computing (sciCORE cluster)

    13 November 2018

    Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-baab21c6-5b82-44b8-91d6-563b873322ae Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2018-11-13 09:00:00 UTC 2018-11-13 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Protein Bioinformatics: Sequence-Structure-Function

    14 - 16 November 2018

    Basel, Switzerland

    Elixir node event
    Protein Bioinformatics: Sequence-Structure-Function https://tess.elixir-europe.org/events/protein-bioinformatics-sequence-structure-function-9e65a268-c6f2-4781-9d65-847cc6ebe943 Overview Sequence-structure-function relationships of proteins are central to a comprehensive understanding of cellular biology. However, many proteins lack direct and detailed information regarding structure, function, and complex formation. 2018-11-14 09:00:00 UTC 2018-11-16 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Introduction to RNA-Seq

    19 - 20 November 2018

    Basel, Switzerland

    Elixir node event
    Introduction to RNA-Seq https://tess.elixir-europe.org/events/introduction-to-rna-seq-071a35a2-ab61-4a98-9657-0cf6702c57a0 This course is currently over-subscribed. 2018-11-19 09:00:00 UTC 2018-11-20 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • First Steps in Parallelization with OpenMP

    23 November 2018

    Basel, Switzerland

    Elixir node event
    First Steps in Parallelization with OpenMP https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp-e3a91727-d7bc-4a02-a594-d7a8abbea5b8 Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. In order to benefit from this computational power we need to devise programs explicitly written for parallel machines. 2018-11-23 09:00:00 UTC 2018-11-23 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Ligand-protein docking, and computer-aided drug design

    27 - 28 November 2018

    Basel, Switzerland

    Elixir node event
    Ligand-protein docking, and computer-aided drug design https://tess.elixir-europe.org/events/ligand-protein-docking-and-computer-aided-drug-design-c4340004-674a-4d34-9583-9d9cb5afd7a2 Overview This workshop aims to present basics on molecular visualization, ligand-protein docking and several computer-aided drug design tools developed at SIB. Numerous case examples are taken from different therapeutic fields. 2018-11-27 09:00:00 UTC 2018-11-28 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Statistics for Life Scientists

    3 - 6 December 2018

    Basel, Switzerland

    Elixir node event
    Statistics for Life Scientists https://tess.elixir-europe.org/events/statistics-for-life-scientists-fe0dfb55-a12e-4606-9679-15a4f5c85310 Overview Statistics are an integral aspect of scientific research, particularly for the life sciences which rely heavily on quantitative methodologies. 2018-12-03 09:00:00 UTC 2018-12-06 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • High Performance Computing for genomic applications

    13 - 14 December 2018

    Basel, Switzerland

    Elixir node event
    High Performance Computing for genomic applications https://tess.elixir-europe.org/events/high-performance-computing-for-genomic-applications-c002fd44-1a7c-4462-91ee-5ebb00a2a6e4 Overview The course "High Performance Computing for genomic applications" is organized for the D-BIOL researchers (including PhD students) by Scientific IT Services on 13-14 December 2018. 2018-12-13 09:00:00 UTC 2018-12-14 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Introduction to the LabKey data management tool

    15 January 2019

    Basel, Switzerland

    Elixir node event
    Introduction to the LabKey data management tool https://tess.elixir-europe.org/events/introduction-to-data-management-with-labkey Overview LabKey is a data management platform in which researchers can collaboratively manage and analyze their data. LabKey Server is ideal for groups looking to transition to a more robust solution when working in Excel becomes unmanageable. 2019-01-15 09:00:00 UTC 2019-01-15 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Introduction to the LabKey data management tool

    4 February 2019

    Basel, Switzerland

    Elixir node event
    Introduction to the LabKey data management tool https://tess.elixir-europe.org/events/introduction-to-the-labkey-data-management-tool Overview LabKey is a data management platform in which researchers can collaboratively manage and analyze their data. LabKey Server is ideal for groups looking to transition to a more robust solution when working in Excel becomes unmanageable. 2019-02-04 09:00:00 UTC 2019-02-04 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Introduction to high-performance computing (sciCORE cluster)

    13 February 2019

    Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-807fed7d-d148-4f7b-b854-913d4135836c Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2019-02-13 09:00:00 UTC 2019-02-13 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Deep learning for digital pathology image analysis (practicals and lectures)

    14 March 2019

    Basel, Switzerland

    Elixir node event
    Deep learning for digital pathology image analysis (practicals and lectures) https://tess.elixir-europe.org/events/deep-learning-for-digital-pathology-image-analysis-practicals-and-lectures This course is now over-subscribed with a waiting list. 2019-03-14 09:00:00 UTC 2019-03-14 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Deep learning for digital pathology image analysis (lectures only)

