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4 events found

City: Bogota  or Heidelberg  or Leuven  or Fribourg  or New Mexico  or Singapore  or Queensland  or Leiden 

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Target audience: Graduate students  or Post-Docs 

  • Introduction to Next Generation Sequencing Bioinformatics Workshop

    31 March 2017

    Leuven, Belgium

    Elixir node event
    Introduction to Next Generation Sequencing Bioinformatics Workshop https://tess.elixir-europe.org/events/introduction-to-next-generation-sequencing-bioinformatics-workshop Introduction to Next Generation Sequencing Bioinformatics Workshop MARCH31, 2017 (08:30-17:00) Lokaal H04.212, ON2, Campus Gasthuisberg, KU Leuven, Leuven Preliminary Program 08:30 – 9:00 - Welcome coffee 09:00 – 09:05 – Welcome by Prof. Joris Vermeesch 09:05 - 10:00 - Overview of NGS sequencing methods and technologies Session lead: Jeroen Van Houdt - Genomics Core Leuven 10:00 - 11:00 – Understanding NGS raw data: Fastq format, quality checking, trimming, adapter clipping Session lead: Koen Herten - Genomics Core Leuven 11:00 – 11:30 – Coffee break 11:30 – 12:30 – Read mapping and alignment: SAM format, alignment tools, visualization on IGV Session lead: Koen Herten - Genomics Core Leuven 12:30 – 13:30 – Lunch 13:30 – 15:00 – Variant calling: tools, GATK, quality scores, baserecalibration, VCF files Session lead: Erika Souche & Luc Dehaspe - Genomics Core Leuven 15:00 – 15:30 – Coffee break 15:30 – 17:00 – RNA-Seq data: Differential expression principles, counting, DE table interpretation Session lead: Alvaro Cortés Calabuig – Genomics Core Leuven Places are limited and are assigned on a first-come first-serve policy. The workshop is free of charge for students and members of academic institutions in Belgium. The cost for members of non-academic institutions (VIB, IMEC, pharma, etc.) is 100€. Sandwiches will be offered at lunch time. Late cancellations are subject to an administrative fee of 50€. Participants are required to bring their own laptops. For inquiries, please send an email to alvaro.cortes@uzleuven.be. 2017-03-31 08:30:00 UTC 2017-03-31 17:00:00 UTC Genomics Core KU Leuven/UZ Leuven Herestraat 49, Rooml H04.212, ON2, Campus Gasthuisberg, KU Leuven, Leuven, Leuven, Belgium Herestraat 49, Rooml H04.212, ON2, Campus Gasthuisberg, KU Leuven, Leuven Leuven Vlaams-Brabant Belgium 3000 High-throughput sequencing KU Leuven alvaro.cortes@uzleuven.be [] Post-DocsPhD 25 workshops_and_courses first_come_first_served []
  • Live Long-Read sequencing and data analysis

    15 - 17 May 2019

    Fribourg, Switzerland

    Elixir node event
    Live Long-Read sequencing and data analysis https://tess.elixir-europe.org/events/live-long-read-sequencing-and-analysis More information here 2019-05-15 09:00:00 UTC 2019-05-17 00:00:00 UTC SIB, Fribourg, Switzerland SIB Fribourg Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • SIB PhD Training Network Annual Retreat

    24 - 26 June 2019

    Fribourg, Switzerland

    Elixir node event
    SIB PhD Training Network Annual Retreat https://tess.elixir-europe.org/events/sib-phd-training-network-annual-retreat-09268123-5621-4f87-b0bd-7ed24ab7783e This course is exclusively reserved to the members of the SIB PhD Training Network. 2019-06-24 09:00:00 UTC 2019-06-26 00:00:00 UTC SIB, Fribourg, Switzerland SIB Fribourg Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Data Management Plan

    8 September 2020

    Fribourg, Switzerland

    Elixir node event
    Data Management Plan https://tess.elixir-europe.org/events/data-management-plan-7e11cf6a-ff36-483c-b782-53d61d67da4d This course will take place in Fribourg with rules complying to COVID situation (distances and hygiene), but in the event of new restrictions, the participants will be informed that it will not be cancelled, but streamed. 2020-09-08 09:00:00 UTC 2020-09-08 00:00:00 UTC SIB, Fribourg, Switzerland SIB Fribourg Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []

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