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8 events found

Scientific topics: Metagenomics  or Transcriptomics 

and

City: Bogota  or Nijmegen  or Liverpool  or Norwich  or Warsaw  or Oeiras 

  • Workshop on Parallel Computational Biology (PBC 2013)

    9 - 12 September 2013

    Warsaw, Poland

    Workshop on Parallel Computational Biology (PBC 2013) https://tess.elixir-europe.org/events/workshop-on-parallel-computational-biology-pbc-2013 2013-09-09 00:00:00 UTC 2013-09-12 00:00:00 UTC Rutgers Discovery Informatics Institute Warsaw, Poland Warsaw Poland Proteomics Metagenomics Genomics Bioinformatics [] [] [] meetings_and_conferences [] OtherEventsISCB
  • RNA-seq data analysis

    30 October - 1 November 2013

    Nijmegen, Netherlands

    RNA-seq data analysis https://tess.elixir-europe.org/events/rna-seq-data-analysis 2013-10-30 00:00:00 UTC 2013-11-01 00:00:00 UTC NBIC Nijmegen, Netherlands Nijmegen Netherlands Metagenomics Bioinformatics [] [] [] workshops_and_courses [] []
  • Analysing RNA-seq data

    12 - 13 December 2013

    Norwich, United Kingdom

    Analysing RNA-seq data https://tess.elixir-europe.org/events/analysing-rna-seq-data 2013-12-12 00:00:00 UTC 2013-12-13 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom Transcriptomics Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Metagenomics Approaches and Data Analysis

    31 March - 2 April 2014

    Nijmegen, Netherlands

    Metagenomics Approaches and Data Analysis https://tess.elixir-europe.org/events/metagenomics-approaches-and-data-analysis-9e7658ad-ed80-41a2-a833-93ba61e99614 2014-03-31 01:00:00 UTC 2014-04-02 01:00:00 UTC Nijmegen, Netherlands Nijmegen Netherlands Metagenomics [] [] [] workshops_and_courses [] []
  • Chromosome structure determination using modelling and Hi-C data

    25 - 28 November 2014

    Oeiras, Portugal

    Chromosome structure determination using modelling and Hi-C data https://tess.elixir-europe.org/events/chromosome-structure-determination-using-modelling-and-hi-c-data 2014-11-25 09:00:00 UTC 2014-11-28 00:00:00 UTC GTPB Oeiras, Portugal Oeiras Portugal Metagenomics Bioinformatics [] [] [] workshops_and_courses [] []
  • Metagenomics: From bench to data analysis

    12 - 16 October 2015

    Norwich, United Kingdom

    Metagenomics: From bench to data analysis https://tess.elixir-europe.org/events/metagenomics-from-bench-to-data-analysis 2015-10-12 01:00:00 UTC 2015-10-16 01:00:00 UTC TGAC TGAC, Norwich, United Kingdom TGAC Norwich United Kingdom NR4 7UH Metagenomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • ADER17 - Analysis of Differential Expression with RNAseq

    17 April 2017

    Oeiras, Portugal

    Elixir node event
    ADER17 - Analysis of Differential Expression with RNAseq https://tess.elixir-europe.org/events/ader17-analysis-of-differential-expression-with-rnaseq    IMPORTANT DATES for this Course   Deadline for applications: April 10th 2017   Course dates: April 17th - April 20th 2017 Candidates with adequate profile will be accepted in the next 72 hours after the application, until we reach 20 participants. Course description Overview High-throughput technologies allow us to detect transcripts present in a cell or tissue. This course covers practical aspects of the analysis of differential gene expression by RNAseq. Participants will be presented with real world examples and work with them in the training room, covering all the steps of RNAseq analysis, from planning the gathering of sequence data to the generation of tables of differentially expressed gene lists and visualization of results. We we will also cover some of the initial steps of secondary analysis, such as functional enrichment of the obtained gene lists. Target Audiences Life Scientists who want to be able to use NGS data to evaluate gene expression (RNAseq). Computational researchers that wish to get acquainted with the concepts and methodologies used in RNAseq are also welcome. Participants are encouraged to bring their own data and will have the opportunity to apply the concepts learned in the course. Pre-requisites Familiarity with elementary statistics and a few basics of scripting in R. Please have a look at the following resources and gauge your ability to use R in statitics at the basic level: Introduction to Data Science with R Videos from Coursera's four week course in R Statistics at Square One - BMJ Basic Unix command line skills, such as being able to navigate in a directory tree and copy files. See, for example, "Session 1" of the Software Carpentry training for a Unix introduction (Shell-novice material from the Software Carpentry Foundation). 2017-04-17 07:30:00 UTC 2017-04-17 07:30:00 UTC Pedro Fernandes Instituto Gulbenkian de Ciência, Oeiras, Portugal Instituto Gulbenkian de Ciência Oeiras Portugal 1000-029 Transcriptomics RNA-Seq [] bicourses@igc.gulbenkian.pt [] [] 20 workshops_and_courses registration_of_interest []
  • Microbiome Visualization with Biome-Shiny

    31 January 2020

    Oeiras, Portugal

    Elixir node event
    Microbiome Visualization with Biome-Shiny https://tess.elixir-europe.org/events/microbiome-visualization-with-biome-shiny BioData.pt Crash Course: Microbiome Visualization with Biome-Shiny is an introductory one-day workshop seeking to provide users with the knowledge to create, analyze and visualize microbiome data. The course consists of two parts: the first part, is an introduction to, and hands-on demonstration of, the DADA2 pipeline, which will be used to process a training dataset into a file that can be analyzed through the Biome-Shiny tool; the second part, employs the Biome-Shiny GUI to explore the obtained dataset's microbial community composition, as well as the alpha- and beta-diversity of the dataset, and download their results for later use. By the end of this course, participants should be able to apply the DADA2 algorithm to process their own sequenced reads, as well as employ Biome-Shiny as a GUI-based solution to explore their data and produce a final report. 2020-01-31 09:30:00 UTC 2020-01-31 17:30:00 UTC BioData.pt / Instituto Gulbenkian de Ciência Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande, Oeiras, Portugal Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande Oeiras Portugal Metagenomics Instituto Gulbenkian de Ciência, Biodata.pt - Elixir's portuguese node of the european projec info@biodata.pt [] PhD students and post-docs who want to learn the basics of microbiome analysis in Bioinformatics, and have little knowledge of programming. workshops_and_courses first_come_first_served []

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