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  • Metagenomic Bioinformatics Analysis

    18 - 19 February 2020

    Heidelberg, Germany

    Metagenomic Bioinformatics Analysis https://tess.elixir-europe.org/events/metagenomic-bioinformatics-analysis Educators: Laura Carroll, Nicolai Karcher, Alessio Milanese, Jakob Wirbel, Georg Zeller (HD-HuB) Date: 18/02/2020 - 19/02/2020 09:00 - 17:00 Location: ATC Computer Training Lab, European Molecular Biology Laboratory (EMBL) Contents: Shotgun metagenomic sequencing approaches are being increasingly employed to characterize the human microbiome. Such complex metagenomics data sets are a rich source for generating functional hypotheses about the roles that gut microbiota play in human health and disease. In this bioinformatics course, participants will be exposed to computational and statistical approaches for the analysis of shotgun metagenomic data. Through a combination of theory-centric lectures and hands-on, practical exercises, the course will cover topics such as taxonomic profiling (i.e., determining “who’s there” in a microbial community), functional analysis (i.e., broadly assessing the functional and metabolic potential of a microbial community, and also mining for specific gene families such as toxins), and comparative metagenomics (i.e., identifying taxa or microbial functions associated with a disease of interest). Learning goals: - Pre-processing and quality control of Illumina metagenomic data - Taxonomic profiling - Exploratory analyses and visualization methods for metagenomic data - Functional metagenomic profiling (using both general purpose databases and targeted approaches) - Comparative analysis of metagenomic data Prerequisites: - Familiarity with the Linux command line interface (e.g., running programs from the command line, creating and moving between directories, accessing a remote host via SSH) - Basic knowledge of the R programming language (e.g., loading data into R, manipulating data frames, creating basic plots) Keywords: Metagenomics 2020-02-18 09:00:00 UTC 2020-02-19 17:00:00 UTC de.NBI Heidelberg, Heidelberg, Germany Heidelberg Heidelberg Karlsruhe Germany [] [] [] workshops_and_courses [] []
  • Mining PDBe and PDBe-KB Using a Graph Database

    18 - 20 February 2020

    Cambridge, United Kingdom

    Elixir node event
    Mining PDBe and PDBe-KB Using a Graph Database https://tess.elixir-europe.org/events/mining-pdbe-and-pdbe-kb-using-a-graph-database This workshop covers the use of the PDBe graph database to extract data for solving complex structural biology queries. 2020-02-18 12:00:00 UTC 2020-02-20 14:00:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 1, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 1 Cambridge United Kingdom CB10 1SD [] Meredith Willmott [] [] [] [] HDRUK
  • An Introduction to Machine Learning

    19 - 21 February 2020

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Machine Learning https://tess.elixir-europe.org/events/an-introduction-to-machine-learning-4a589171-221a-4bc7-b5f7-f0172c7ab980 Machine learning gives computers the ability to learn without being explicitly programmed. It encompasses a broad range of approaches to data analysis with applicability across the biological sciences. Lectures will introduce commonly used algorithms and provide insight into their theoretical underpinnings. In the practicals students will apply these algorithms to real biological data-sets using the R language and environment. Please be aware that the course syllabus is currently being updated following feedback from the last event; therefore the agenda below will be subjected to changes. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3241183&course-title=An%20Introduction%20to%20Machine%20Learning).'' 2020-02-19 09:30:00 UTC 2020-02-21 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Machine learning Data mining Bioinformatics University of Cambridge Bioinformatics Training [] This is aimed at life scientists with little or no experience in machine learning and that are looking at implementing these approaches in their research.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Statistics bootcamp using R

    25 - 28 February 2020

    Cambridge, United Kingdom

    Elixir node event
    Statistics bootcamp using R https://tess.elixir-europe.org/events/statistics-bootcamp-using-r This 4-days bootcamp provides an in depth look at statistical analyses using R. Day 1 aims to introduce R as a tool for statistics and graphics, with the main aim being to become comfortable with the R environment. As well as introducing core R language concepts, this course also provides the basics of using the Tidyverse for data maniupulation, and ggplot for plotting. It will focus on entering and manipulating data in R and producing simple graphs. Day 2-4 will focus on the statistical possibilities of R, covering from experimental design to analysis of quantitative and qualitative data. Ample time will be given to participants to practice different type of analysis and interact with the trainers to discuss their statistical problems. This event is organized in collaboration with the [Babraham Institutes's Bioinformatics Group](https://www.bioinformatics.babraham.ac.uk/index.html) and it is supported by the BBSRC Strategic Training Awards for Research Skills (STARS) grant (BB/P022766/1). The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3246150&course-title=Statistics%20bootcamp%20using%20R).'' 2020-02-25 09:30:00 UTC 2020-02-28 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • First steps with Git for reproducible research

