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368 events found

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  • Galaxy Australasia Meeting

    3 - 9 February 2017

    Melbourne, Austria

    Galaxy Australasia Meeting https://tess.elixir-europe.org/events/galaxy-australasia-meeting The conference starts 4 February and features two full days of keynotes, accepted and sponsor talks, poster and sponsor sessions, birds­-of-­a­-feather gatherings, the conference dinner, and lots of opportunities for networking. The meeting is preceded by a Researcher Training Day on 3 February aimed at biomedical researchers who need to do bioinformatic analysis. Finally, the meeting is followed by a four day Galaxy Admin Training session for those installing and maintaining Galaxy servers. 2017-02-03 09:00:00 UTC 2017-02-09 00:00:00 UTC EMBl-ABR Lab-14, Melbourne, Austria Lab-14 Melbourne Austria Bioinformatics [] [] [] meetings_and_conferences [] ABRBioinformaticslifescience
  • Software Carpentry - Introduction to Programming in R

    8 August 2017

    Melbourne, Australia

    Software Carpentry - Introduction to Programming in R https://tess.elixir-europe.org/events/software-carpentry-introduction-to-programming-in-r 2017-08-08 09:30:00 UTC 2017-08-08 16:30:00 UTC Intersect Australia HS3 401, La Trobe University - Bundoora , Melbourne, Australia HS3 401, La Trobe University - Bundoora Melbourne Australia Bioinformatics La Trobe University [] [] workshops_and_courses [] R-programming
  • Using Databases and SQL

    25 August 2017

    Melbourne, Australia

    Using Databases and SQL https://tess.elixir-europe.org/events/using-databases-and-sql-1bf7416d-eff0-4f81-b51a-f613e41209eb 2017-08-25 09:30:00 UTC 2017-08-25 13:00:00 UTC Intersect Australia HS3 402, La Trobe University, Melbourne Campus, Plenty Road, Melbourne, Australia HS3 402, La Trobe University, Melbourne Campus, Plenty Road Melbourne Australia Bioinformatics La Trobe University [] [] workshops_and_courses [] Biological databases
  • The Nucleosome: From Atoms to Genomes

    30 August - 1 September 2017

    Heidelberg, Germany

    The Nucleosome: From Atoms to Genomes https://tess.elixir-europe.org/events/the-nucleosome-from-atoms-to-genomes The aim of this conference is to integrate and extend understanding of the links between nucleosome structural properties and the functional roles of chromatin. This will enable new insights into the relationship between atomic details and genome-wide behaviour at the heart of the highly conserved histone-based packaging of eukaryotic genomes. 2017-08-30 00:00:00 UTC 2017-09-01 00:00:00 UTC EMBL, Heidelberg, Germany EMBL Heidelberg Germany Bioinformatics [] [] [] meetings_and_conferences [] []
  • Sequences and genomic features in R

    4 September 2017

    Melbourne, Australia

    Sequences and genomic features in R https://tess.elixir-europe.org/events/sequences-and-genomic-features-in-r This course introduces Bioconductor, a comprehensive collection of R packages related to bioinformatics. We will demonstrate the Bioconductor way of doing things and how to work with biological data types, and equip you to confidently approach whichever specific Bioconductor packages you need. Pre-requisite To attend this class, you must have attended our introductory R course or be reasonably familiar with the R language. 2017-09-04 14:00:00 UTC 2017-09-04 16:00:00 UTC Monash Bioinformatics Platform Melbourne, Melbourne, Australia Melbourne Melbourne Australia Bioinformatics Monash University Dr Sonika Tyagi, bioinformatics.platform@monash.edu [] PhD studentsPost-docsBioinformaticiansResearchers workshops_and_courses registration_of_interest R-programmingbioinformaticsBioconductor
  • Excel Fu for Researchers

