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231 events found

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  • Big Data in Biology and Health

    25 - 27 September 2016

    Heidelberg, Germany

    Big Data in Biology and Health https://tess.elixir-europe.org/events/big-data-in-biology-and-health 2016-09-25 01:00:00 UTC 2016-09-27 01:00:00 UTC EMBL Heidelberg, Germany Heidelberg Germany Bioinformatics [] [] [] meetings_and_conferences [] []
  • Whole Transcriptome Data Analysis

    4 - 7 October 2016

    Heidelberg, Germany

    Whole Transcriptome Data Analysis https://tess.elixir-europe.org/events/whole-transcriptome-data-analysis 2016-10-04 01:00:00 UTC 2016-10-07 01:00:00 UTC EMBL EMBL Heidelberg, Heidelberg, Germany EMBL Heidelberg Heidelberg Germany Transcriptomics [] [] [] workshops_and_courses [] ISCBOtherEvents
  • Complex Life of mRNA

    5 - 8 October 2016

    Heidelberg, Germany

    Complex Life of mRNA https://tess.elixir-europe.org/events/complex-life-of-mrna 2016-10-05 01:00:00 UTC 2016-10-08 01:00:00 UTC Heidelberg, Germany Heidelberg Germany Genomics Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • Organoids: Modelling Organ Development and Disease in 3D Culture

    12 - 15 October 2016

    Heidelberg, Germany

    Organoids: Modelling Organ Development and Disease in 3D Culture https://tess.elixir-europe.org/events/organoids-modelling-organ-development-and-disease-in-3d-culture 2016-10-12 01:00:00 UTC 2016-10-15 01:00:00 UTC Heidelberg, Germany Heidelberg Germany Bioinformatics [] [] [] meetings_and_conferences [] []
  • Experimental Approaches to Evolution and Ecology Using Yeast and Other Model Systems

    19 - 23 October 2016

    Heidelberg, Germany

    Experimental Approaches to Evolution and Ecology Using Yeast and Other Model Systems https://tess.elixir-europe.org/events/experimental-approaches-to-evolution-and-ecology-using-yeast-and-other-model-systems 2016-10-19 01:00:00 UTC 2016-10-23 01:00:00 UTC Heidelberg, Germany Heidelberg Germany Genomics Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • The Past in the Present - The Making of Memories

    3 - 4 November 2016

    Heidelberg, Germany

    The Past in the Present - The Making of Memories https://tess.elixir-europe.org/events/the-past-in-the-present-the-making-of-memories 2016-11-03 00:00:00 UTC 2016-11-04 00:00:00 UTC EMBL Heidelberg, Germany Heidelberg Germany Systems biology Bioinformatics [] [] [] meetings_and_conferences [] []
  • Microinjection into Adherent Cells

    9 - 10 November 2016

    Heidelberg, Germany

    Microinjection into Adherent Cells https://tess.elixir-europe.org/events/microinjection-into-adherent-cells-a5b4cbc5-fcfd-4483-a52a-0e72b1d42223 2016-11-09 00:00:00 UTC 2016-11-10 00:00:00 UTC EMBL Heidelberg, Germany Heidelberg Germany Genomics [] [] [] workshops_and_courses [] []
  • From Functional Genomics to Systems Biology

    12 - 15 November 2016

    Heidelberg, Germany

    From Functional Genomics to Systems Biology https://tess.elixir-europe.org/events/from-functional-genomics-to-systems-biology 2016-11-12 00:00:00 UTC 2016-11-15 00:00:00 UTC EMBL European Molecular Biology Laboratory, Heidelberg, Germany European Molecular Biology Laboratory Heidelberg Germany Systems biology Genomics Bioinformatics [] [] [] meetings_and_conferences [] SystemsBiologyOtherEventsISCB
  • Molecular Machines: Integrative Structural and Molecular Biology

    20 - 23 November 2016

    Heidelberg, Germany

    Molecular Machines: Integrative Structural and Molecular Biology https://tess.elixir-europe.org/events/molecular-machines-integrative-structural-and-molecular-biology The goal of this conference is to illustrate the state-of-the art of different approaches, to identify promising new advances in experimental methods for collecting and analysing the data and to discuss application of integrative and cutting edge methodology across scales. 2016-11-20 00:00:00 UTC 2016-11-23 00:00:00 UTC EMBL Heidelberg, Germany Heidelberg Germany Systems biology [] [] [] meetings_and_conferences [] []
  • Integrative Structural and Molecular Biology