    27 February 2020

    Lausanne, Switzerland

    Elixir node event
    First steps with Git for reproducible research https://tess.elixir-europe.org/events/first-steps-with-git-for-reproducible-research-date-to-be-confirmed Overview The course is now full with a waiting list. However, you can still apply so that we keep your name in case of cancellations and/or if we organize other sessions later this year. Thank you for your understanding. 2020-02-27 09:00:00 UTC 2020-02-27 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to Multiomics Data Integration

    2 - 5 March 2020

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Multiomics Data Integration https://tess.elixir-europe.org/events/introduction-to-multiomics-data-integration-beba48af-1cd5-40f2-b174-16fd200be7d5 We are currently developing the course programme for 2020, and as further information about the course becomes available we will update this page. 2020-03-02 09:00:00 UTC 2020-03-05 17:00:00 UTC European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) Cambridge United Kingdom CB10 1SD [] EMBL-EBI Training Team [] [] [] [] HDRUK
  • Introduction to Multiomics Data Integration and Visualisation

    2 - 6 March 2020

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Multiomics Data Integration and Visualisation https://tess.elixir-europe.org/events/introduction-to-multiomics-data-integration-and-visualisation This introductory course will highlight the challenges that researchers face in integrating multiomics data sets using biological examples. 2020-03-02 09:00:00 UTC 2020-03-06 13:30:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 1, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 1 Cambridge United Kingdom CB10 1SD [] Meredith Willmott [] [] [] [] HDRUK
  • Protein sequence databases and sequence annotation

    3 March 2020

    Lausanne, Switzerland

    Elixir node event
    Protein sequence databases and sequence annotation https://tess.elixir-europe.org/events/protein-sequence-databases-and-sequence-annotation-9c461b78-1753-471b-9ce6-5609ad05f550 Overview Using high-throughput technologies, you can identify long lists of candidate genes that differ between two experimental conditions. 2020-03-03 09:00:00 UTC 2020-03-03 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Enrichment Analysis - CANCELLED

    5 March 2020

    Lausanne, Switzerland

    Elixir node event
    Enrichment Analysis - CANCELLED https://tess.elixir-europe.org/events/enrichment-analysis-7d93b0c3-8f3b-474c-b601-c2c49248f1b5 Overview Several statistical methods are available to determine whether a set of genes shows statistically significant differences between two classes (two biological states, two phenotype states, two experimental conditions, etc). 2020-03-05 09:00:00 UTC 2020-03-05 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Advanced Technical Presentation 1: Core Techniques

    9 March 2020

    Lausanne, Switzerland

    Elixir node event
    Advanced Technical Presentation 1: Core Techniques https://tess.elixir-europe.org/events/advanced-technical-presentation-1-core-techniques-0ce3fba8-5124-48aa-91a7-1ca0e393ab56 Overview Presenting technical information to an audience is one of the hardest tasks any scientist can face — in particular because presenting effectively is not a natural talent for most people. 2020-03-09 09:00:00 UTC 2020-03-09 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Bioinformatics Resources for Protein Biology

    10 - 12 March 2020

    Cambridge, United Kingdom

    Elixir node event
    Bioinformatics Resources for Protein Biology https://tess.elixir-europe.org/events/bioinformatics-resources-for-protein-biology-71c4f4fc-5ec0-4ea8-9e3a-4e67268eeb86 This three day workshop will introduce you to data resources and tools developed by EMBL-EBI that can help you in your protein studies. Each day will focus on a particular protein topic, with the aim of helping you get more from your data and also to explore publically-available data that can further support your research. 2020-03-10 09:00:00 UTC 2020-03-12 17:30:00 UTC European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) Cambridge United Kingdom CB10 1SD [] Charlotte Pearton [] [] [] [] HDRUK
  • Advanced Technical Presentation 2: Design and Delivery Skills

    10 March 2020

    Lausanne, Switzerland

    Elixir node event
    Advanced Technical Presentation 2: Design and Delivery Skills https://tess.elixir-europe.org/events/advanced-technical-presentation-2-design-and-delivery-skills-74bb77e2-c81c-4e39-bc4d-7322411c7fef Overview The Advanced Technical Presentation: Core Techniques class taught at SIB on Monday 9 March 2020 covers the fundamentals of giving great presentations. 2020-03-10 09:00:00 UTC 2020-03-10 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Using CellProfiler and CellProfiler Analyst to analyse biological images