    5 September 2017

    Melbourne, Australia

    Excel Fu for Researchers https://tess.elixir-europe.org/events/excel-fu-for-researchers 2017-09-05 09:30:00 UTC 2017-09-05 16:30:00 UTC Intersect Australia HS3 402, La Trobe University, Bundoora, Melbourne, Australia HS3 402, La Trobe University, Bundoora Melbourne Australia Data management La Trobe University [] [] workshops_and_courses [] bionformatics
  • Benchmarking: Incentives and Best Practises across Scientific Disciplines - Abstracting from Established Evaluations

    12 September 2017

    Basel, Switzerland

    Benchmarking: Incentives and Best Practises across Scientific Disciplines - Abstracting from Established Evaluations https://tess.elixir-europe.org/events/benchmarking-incentives-and-best-practises-across-scientific-disciplines-abstracting-from-established-evaluations The ELIXIR EXCELERATE Framework focuses on key aspects of modern research by bringing together method and infrastructure developers as well as researchers who aim to provide the scientific community with novel scientific tools, and cutting edge research results at the same time. New developments are generally benchmarked during development, with a certain composition of data and methods to benchmark against. Internal benchmarks often suffer from an incompleteness concerning both the test data and competing methods. Independent and community-driven blind benchmarks are addressing these issues and have been shown to be crucial for objectively assessing scientific methods in various communities, including substantial commitment from industry.   CASP is the prime example of community-driven benchmarking activities, with bi-annual editions from 1994. Since then, many other communities have come together to design and run their own benchmarking activities e.g. CAFA and Quest for Orthologs. The main benefit of recurring independent assessments is the task composition, which is varied from what was initially used to develop the methods. Since the tasks evolve over time, new aspects become crucial to be evaluated, reflecting current developments in the community. By being able to compare various methods on the same data set at the same point in time, new methods can prove their superiority in a much more transparent way as past individual benchmarks inherently suffer from the temporal focus on the methods available at that particular time. This workshop integrates experiences from various community-driven benchmarking efforts, illustrating key common elements. More importantly, these examples illustrate how benchmarking activities bring together to their members and foster new interactions and developments. The program comprises two main parts: (1) speakers from diverse communities reporting on successful recurring benchmarking implementations and (2) plenary discussions to identify common approaches, resulting in refined guidelines for establishing community based benchmarking. Further information for this workshop and Call for Abstracts is available at: https://bc2.ch/2017/program/workshops/ws6/ 2017-09-12 09:00:00 UTC 2017-09-12 21:00:00 UTC University of Basel, Basel, Switzerland University of Basel Basel Switzerland [] [] [] workshops_and_courses [] []
  • ELIXIR HoNs meeting

    13 September 2017

    Basel, Switzerland

    ELIXIR HoNs meeting https://tess.elixir-europe.org/events/elixir-hons-meeting ELIXIR Heads of Nodes will meet for a one day meeting to held alongside the [BC]2 conference in Basel on 13 September 2017. A full agenda and documents for the meeting will be made available to participants in due course.   2017-09-13 09:00:00 UTC 2017-09-13 00:00:00 UTC Basel, Switzerland Basel Switzerland [] [] [] meetings_and_conferences [] []
  • Whole Transcriptome Data Analysis

    3 - 6 October 2017

    Heidelberg, Germany

    Whole Transcriptome Data Analysis https://tess.elixir-europe.org/events/whole-transcriptome-data-analysis-e1246024-76e6-4430-aa04-b03a605ad7ca The course participants will use BioConductor software and Illumina BaseSpace Cloud apps. R-coding skills and deep knowledge of statistics are not necessary for attendance because most analyses will be performed with OneChannelGUI (a graphical interface to a series of BioConductor tools, which enables handling microarray data analysis as well as RNA-seq data without requiring programming skills). Computers for hands-on exercises will be provided along with demo data sets. Upon request, participants could bring along their own data to analyse. 2017-10-03 00:00:00 UTC 2017-10-06 00:00:00 UTC Heidelberg, Germany Heidelberg Germany Bioinformatics [] [] [] workshops_and_courses [] []
  • Best practices in programming 2017

