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  • Introduction to Next Generation Sequencing Bioinformatics Workshop

    31 March 2017

    Leuven, Belgium

    Elixir node event
    Introduction to Next Generation Sequencing Bioinformatics Workshop https://tess.elixir-europe.org/events/introduction-to-next-generation-sequencing-bioinformatics-workshop Introduction to Next Generation Sequencing Bioinformatics Workshop MARCH31, 2017 (08:30-17:00) Lokaal H04.212, ON2, Campus Gasthuisberg, KU Leuven, Leuven Preliminary Program 08:30 – 9:00 - Welcome coffee 09:00 – 09:05 – Welcome by Prof. Joris Vermeesch 09:05 - 10:00 - Overview of NGS sequencing methods and technologies Session lead: Jeroen Van Houdt - Genomics Core Leuven 10:00 - 11:00 – Understanding NGS raw data: Fastq format, quality checking, trimming, adapter clipping Session lead: Koen Herten - Genomics Core Leuven 11:00 – 11:30 – Coffee break 11:30 – 12:30 – Read mapping and alignment: SAM format, alignment tools, visualization on IGV Session lead: Koen Herten - Genomics Core Leuven 12:30 – 13:30 – Lunch 13:30 – 15:00 – Variant calling: tools, GATK, quality scores, baserecalibration, VCF files Session lead: Erika Souche & Luc Dehaspe - Genomics Core Leuven 15:00 – 15:30 – Coffee break 15:30 – 17:00 – RNA-Seq data: Differential expression principles, counting, DE table interpretation Session lead: Alvaro Cortés Calabuig – Genomics Core Leuven Places are limited and are assigned on a first-come first-serve policy. The workshop is free of charge for students and members of academic institutions in Belgium. The cost for members of non-academic institutions (VIB, IMEC, pharma, etc.) is 100€. Sandwiches will be offered at lunch time. Late cancellations are subject to an administrative fee of 50€. Participants are required to bring their own laptops. For inquiries, please send an email to alvaro.cortes@uzleuven.be. 2017-03-31 08:30:00 UTC 2017-03-31 17:00:00 UTC Genomics Core KU Leuven/UZ Leuven Herestraat 49, Rooml H04.212, ON2, Campus Gasthuisberg, KU Leuven, Leuven, Leuven, Belgium Herestraat 49, Rooml H04.212, ON2, Campus Gasthuisberg, KU Leuven, Leuven Leuven Vlaams-Brabant Belgium 3000 High-throughput sequencing KU Leuven alvaro.cortes@uzleuven.be [] Post-DocsPhD 25 workshops_and_courses first_come_first_served []
  • Cool Tools for Science

    29 May 2019

    Lisbon, Portugal

    Elixir node event
    Cool Tools for Science https://tess.elixir-europe.org/events/cool-tools-for-science Dear Researcher in Life Sciences, Have you created a customized solution for your research? A software? A gadget? A life-changing protocol? Your creation might be useful for someone else! Come and share it at the first "Cool Tools for Science" meeting, a great chance to show and exchange a new dimension of your work: user innovation. Tell us about your inventions and how they improved your research performance, exhibit them to your colleagues and see what they have come up with too. Try to win the prize for the best innovation! 2019-05-29 09:00:00 UTC 2019-05-29 17:00:00 UTC Biodata.pt; Congento; RNEM - Portuguese Mass Spectrometry Network Champalimaud Foundation, Avenida Brasília, Lisbon, Portugal Champalimaud Foundation, Avenida Brasília Lisbon Portugal 1400-038 Biodata.pt - Elixir's portuguese node of the european projecCongentoRNEM - Portuguese Mass Spectrometry NetworkFChampalimaud - Fundação ChampalimaudFCUL - Faculdade de Ciências da Universidade de LisboaGenome.pt IGC - Instituto Gulbenkian de CiênciaIMM - Instituto de Medicina Molecular João Lobo Antunes INESC-ID - Instituto de Engenharia de Sistemas e Computadores, Investigação e DesenvolvimentoITQB NOVA - Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de LisboaPPBI - Portuguese Platform of BioImaging PTNMR - Portuguese Nuclear Magnetic Resonance Network info@biodata.pt [] Researchers in Life Sciences awards_and_prizegivings registration_of_interest Gadgets, software
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