    10 - 11 March 2020

    Cambridge, United Kingdom

    Elixir node event
    Using CellProfiler and CellProfiler Analyst to analyse biological images https://tess.elixir-europe.org/events/using-cellprofiler-and-cellprofiler-analyst-to-analyse-biological-images-c53c332e-80c1-47bc-9317-2dddbca08941 Microscopy experiments have proven to be a powerful means of generating information-rich data for biological applications. From small-scale microscopy experiments to time-lapse movies and high-throughput screens, automatic image analysis is more objective and quantitative and less tedious than visual inspection. This course will introduce users to the free open-source image analysis program [CellProfiler](http://cellprofiler.org/) and its companion data exploration program CellProfiler Analyst. We will show how CellProfiler can be used to analyse a variety of types of imaging experiments. We will also briefly discuss the basic principles of supervised machine learning with CellProfiler Analyst in order to score complex and subtle phenotypes. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3246450&course-title=Using%20CellProfiler%20and%20CellProfiler%20Analyst%20to%20analyse%20biological%20images).'' 2020-03-10 09:30:00 UTC 2020-03-11 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Data visualisation Data mining Biological imaging Bioinformatics University of Cambridge Bioinformatics Training [] Researchers who want to extract quantitative information from microscopy imagesGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Advanced Technical Presentation 3: Persuasive Speaking

    11 March 2020

    Lausanne, Switzerland

    Elixir node event
    Advanced Technical Presentation 3: Persuasive Speaking https://tess.elixir-europe.org/events/advanced-technical-presentation-3-persuasive-speaking-131f2242-147a-439a-934f-9a551a178811 Overview You have 10 minutes to speak. You have 5 people listening to you. You have 1 chance to sell them your idea. And you're probably going to blow it. Not because your idea isn't innovative. Not because your plan isn't well thought out. 2020-03-11 09:00:00 UTC 2020-03-11 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • API Design for Programmers

    12 March 2020

    Lausanne, Switzerland

    Elixir node event
    API Design for Programmers https://tess.elixir-europe.org/events/api-design-for-programmers Overview Good API design is essential to good software development because, from the point-of-view of the users of your modules, the API is the software. 2020-03-12 09:00:00 UTC 2020-03-12 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • On the Shoulders of Giants: 400 Years of Raku

    12 March 2020

    Lausanne, Switzerland

    Elixir node event
    On the Shoulders of Giants: 400 Years of Raku https://tess.elixir-europe.org/events/on-the-shoulders-of-giants-400-years-of-raku Overview Raku is a new and astonishingly powerful dynamic multiparadigm programming language. Though it was only officially released in 2015, it has actually been in development for well over four centuries. 2020-03-12 09:00:00 UTC 2020-03-12 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • An Introduction to Solving Biological Problems with Python

    12 - 13 March 2020

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with Python https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-python-a1765edb-7609-4699-a93e-9149f1f7ff2c This course provides a practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs and customize more complex code to fit their needs. Course materials are available [here](http://pycam.github.io). Please note that the content of this course has recently been updated. This course now mostly focuses on core concepts including Python syntax, data structures and reading/writing files. Concepts and strategies for working more effectively with Python are now the focus of a new 2-days course, [Data Science in Python](http://training.csx.cam.ac.uk/bioinformatics/course/bioinfo-dspyt/). The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3166591&course-title=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20Python).'' 2020-03-12 09:30:00 UTC 2020-03-13 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Biology Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Better coding practices

    13 March 2020

    Lausanne, Switzerland

    Elixir node event
    Better coding practices https://tess.elixir-europe.org/events/better-coding-practices-bef56731-96e9-4fa5-a995-2ac848215638 Overview One of the major challenges in any modern development environment is "code rot". 2020-03-13 09:00:00 UTC 2020-03-13 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • CABANA Workshop: Analysis of Crop Genomics Data

    16 - 20 March 2020

    Bogota, Colombia

    Elixir node event
    CABANA Workshop: Analysis of Crop Genomics Data https://tess.elixir-europe.org/events/cabana-workshop-analysis-of-crop-genomics-data-0d1c7271-613b-4672-bac5-19f641f9be70 This course will introduce crop biologists to methods and approaches for analysing crop genomics data. 2020-03-16 08:30:00 UTC 2020-03-20 12:30:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Marco Cristancho [] [] [] [] HDRUK
  • Data Visualisation for Biology: A Practical Workshop on Design, Techniques and Tools