    14 March 2019

    Basel, Switzerland

    Elixir node event
    Deep learning for digital pathology image analysis (lectures only) https://tess.elixir-europe.org/events/deep-learning-for-digital-pathology-image-analysis-lectures-only This course is now over-subscribed with a waiting list. 2019-03-14 09:00:00 UTC 2019-03-14 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Best practices in HPC (sciCORE cluster)

    27 March 2019

    Basel, Switzerland

    Elixir node event
    Best practices in HPC (sciCORE cluster) https://tess.elixir-europe.org/events/best-practices-in-hpc-scicore-cluster Overview This one-day course is a follow-up to the sciCORE course "Introduction to HPC (sciCORE cluster)". 2019-03-27 09:00:00 UTC 2019-03-27 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • SPHN Data Privacy and IT Security Training

    2 April 2019

    Basel, Switzerland

    Elixir node event
    SPHN Data Privacy and IT Security Training https://tess.elixir-europe.org/events/sphn-data-privacy-and-it-security-training-df60adc9-02da-4152-a56d-f3d5fa73078d Overview Within the Swiss Personalized Health Network (SPHN) and related national initiatives researchers use patient data (i.e., confidential human data) in their research projects. 2019-04-02 09:00:00 UTC 2019-04-02 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • First Steps in Parallelization with OpenMP

    8 May 2019

    Basel, Switzerland

    Elixir node event
    First Steps in Parallelization with OpenMP https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp-1bbfd630-8e6e-424b-93c3-692f1df61027 Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. In order to benefit from this computational power we need to devise programs explicitly written for parallel machines. 2019-05-08 09:00:00 UTC 2019-05-08 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • ELIXIR-EXCELERATE Train the trainer

    8 - 10 May 2019

    Basel, Switzerland

    Elixir node event
    ELIXIR-EXCELERATE Train the trainer https://tess.elixir-europe.org/events/elixir-excelerate-train-the-trainer-7b9d0389-490f-46f6-89af-697c998d655e ELIXIR-EXCELERATE is funded by the European Commission within the Research Infrastructures programme of Horizon 2020, grant agreement number 676559 Overview This course offers guidance, ideas and tips for designing training/teaching, 2019-05-08 09:00:00 UTC 2019-05-10 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Live Long-Read sequencing and data analysis

    15 - 17 May 2019

    Fribourg, Switzerland

    Elixir node event
    Live Long-Read sequencing and data analysis https://tess.elixir-europe.org/events/live-long-read-sequencing-and-analysis More information here 2019-05-15 09:00:00 UTC 2019-05-17 00:00:00 UTC SIB, Fribourg, Switzerland SIB Fribourg Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Introduction to high-performance computing (sciCORE cluster)

    19 June 2019

    Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-cac27254-dfeb-42a0-a82c-1ae2209b38c4 Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2019-06-19 09:00:00 UTC 2019-06-19 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • SIB PhD Training Network Annual Retreat

    24 - 26 June 2019

    Fribourg, Switzerland

    Elixir node event
    SIB PhD Training Network Annual Retreat https://tess.elixir-europe.org/events/sib-phd-training-network-annual-retreat-09268123-5621-4f87-b0bd-7ed24ab7783e This course is exclusively reserved to the members of the SIB PhD Training Network. 2019-06-24 09:00:00 UTC 2019-06-26 00:00:00 UTC SIB, Fribourg, Switzerland SIB Fribourg Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Introduction to RNA-Seq: From quality control to pathway analysis

    21 - 22 October 2019

    Basel, Switzerland

    Elixir node event
    Introduction to RNA-Seq: From quality control to pathway analysis https://tess.elixir-europe.org/events/introduction-to-rna-seq-9b1ad1ee-b319-4f6e-bdeb-6b6a297145b2 Overview This two-day course will present the theory and bioinformatics tools required to analyze RNA-seq gene expression data, from the raw data to the biological interpretation. 2019-10-21 09:00:00 UTC 2019-10-22 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

  • Best practices in programming 2019

    5 - 6 November 2019

    Basel, Switzerland

    Elixir node event
    Best practices in programming 2019 https://tess.elixir-europe.org/events/best-practices-in-programming-2019 This workshop is organised by the SIB PhD Training Network. Priority is given to its members, but is open to everyone. 2019-11-05 09:00:00 UTC 2019-11-06 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

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