6 events found
SYSBIO 2020 – Advanced Lecture Course on Systems Biology
7 - 13 March 2020
Hotel Grauer Bär, AustriaSYSBIO 2020 – Advanced Lecture Course on Systems Biology https://www.dtls.nl/?post_type=course&p=17510 https://tess.elixir-europe.org/events/sysbio-2020-advanced-lecture-course-on-systems-biology Systems Biology is one of the most prominent newly emerging interdisciplinary science areas. By connecting fields such as genomics, proteomics, cell biology, medicine, molecular biology, biochemistry and genetics, with mathematics, bioinformatics, engineering and computation, it enables discovery of yet unknown… The post SYSBIO 2020 – Advanced Lecture Course on Systems Biology appeared first on Dutch Techcentre for Life Sciences. 2020-03-07 09:00:00 UTC 2020-03-13 00:00:00 UTC Hotel Grauer Bär, Innsbruck, Austria, Hotel Grauer Bär, Austria Hotel Grauer Bär, Innsbruck, Austria Hotel Grauer Bär Austria    workshops_and_courses  
CABANA Workshop: Analysis of Crop Genomics Data
16 - 20 March 2020
Bogota, ColombiaCABANA Workshop: Analysis of Crop Genomics Data http://www.ebi.ac.uk/training/events/2020/cabana-workshop-analysis-crop-genomics-data https://tess.elixir-europe.org/events/cabana-workshop-analysis-of-crop-genomics-data-0d1c7271-613b-4672-bac5-19f641f9be70 This course will introduce crop biologists to methods and approaches for analysing crop genomics data. 2020-03-16 08:30:00 UTC 2020-03-20 12:30:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711  Marco Cristancho     HDRUK
Introduction to Regular Expressions
18 March 2020
Heidelberg, GermanyIntroduction to Regular Expressions https://www.denbi.de/training/774-introduction-to-regular-expressions https://tess.elixir-europe.org/events/introduction-to-regular-expressions Educators: Supriya Khedkar, Toby Hodges (HD-HuB) Date: 18/03/2020 09:30 - 16:00 Location: EMBL Heidelberg; Room 202 Contents: Do you often work with lots of data files on the computer, are you often trying to spot particular files or lines of text in them that are important for you? If so, then using regular expressions could save you a lot of time and frustration! Regular expressions (regex/REs) are a language designed to describe patterns of characters that you want to match in a body of text. For example, if you want to extract every Ensembl Gene ID in a GFF file, find tandem repeats in a large set of sequences, or extract every email address in a large document, regular expressions are the perfect tool. Regular expressions are incorporated into a wide range of software and programming languages, and the workshop will include examples of their use on the UNIX command line and in R and Python. Learning goals: This workshop will provide an introduction to REs and cover some of the simple but powerful ways that these can be used to find patterns in large volumes of text data. The workshop will be interactive and driven by examples to demonstrate how you might use regular expressions in your work. Prerequisites: Participants are required to bring their own laptop to the workshop, with a text editor suitable for programming (e.g. Atom, Sublime Text, VSCode, Notepad++) installed. Keywords: UNIX command line, R, Python Tools: UNIX command line, R, Python 2020-03-18 09:00:00 UTC 2020-03-18 17:00:00 UTC de.NBI Heidelberg, Heidelberg, Germany Heidelberg Heidelberg Karlsruhe Germany    workshops_and_courses  
Ensembl Browser Workshop, DKFZ, 5 May 2020
5 May 2020
Heidelberg, GermanyEnsembl Browser Workshop, DKFZ, 5 May 2020 http://www.ebi.ac.uk/training/events/2020/ensembl-browser-workshop-dkfz-5-may-2020 https://tess.elixir-europe.org/events/ensembl-browser-workshop-dkfz-5-may-2020 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2020-05-05 09:00:00 UTC 2020-05-05 09:00:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120  Astrid Gall     HDRUK
Ensembl REST API Workshop, DKFZ, 6 May 2020
6 May 2020
Heidelberg, GermanyEnsembl REST API Workshop, DKFZ, 6 May 2020 http://www.ebi.ac.uk/training/events/2020/ensembl-rest-api-workshop-dkfz-6-may-2020 https://tess.elixir-europe.org/events/ensembl-rest-api-workshop-dkfz-6-may-2020 Work with Ensembl to master the Ensembl REST API and flexibly access genome-wide data, such as genes, variants, regulatory features, homologues and alignments. 2020-05-06 09:00:00 UTC 2020-05-06 09:00:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120  Astrid Gall     HDRUK
EMBO practical course on Integrative Modelling of Biomolecular Interactions
11 - 15 May 2020
Izmir, TurkeyEMBO practical course on Integrative Modelling of Biomolecular Interactions http://meetings.embo.org/event/20-biomolecular-interactions https://tess.elixir-europe.org/events/embo-practical-course-on-integrative-modelling-of-biomolecular-interactions Proteins and their interactions are the mainstays of any cellular process. Studying these interactions at atomic detail is invaluable, paving the route to a mechanistic understanding of biological function and providing the first essential step towards the development of new drugs. Because of the costs and challenges associated with experimental techniques, structural biologists often turn to computational methods. This course will present docking-based computational methods and related bioinformatics approaches, aiming at predicting how proteins interact with other biomolecules or ligands. Lectures will provide the theoretical background on state-of-the-art algorithms for sampling and scoring docking models, describe the use of low- and high-resolution information, and conservation- and coevolution-based interface prediction methods. Further, to broaden the scope of the course beyond protein-protein interactions, we will cover protein-peptide docking, data-driven molecular simulations, and other relevant topics in the field, including modeling of large assemblies and membrane proteins. Roughly half of the course wil consist of practical sessions where the students will run computations on interesting biological problems. Finally, to encourage interaction between all participants and stimulate discussions, students will be prompted to present their own research, both in flash presentations and poster sessions, and bring their own research problems to dedicated troubleshooting sessions. 2020-05-11 09:00:00 UTC 2020-05-15 18:00:00 UTC Alexandre Bonvin, Ezgi Karaca and João Rodrigues Izmir Biomedicine and Genome Center Dokuz Eylül University Health Campus Mithatpasa St. 58/5 35340 Balcova, Izmir/TURKEY, Izmir, Turkey Izmir Biomedicine and Genome Center Dokuz Eylül University Health Campus Mithatpasa St. 58/5 35340 Balcova, Izmir/TURKEY Izmir Balçova Turkey 35340  firstname.lastname@example.org BrukerF1000 ResearchBioExcelEMBO Press  24 workshops_and_courses  Protein-Protein Complex modelingmodellingDockingInteractions
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