    16 - 20 March 2020

    Cambridge, United Kingdom

    Elixir node event
    Data Visualisation for Biology: A Practical Workshop on Design, Techniques and Tools https://tess.elixir-europe.org/events/data-visualisation-for-biology-a-practical-workshop-on-design-techniques-and-tools-e75d7444-88a1-42c8-b062-a65c8816e3bc This course will give insights into, and practical experience in data visualisation for exploring biological data. 2020-03-16 09:00:00 UTC 2020-03-20 17:00:00 UTC European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) Cambridge United Kingdom CB10 1SD [] Michelle Mendonca [] [] [] [] HDRUK
  • Introduction to Regular Expressions

    18 March 2020

    Heidelberg, Germany

    Introduction to Regular Expressions https://tess.elixir-europe.org/events/introduction-to-regular-expressions Educators: Supriya Khedkar, Toby Hodges (HD-HuB) Date: 18/03/2020 09:30 - 16:00 Location: EMBL Heidelberg; Room 202 Contents: Do you often work with lots of data files on the computer, are you often trying to spot particular files or lines of text in them that are important for you? If so, then using regular expressions could save you a lot of time and frustration! Regular expressions (regex/REs) are a language designed to describe patterns of characters that you want to match in a body of text. For example, if you want to extract every Ensembl Gene ID in a GFF file, find tandem repeats in a large set of sequences, or extract every email address in a large document, regular expressions are the perfect tool. Regular expressions are incorporated into a wide range of software and programming languages, and the workshop will include examples of their use on the UNIX command line and in R and Python. Learning goals: This workshop will provide an introduction to REs and cover some of the simple but powerful ways that these can be used to find patterns in large volumes of text data. The workshop will be interactive and driven by examples to demonstrate how you might use regular expressions in your work. Prerequisites: Participants are required to bring their own laptop to the workshop, with a text editor suitable for programming (e.g. Atom, Sublime Text, VSCode, Notepad++) installed. Keywords: UNIX command line, R, Python Tools: UNIX command line, R, Python 2020-03-18 09:00:00 UTC 2020-03-18 17:00:00 UTC de.NBI Heidelberg, Heidelberg, Germany Heidelberg Heidelberg Karlsruhe Germany [] [] [] workshops_and_courses [] []
  • Introduction to R for Biologists

    23 - 24 March 2020

    Cambridge, United Kingdom

    Elixir node event
    Introduction to R for Biologists https://tess.elixir-europe.org/events/introduction-to-r-for-biologists-a06df643-7a60-4503-a1f7-c819402fb7a1 R is one of the leading programming languages in Data Science. It is widely used to perform statistics, machine learning, visualisations and data analyses. It is an open source programming language so all the software we will use in the course is free. This course is an introduction to R designed for participants with no programming experience. We will start from scratch by introducing how to start programming in R and progress our way and learn how to read and write to files, manipulate data and visualise it by creating different plots - all the fundamental tasks you need to get you started analysing your data. During the course we will be working with one of the most popular packages in R; tidyverse that will allow you to manipulate your data effectively and visualise it to a publication level standard. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3097843&course-title=Introduction%20to%20R%20for%20Biologists).'' 2020-03-23 09:30:00 UTC 2020-03-24 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Data Management Plan

    24 - 25 March 2020

    Lausanne, Switzerland

    Elixir node event
    Data Management Plan https://tess.elixir-europe.org/events/data-management-plan-8fceda8b-11e7-4107-a28b-92357be90aa0 Overview Recent studies have shown that worldwide, between 51% and 89% of published life sciences research is not reproducible, with consequent losses estimated at around $100 billions/year in biomedical research (Chalmers et al., 2009; Freedman et 2020-03-24 09:00:00 UTC 2020-03-25 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Analysis of bulk RNA-seq data

    25 - 27 March 2020

    Cambridge, United Kingdom

    Elixir node event
    Analysis of bulk RNA-seq data https://tess.elixir-europe.org/events/analysis-of-bulk-rna-seq-data-66d0a6e6-6641-406b-9df9-53937e6a1c5c The aim of this course is to familiarize the participants with the primary analysis of RNA-seq data. This course starts with a brief introduction to RNA-seq and discusses quality control issues. Next, we will present the alignment step, quantification of expression and differential expression analysis. For downstream analysis we will focus on tools available through the Bioconductor project for manipulating and analysing bulk RNA-seq. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3246123&course-title=Analysis%20of%20bulk%20RNA-seq%20data).'' 2020-03-25 09:30:00 UTC 2020-03-27 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR RNA-Seq Data mining Transcriptomics Data visualisation Functional genomics Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Training on the data integration platforms tranSMART & cBioPortal