    23 - 24 October 2017

    Basel

    Elixir node event
    Best practices in programming 2017 https://tess.elixir-europe.org/events/best-practices-in-programming-2017 This workshop is organised by the SIB PhD Training Network. Priority is given to its members, but is open to everyone. 2017-10-23 09:00:00 UTC 2017-10-24 00:00:00 UTC SIB, Basel SIB Basel [] training@sib.swiss [] [] workshops_and_courses [] []
  • Mammalian Genetics and Genomics

    24 - 27 October 2017

    Heidelberg, Germany

    Mammalian Genetics and Genomics https://tess.elixir-europe.org/events/mammalian-genetics-and-genomics The EMBL Conference Mammalian Genetics and Genomics: From Molecular Mechanisms to Translational Applications is a joint meeting of the International Mammalian Genome Society (IMGS) and the Mouse Molecular Genetics (MMG) meeting. This meeting will provide an international forum for the sharing of cutting-edge research in genetics and genomics that addresses fundamental areas of mammalian biology. The conference will include presentations by established and junior investigators, including trainees, and will include trainee mentoring events, workshops, and networking opportunities within a stimulating and welcoming environment. 2017-10-24 00:00:00 UTC 2017-10-27 00:00:00 UTC Heidelberg, Germany Heidelberg Germany Genomics [] [] [] meetings_and_conferences [] []
  • Cancer Genomics

    5 - 8 November 2017

    Heidelberg, Germany

    Cancer Genomics https://tess.elixir-europe.org/events/cancer-genomics-7664850b-6647-4f9d-a30b-4ec772e79fb2 This conference will provide an opportunity to learn about and keep up to date with the rapidly progressing area of cancer genomics. It will cover presentations from cancer genome projects, the areas of cancer functional genomics, systems biology, cancer mouse models and the translation and clinical impact of scientific results obtained. The meeting will bring together leading scientists from across these areas for a unique opportunity to interact and stimulate further integration of these efforts. 2017-11-05 00:00:00 UTC 2017-11-08 00:00:00 UTC EMBL, Heidelberg, Germany EMBL Heidelberg Germany Bioinformatics [] [] [] meetings_and_conferences [] []
  • Introduction to high-performance computing (sciCORE cluster)

    7 November 2017

    Basel

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2017-11-07 09:00:00 UTC 2017-11-07 00:00:00 UTC SIB, Basel SIB Basel [] training@sib.swiss [] [] workshops_and_courses [] []
  • EMBL-EBI Bioinformatics resources for exploring functional genomics data

    9 - 10 November 2017

    Heidelberg, Germany

    Elixir node event
    EMBL-EBI Bioinformatics resources for exploring functional genomics data https://tess.elixir-europe.org/events/embl-ebi-bioinformatics-resources-for-exploring-functional-genomics-data This course will provide participants with an introduction to functional genomics resources at EMBL-EBI, in particular to ArrayExpress (one of the ELIXIR core data resources) and Expression Atlas. 2017-11-09 09:30:00 UTC 2017-11-10 17:30:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Monika Kulka-Schuh [] [] [] [] HDRUK
  • High Performance Computing for genomic applications

    23 - 24 November 2017

    Basel

    Elixir node event
    High Performance Computing for genomic applications https://tess.elixir-europe.org/events/high-performance-computing-for-genomic-applications Overview The course "High Performance Computing for genomic applications" is organized for the D-BSSE researchers by Scientific IT Services on 23-24 November 2017. 2017-11-23 09:00:00 UTC 2017-11-24 00:00:00 UTC SIB, Basel SIB Basel [] training@sib.swiss [] [] workshops_and_courses [] []
  • Ensembl Browser Workshop, DKFZ, 28th November 2017