    20 - 23 November 2016

    Heidelberg, Germany

    Integrative Structural and Molecular Biology https://tess.elixir-europe.org/events/integrative-structural-and-molecular-biology The goal of this conference is to illustrate the state-of-the art of different approaches, to identify promising new advances in experimental methods for collecting and analysing the data and to discuss application of integrative and cutting edge methodology across scales. 2016-11-20 00:00:00 UTC 2016-11-23 00:00:00 UTC Heidelberg, Germany Heidelberg Germany [] [] [] meetings_and_conferences [] []
  • The Nucleosome: From Atoms to Genomes

    30 August - 1 September 2017

    Heidelberg, Germany

    The Nucleosome: From Atoms to Genomes https://tess.elixir-europe.org/events/the-nucleosome-from-atoms-to-genomes The aim of this conference is to integrate and extend understanding of the links between nucleosome structural properties and the functional roles of chromatin. This will enable new insights into the relationship between atomic details and genome-wide behaviour at the heart of the highly conserved histone-based packaging of eukaryotic genomes. 2017-08-30 00:00:00 UTC 2017-09-01 00:00:00 UTC EMBL, Heidelberg, Germany EMBL Heidelberg Germany Bioinformatics [] [] [] meetings_and_conferences [] []
  • Whole Transcriptome Data Analysis

    3 - 6 October 2017

    Heidelberg, Germany

    Whole Transcriptome Data Analysis https://tess.elixir-europe.org/events/whole-transcriptome-data-analysis-e1246024-76e6-4430-aa04-b03a605ad7ca The course participants will use BioConductor software and Illumina BaseSpace Cloud apps. R-coding skills and deep knowledge of statistics are not necessary for attendance because most analyses will be performed with OneChannelGUI (a graphical interface to a series of BioConductor tools, which enables handling microarray data analysis as well as RNA-seq data without requiring programming skills). Computers for hands-on exercises will be provided along with demo data sets. Upon request, participants could bring along their own data to analyse. 2017-10-03 00:00:00 UTC 2017-10-06 00:00:00 UTC Heidelberg, Germany Heidelberg Germany Bioinformatics [] [] [] workshops_and_courses [] []
  • Mammalian Genetics and Genomics

    24 - 27 October 2017

    Heidelberg, Germany

    Mammalian Genetics and Genomics https://tess.elixir-europe.org/events/mammalian-genetics-and-genomics The EMBL Conference Mammalian Genetics and Genomics: From Molecular Mechanisms to Translational Applications is a joint meeting of the International Mammalian Genome Society (IMGS) and the Mouse Molecular Genetics (MMG) meeting. This meeting will provide an international forum for the sharing of cutting-edge research in genetics and genomics that addresses fundamental areas of mammalian biology. The conference will include presentations by established and junior investigators, including trainees, and will include trainee mentoring events, workshops, and networking opportunities within a stimulating and welcoming environment. 2017-10-24 00:00:00 UTC 2017-10-27 00:00:00 UTC Heidelberg, Germany Heidelberg Germany Genomics [] [] [] meetings_and_conferences [] []
  • Cancer Genomics

    5 - 8 November 2017

    Heidelberg, Germany

    Cancer Genomics https://tess.elixir-europe.org/events/cancer-genomics-7664850b-6647-4f9d-a30b-4ec772e79fb2 This conference will provide an opportunity to learn about and keep up to date with the rapidly progressing area of cancer genomics. It will cover presentations from cancer genome projects, the areas of cancer functional genomics, systems biology, cancer mouse models and the translation and clinical impact of scientific results obtained. The meeting will bring together leading scientists from across these areas for a unique opportunity to interact and stimulate further integration of these efforts. 2017-11-05 00:00:00 UTC 2017-11-08 00:00:00 UTC EMBL, Heidelberg, Germany EMBL Heidelberg Germany Bioinformatics [] [] [] meetings_and_conferences [] []
  • EMBL-EBI Bioinformatics resources for exploring functional genomics data

    9 - 10 November 2017

    Heidelberg, Germany

    Elixir node event
    EMBL-EBI Bioinformatics resources for exploring functional genomics data https://tess.elixir-europe.org/events/embl-ebi-bioinformatics-resources-for-exploring-functional-genomics-data This course will provide participants with an introduction to functional genomics resources at EMBL-EBI, in particular to ArrayExpress (one of the ELIXIR core data resources) and Expression Atlas. 2017-11-09 09:30:00 UTC 2017-11-10 17:30:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Monika Kulka-Schuh [] [] [] [] []
  • Ensembl Browser Workshop, DKFZ, 28th November 2017