    26 - 27 March 2020

    Amsterdam, Netherlands

    Elixir node event
    Training on the data integration platforms tranSMART & cBioPortal https://tess.elixir-europe.org/events/training-on-the-data-integration-platforms-transmart-cbioportal The data integration platforms tranSMART and cBioPortal are widely used by researchers and clinicians to integrate, analyse and visualise large amounts of data. In this CORBEL course, data stewards/data managers are offered the opportunity to learn how to upload data to these platforms and how to use the different user interfaces. They will gain insight into these platforms and the possibilities that they offer. 2020-03-26 08:30:00 UTC 2020-03-27 17:00:00 UTC Aristo Amsterdam, Amsterdam, Netherlands Aristo Amsterdam Amsterdam Netherlands 1043 EJ [] Michelle Mendonca [] [] [] [] HDRUK
  • CORBEL workshop: Training on the data integration platforms tranSMART & cBioPortal

    26 - 27 March 2020

    Amsterdam, Netherlands

    Elixir node event
    CORBEL workshop: Training on the data integration platforms tranSMART & cBioPortal https://tess.elixir-europe.org/events/corbel-workshop-training-on-the-data-integration-platforms-transmart-cbioportal The data integration platforms tranSMART and cBioPortal are widely used by researchers and clinicians to integrate, analyse and visualise large amounts of data. In this CORBEL course, data stewards/data managers are offered the opportunity to learn how to upload data to these platforms and how to use the different user interfaces. They will gain insight into these platforms and the possibilities that they offer. 2020-03-26 08:30:00 UTC 2020-03-27 17:00:00 UTC Aristo Amsterdam, Amsterdam, Netherlands Aristo Amsterdam Amsterdam Netherlands 1043 EJ [] Michelle Mendonca [] [] [] [] HDRUK
  • Best practices for storing genomic data: compression and encryption

    26 March 2020

    Cambridge, United Kingdom

    Best practices for storing genomic data: compression and encryption https://tess.elixir-europe.org/events/best-practices-for-storing-genomic-data-compression-and-encryption This is a collaborative workshop between ELIXIR Luxembourg and Petagene, organised within an ELIXIR Knowledge Exchange Scheme project. For more information please contact katharina.lauer@elixir-europe.org 2020-03-26 09:00:00 UTC 2020-03-26 09:00:00 UTC Cambridge, United Kingdom Cambridge United Kingdom [] [] [] [] [] []
  • ELIXIR Train the Trainer

    30 - 31 March 2020

    Cambridge, United Kingdom

    Elixir node event
    ELIXIR Train the Trainer https://tess.elixir-europe.org/events/elixir-train-the-trainer-f54326b0-a8c1-4661-aa07-341344b0ff55 This course aims to provide trainers with guidance and tips for developing and delivering training in bioinformatics, exploring a range of methods appropriate to different learning styles and examining the requirements for a successful course (both scientific and logistic). This event is organized as part of the Horizon 2020 ELIXIR-EXCELERATE project. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3357293&course-title=Train%20the%20trainer).'' 2020-03-30 08:30:00 UTC 2020-03-31 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to Metabolomics Analysis

    30 March - 2 April 2020

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Metabolomics Analysis https://tess.elixir-europe.org/events/introduction-to-metabolomics-analysis-95208499-863e-42de-9e3b-fc08328d6583 This course will provide an introduction to metabolomics data analysis. 2020-03-30 09:00:00 UTC 2020-04-02 17:00:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 1, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 1 Cambridge United Kingdom CB10 1SD [] Meredith Willmott [] [] [] [] HDRUK
  • Molecular Phylogenetics

    1 - 3 April 2020

    Cambridge, United Kingdom

    Elixir node event
    Molecular Phylogenetics https://tess.elixir-europe.org/events/molecular-phylogenetics-67b36582-1fd4-412e-bf20-fa3584ab1e2f This course will provide training for bench-based biologists to use molecular data to construct and interpret phylogenies, and test their hypotheses. Delegates will gain hands-on practice of using a variety of programs freely-available online and commonly used in molecular studies, interspersed with some lectures. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3350639&course-title=Molecular%20Phylogenetics).'' 2020-04-01 08:00:00 UTC 2020-04-03 16:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Phylogenetics Data visualisation Data mining Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
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