    28 November 2017

    Heidelberg, Germany

    Elixir node event
    Ensembl Browser Workshop, DKFZ, 28th November 2017 https://tess.elixir-europe.org/events/ensembl-browser-workshop-dkfz-28th-november-2017 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2017-11-28 09:00:00 UTC 2017-11-28 09:00:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Monika Kulka-Schuh [] [] [] [] HDRUK
  • Ensembl Browser workshop, DKFZ, 30th November 2017

    30 November 2017

    Heidelberg, Germany

    Elixir node event
    Ensembl Browser workshop, DKFZ, 30th November 2017 https://tess.elixir-europe.org/events/ensembl-browser-workshop-dkfz-30th-november-2017 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2017-11-30 09:00:00 UTC 2017-11-30 09:00:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Monika Kulka-Schuh [] [] [] [] HDRUK
  • Statistics for Life Scientists

    11 - 14 December 2017

    Basel

    Elixir node event
    Statistics for Life Scientists https://tess.elixir-europe.org/events/statistics-for-life-scientists Overview Statistics are an integral aspect of scientific research, particularly for the life sciences which rely heavily on quantitative methodologies. 2017-12-11 09:00:00 UTC 2017-12-14 00:00:00 UTC SIB, Basel SIB Basel [] training@sib.swiss [] [] workshops_and_courses [] []
  • Advanced Scientific Programming in Python

    14 - 21 January 2018

    Melbourne, Australia

    Advanced Scientific Programming in Python https://tess.elixir-europe.org/events/advanced-scientific-programming-in-python Applications are now open for this international school being held in the Southern Hemisphere for the first time. The Advanced Scientific Programming in Python (ASPP) summer school has had 10 extremely successful iterations in Europe (https://python.g-node.org/archives). Now, thanks to funding from the International Neuroinformatics Coordinating Facility (INCF), Melbourne is hosting the first ASPP workshop focussed on the Asia Pacific region. 2018-01-14 17:51:00 UTC 2018-01-21 17:51:00 UTC Juan Nunez-Iglesias, Melbourne Bioinformatics University of Melbourne, Melbourne, Australia University of Melbourne Melbourne Australia Imaging Neurobiology Informatics University of Melbourne aspp@melbournebioinformatics.org.au INCF Life Science Researcherspost-docsPhD studentsMaster studentsbioinformaticians workshops_and_courses [] Pythonneurosciencesbioinformatics
  • Ensembl Browser Workshop, Bogota, 11 February 2018

    11 February 2018

    Bogota, Colombia

    Elixir node event
    Ensembl Browser Workshop, Bogota, 11 February 2018 https://tess.elixir-europe.org/events/ensembl-browser-workshop-bogota-11-february-2018 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2018-02-11 09:00:00 UTC 2018-02-11 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] []
  • Introduction to high-performance computing (sciCORE cluster)

    14 February 2018

    Basel

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-9c1bba43-dc47-46fe-9cfe-f4b09461b0e5 Overview This full-day course (9am to 5pm) has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2018-02-14 09:00:00 UTC 2018-02-14 00:00:00 UTC SIB, Basel SIB Basel [] training@sib.swiss [] [] workshops_and_courses [] []
  • First Steps with R in Life Sciences

    12 - 13 March 2018

    Basel, Switzerland

    Elixir node event
    First Steps with R in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-696a4ac3-567e-4ab4-8e2f-9b69dd71c4a4 Overview R is a complete, flexible and open source system for statistical analysis and graphics, which has become a tool of choice for biologists and biomedical scientists who need to analyse and visualise large amounts of data. 2018-03-12 09:00:00 UTC 2018-03-13 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Intermediate R

    8 - 9 May 2018

    Basel, Switzerland

    Elixir node event
    Intermediate R https://tess.elixir-europe.org/events/intermediate-r-8f879c18-ef16-45ea-b4d9-6ccddade9c13 The course is full with a waiting list. Overview This 2-day intermediate course will move beyond simple scripts/recipes towards a more systematic understanding of R and its data structures. 2018-05-08 09:00:00 UTC 2018-05-09 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Inferring gene regulatory networks from high-throughput data with ISMARA