    28 November 2017

    Heidelberg, Germany

    Elixir node event
    Ensembl Browser Workshop, DKFZ, 28th November 2017 https://tess.elixir-europe.org/events/ensembl-browser-workshop-dkfz-28th-november-2017 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2017-11-28 09:00:00 UTC 2017-11-28 09:00:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Monika Kulka-Schuh [] [] [] [] []
  • Ensembl Browser workshop, DKFZ, 30th November 2017

    30 November 2017

    Heidelberg, Germany

    Elixir node event
    Ensembl Browser workshop, DKFZ, 30th November 2017 https://tess.elixir-europe.org/events/ensembl-browser-workshop-dkfz-30th-november-2017 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2017-11-30 09:00:00 UTC 2017-11-30 09:00:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Monika Kulka-Schuh [] [] [] [] []
  • Data Manipulation and Visualisation using R

    15 December 2017

    Sheffield, United Kingdom

    Data Manipulation and Visualisation using R https://tess.elixir-europe.org/events/data-manipulation-and-visualisation-using-r It has been said that 80% of data analysis is spent on the process of cleaning and preparing the data. In this course we introduce some relatively-new additions to the R programming language; dplyr and ggplot2. In combination these provide a powerful toolkit to make the process of manipulating and visualising data easy and intuitive. 2017-12-15 09:30:00 UTC 2017-12-15 17:00:00 UTC Pam Liversidge Design Studio 2 - E06, Sheffield, United Kingdom Pam Liversidge Design Studio 2 - E06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Ensembl Browser Workshop, Bogota, 11 February 2018

    11 February 2018

    Bogota, Colombia

    Elixir node event
    Ensembl Browser Workshop, Bogota, 11 February 2018 https://tess.elixir-europe.org/events/ensembl-browser-workshop-bogota-11-february-2018 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2018-02-11 09:00:00 UTC 2018-02-11 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] []
  • Introduction to R

    26 March 2018

    Sheffield, United Kingdom

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-78ad016f-c086-4c38-95b9-7406d18597f3 R is a highly-regarded, free, software environment for statistical analysis, with many useful features that promote and facilitate reproducible research. In this course, we give an introduction to the R environment and explain how it can be used to import, manipulate and analyse tabular data. After the course you should feel confident to start exploring your own dataset using the materials and references provided. 2018-03-26 08:30:00 UTC 2018-03-26 16:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to RNA-seq

    27 March 2018

    Sheffield, United Kingdom

    Introduction to RNA-seq https://tess.elixir-europe.org/events/introduction-to-rna-seq High-throughput RNA-sequencing is now the standard technique for quantifying transcript abundance in a biological sample of interest. In this course we will describe the processes that take place once you submit a library for RNA sequencing, and what data you should expect to receive from the Bioinformatics Core. We will describe the steps involved to go from sequencing library to a list of genes that show statistically significant differences between your biological conditions of interest. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control and assessing differential expression. We will also showcase some web sites you can use for enrichment and pathways analysis. 2018-03-27 08:30:00 UTC 2018-03-27 16:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Best practices in Research Data Management for Biological Sciences

    30 April 2018

    Sheffield, United Kingdom

    Best practices in Research Data Management for Biological Sciences https://tess.elixir-europe.org/events/best-practices-in-research-data-management-for-biological-sciences As a researcher, you will encounter research data in many forms, ranging from measurements, numbers and images to documents and publications. Whether you create, receive or collect data, you will certainly need to organise it at some stage of your project. This workshop will provide an overview of some basic principles on how we can work with data more effectively. We will discuss the best practices for research data management and organisation so that our research is auditable and reproducible by ourselves, and others, in the future. 2018-04-30 12:00:00 UTC 2018-04-30 15:30:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to identifying and characterising variants from NGS data

    4 - 5 June 2018

    Sheffield, United Kingdom

    Introduction to identifying and characterising variants from NGS data https://tess.elixir-europe.org/events/introduction-to-identifying-and-characterising-variants-from-ngs-data This course covers state-of-the-art and best-practice tools for the analysis of genomes. We describe, and give hands-on experience of, the entire analysis workflow from raw data generated by a sequencing machine to deriving variant calls (e.g. Single Nucleotide Variants) that are ready for downstream analysis, interpretation and prioritisation. We will describe the steps involved to go from sequencing library to a prioritised, clinically-relevant list of DNA variants. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control, variant-calling and annotation. 2018-06-04 08:30:00 UTC 2018-06-05 16:00:00 UTC Pam Liversidge Design Studio 2 - E06, Sheffield, United Kingdom Pam Liversidge Design Studio 2 - E06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to RNA-seq analysis in R

