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4 events found

Scientific topics: Mass spectrometry  or Metagenomics 

and

City: Bogota  or Heidelberg  or tbd  or Basel  or Melbourne  or Washington  or Hinxton  or Oeiras 

  • AllBio course on data resources and tools for plant-omics

    18 - 22 February 2013

    Hinxton, United Kingdom

    AllBio course on data resources and tools for plant-omics https://tess.elixir-europe.org/events/allbio-course-on-data-resources-and-tools-for-plant-omics 2013-02-18 00:00:00 UTC 2013-02-22 00:00:00 UTC AllBio EMBL, Hinxton, United Kingdom EMBL Hinxton United Kingdom Proteomics Metagenomics Genomics Bioinformatics [] [] [] meetings_and_conferences [] []
  • Chromosome structure determination using modelling and Hi-C data

    25 - 28 November 2014

    Oeiras, Portugal

    Chromosome structure determination using modelling and Hi-C data https://tess.elixir-europe.org/events/chromosome-structure-determination-using-modelling-and-hi-c-data 2014-11-25 09:00:00 UTC 2014-11-28 00:00:00 UTC GTPB Oeiras, Portugal Oeiras Portugal Metagenomics Bioinformatics [] [] [] workshops_and_courses [] []
  • PDA17 Proteomics Data Analysis

    6 March 2017

    Oeiras, Portugal

    Elixir node event
    PDA17 Proteomics Data Analysis https://tess.elixir-europe.org/events/proteomics-data-analysis    IMPORTANT DATES for this Course   Deadline for applications: Feb 25th 2017 (New)   Course date: March 6th - March 10th 2017 Candidates with adequate profile will be accepted in the next 72 hours after the application until we reach 20 participants. Course description Mass spectrometry based proteomic experiments generate ever larger datasets and, as a consequence, complex data interpretation challenges. In this course, the concepts and methods required to tackle these challenges will be introduced, covering both protein identification and quantification. The core focus will be on shotgun proteomics data. Quantification through isobaric labels (iTRAQ, TMT) and label-free precursor peptide (MS1) ion intensities will also be introduced. The course will rely exclusively on free and user-friendly software, all of which can be directly applied in your lab upon your return from the course. An introduction to available online resources and repositories will also be given. Here you will see how to link the results from proteomic experiments with external data to conduct pathway, gene ontology and interaction analyses. In the course, you will also learn how to submit data to the ProteomeXchange online repositories, and how to browse and reprocess publicly available data from these repositories. The course will provide a solid basis for beginners, but also new perspectives to those already familiar with standard data interpretation procedures in proteomics. Note: this is a highly interactive course. It requires that the participants interact with each other and with the course instructors, in order to reach the learning outcomes in full. Course Pre-requisites The participants should have a basic knowledge about mass spectrometry based proteomics. Experience in analyzing proteomics data is an advantage, but not mandatory. The course does not require advanced computer skills. 2017-03-06 09:30:00 UTC 2017-03-06 09:30:00 UTC Pedro Fernandes Instituto Gulbenkian de Ciência, Oeiras, Portugal Instituto Gulbenkian de Ciência Oeiras Portugal 2781-901 Mass spectrometry Proteomics Instituto Gulbenkian de Ciência bicourses@igc.gulbenkian.pt [] [] 20 workshops_and_courses registration_of_interest []
  • Microbiome Visualization with Biome-Shiny

    31 January 2020

    Oeiras, Portugal

    Elixir node event
    Microbiome Visualization with Biome-Shiny https://tess.elixir-europe.org/events/microbiome-visualization-with-biome-shiny BioData.pt Crash Course: Microbiome Visualization with Biome-Shiny is an introductory one-day workshop seeking to provide users with the knowledge to create, analyze and visualize microbiome data. The course consists of two parts: the first part, is an introduction to, and hands-on demonstration of, the DADA2 pipeline, which will be used to process a training dataset into a file that can be analyzed through the Biome-Shiny tool; the second part, employs the Biome-Shiny GUI to explore the obtained dataset's microbial community composition, as well as the alpha- and beta-diversity of the dataset, and download their results for later use. By the end of this course, participants should be able to apply the DADA2 algorithm to process their own sequenced reads, as well as employ Biome-Shiny as a GUI-based solution to explore their data and produce a final report. 2020-01-31 09:30:00 UTC 2020-01-31 17:30:00 UTC BioData.pt / Instituto Gulbenkian de Ciência Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande, Oeiras, Portugal Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande Oeiras Portugal Metagenomics Instituto Gulbenkian de Ciência, Biodata.pt - Elixir's portuguese node of the european projec info@biodata.pt [] PhD students and post-docs who want to learn the basics of microbiome analysis in Bioinformatics, and have little knowledge of programming. workshops_and_courses first_come_first_served []

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