    23 May 2018

    Basel, Switzerland

    Elixir node event
    Inferring gene regulatory networks from high-throughput data with ISMARA https://tess.elixir-europe.org/events/inferring-gene-regulatory-networks-from-high-throughput-data-with-ismara This course is oversubscribed, but you can apply by clicking in the boutton below. Your name will then be place on the waiting list, and you will be contacted only if a there is a cancellation. 2018-05-23 09:00:00 UTC 2018-05-23 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps in Parallelization with OpenMP

    30 May 2018

    Basel, Switzerland

    Elixir node event
    First Steps in Parallelization with OpenMP https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp This course is currently full. Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. 2018-05-30 09:00:00 UTC 2018-05-30 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to high-performance computing (sciCORE cluster)

    6 June 2018

    Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-2b1ff111-035e-451e-9164-c7bad6762df4 Overview This full-day course (9-17h) has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2018-06-06 09:00:00 UTC 2018-06-06 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Graphical Models: From Mathematical Foundations to Biological Applications

    25 - 29 June 2018

    Basel, Switzerland

    Elixir node event
    Graphical Models: From Mathematical Foundations to Biological Applications https://tess.elixir-europe.org/events/graphical-models-from-mathematical-foundations-to-biological-applications 2018-06-25 09:00:00 UTC 2018-06-29 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Genome Assembly using Galaxy Australia (EMBL-ABR: Melbourne Bioinformatics Node)

    22 August 2018

    Melbourne, Australia

    Genome Assembly using Galaxy Australia (EMBL-ABR: Melbourne Bioinformatics Node) https://tess.elixir-europe.org/events/genome-assembly-using-galaxy-australia-embl-abr-melbourne-bioinformatics-node 2018-08-22 13:00:00 UTC 2018-08-22 16:00:00 UTC EMBL-ABR Melbourne Bioinformatics Boardroom, 187 Grattan St, Carlton, Melbourne, Australia Melbourne Bioinformatics Boardroom, 187 Grattan St, Carlton Melbourne Australia 3053 Bioinformatics Melbourne BioinformaticsUniversity of Melbourne [] [] [] [] bioinformaticsGalaxy
  • Introduction to Galaxy Australia - Genome Assembly (Monash Bioinformatics-Clayton)

    22 August 2018

    Melbourne, Australia

    Introduction to Galaxy Australia - Genome Assembly (Monash Bioinformatics-Clayton) https://tess.elixir-europe.org/events/intro-to-galaxy-australia-genome-assembly-monash-bioinformatics-clayton 2018-08-22 13:00:00 UTC 2018-08-22 16:00:00 UTC EMBL-ABR S322, Menzies 20 Chancellors Walk, Monash University, Clayton Campus, Melbourne, Australia S322, Menzies 20 Chancellors Walk, Monash University, Clayton Campus Melbourne Australia 3169 Bioinformatics Monash University [] [] [] [] bioinformaticsGalaxy
  • Introduction to Galaxy Australia - Genome Assembly (Monash Bioinformatics-Hudson)

    22 August 2018

    Melbourne, Australia

    Introduction to Galaxy Australia - Genome Assembly (Monash Bioinformatics-Hudson) https://tess.elixir-europe.org/events/intro-to-galaxy-australia-genome-assembly-monash-bioinformatics-hudson 2018-08-22 13:00:00 UTC 2018-08-22 14:00:00 UTC EMBL-ABR Level 4, Large Meeting Room, Translational Research Facility, Monash Health Translation Precinct, Clayton, Melbourne, Australia Level 4, Large Meeting Room, Translational Research Facility, Monash Health Translation Precinct, Clayton Melbourne Australia 3169 Bioinformatics Monash University [] [] [] [] bioinformaticsGalaxy
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