    9 - 10 July 2018

    Sheffield, United Kingdom

    Introduction to RNA-seq analysis in R https://tess.elixir-europe.org/events/introduction-to-rna-seq-analysis-in-r In this workshop, you will be learning how to analyse RNA-seq count data, using R. This will include reading the data into R, quality control and performing differential expression analysis and gene set testing, with a focus on the edgeR analysis workflow. You will learn how to generate common plots for analysis and visualisation of gene expression data, such as boxplots and heatmaps. You will also be learning how alignment and counting of raw RNA-seq data can be performed in R. This workshop is aimed at biologists interested in learning how to perform differential expression analysis of RNA-seq data when reference genomes are available.. 2018-07-09 08:30:00 UTC 2018-07-10 16:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to R

    20 September 2018

    Sheffield, United Kingdom

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-0eafb926-c56e-48c8-8212-d96bf47ea7f4 R is a highly-regarded, free, software environment for statistical analysis, with many useful features that promote and facilitate reproducible research. In this course, we give an introduction to the R environment and explain how it can be used to import, manipulate and analyse tabular data. After the course you should feel confident to start exploring your own dataset using the materials and references provided. 2018-09-20 08:30:00 UTC 2018-09-20 16:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to Statistical Analysis

    24 October 2018

    Sheffield, United Kingdom

    Introduction to Statistical Analysis https://tess.elixir-europe.org/events/introduction-to-statistical-analysis-57925cde-fdc6-49b3-8b1b-a66ccea04dd6 This course provides a refresher on the foundations of statistical analysis. Practicals are conducted using the ‘Shiny’ package; which provides an accessible interface to the R statistical language. Note that this is not a course for learning about the R statistical language itself. If you wish to learn more about R, please see other courses at the Sheffield Bioinformatics Core. 2018-10-24 10:00:00 UTC 2018-10-24 16:00:00 UTC Pam Liversidge Design Studio 2 - E06, Sheffield, United Kingdom Pam Liversidge Design Studio 2 - E06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Machine Learning for Image Analysis

    29 - 31 October 2018

    Heidelberg, Germany

    Elixir node event
    Machine Learning for Image Analysis https://tess.elixir-europe.org/events/machine-learning-for-image-analysis This is a blended learning course on Machine Learning for Image Analysis, consisting of three online sessions with associated hands-on exercises prior to the workshop, a three day face-to-face workshop at EMBL Heidelberg and two optional online sessions with associated hands-on exercises after the workshop. The course is organised jointly by CORBEL, EMBL, German BioImaging and NEUBIAS. 2018-10-29 09:00:00 UTC 2018-10-31 16:15:00 UTC EMBL, Heidelberg, Germany EMBL Heidelberg Germany 69117 [] Charlotte Pearton [] [] [] [] []
  • Introduction to Genomic Variant Interpretation

    6 - 7 November 2018

    Sheffield, United Kingdom

    Introduction to Genomic Variant Interpretation https://tess.elixir-europe.org/events/introduction-to-identifying-and-characterising-variants-from-ngs-data-d9eff52c-bd15-4e71-a1b8-a008ca616d24 This course covers state-of-the-art and best-practice tools for the analysis of genomes. We describe, and give hands-on experience of, the entire analysis workflow from raw data generated by a sequencing machine to deriving variant calls (e.g. Single Nucleotide Variants) that are ready for downstream analysis, interpretation and prioritisation. We will describe the steps involved to go from sequencing library to a prioritised, clinically-relevant list of DNA variants. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control, variant-calling and annotation. 2018-11-06 09:30:00 UTC 2018-11-07 17:00:00 UTC Bartolome House, Computer Room ALG04, Sheffield, United Kingdom Bartolome House, Computer Room ALG04 Sheffield United Kingdom S3 7ND [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • CABANA Train the Trainer Workshop

    15 - 16 November 2018

    Bogota, Colombia

    Elixir node event
    CABANA Train the Trainer Workshop https://tess.elixir-europe.org/events/cabana-train-the-trainer-workshop This course will provide new trainers with knowledge, skills, guidance and tips for developing and delivering training. 2018-11-15 09:30:00 UTC 2018-11-16 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Alejandro Reyes [] [] [] [] []
  • Untapping diversity through Metagenomics: An Introductory Workshop

    3 - 6 December 2018

    Bogota, Colombia

    Elixir node event
    Untapping diversity through Metagenomics: An Introductory Workshop https://tess.elixir-europe.org/events/untapping-diversity-through-metagenomics-an-introductory-workshop In this course participants will learn the basics of metagenomics, covering experimental design and workflows, moving through to microbiome analysis via amplicon sequencing and shotgun metagenomics. 2018-12-03 08:30:00 UTC 2018-12-06 17:30:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Alejandro Reyes [] [] [] [] []
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