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  • The Nucleosome: From Atoms to Genomes

    30 August - 1 September 2017

    Heidelberg, Germany

    The Nucleosome: From Atoms to Genomes https://tess.elixir-europe.org/events/the-nucleosome-from-atoms-to-genomes The aim of this conference is to integrate and extend understanding of the links between nucleosome structural properties and the functional roles of chromatin. This will enable new insights into the relationship between atomic details and genome-wide behaviour at the heart of the highly conserved histone-based packaging of eukaryotic genomes. 2017-08-30 00:00:00 UTC 2017-09-01 00:00:00 UTC EMBL, Heidelberg, Germany EMBL Heidelberg Germany Bioinformatics [] [] [] meetings_and_conferences [] []
  • Whole Transcriptome Data Analysis

    3 - 6 October 2017

    Heidelberg, Germany

    Whole Transcriptome Data Analysis https://tess.elixir-europe.org/events/whole-transcriptome-data-analysis-e1246024-76e6-4430-aa04-b03a605ad7ca The course participants will use BioConductor software and Illumina BaseSpace Cloud apps. R-coding skills and deep knowledge of statistics are not necessary for attendance because most analyses will be performed with OneChannelGUI (a graphical interface to a series of BioConductor tools, which enables handling microarray data analysis as well as RNA-seq data without requiring programming skills). Computers for hands-on exercises will be provided along with demo data sets. Upon request, participants could bring along their own data to analyse. 2017-10-03 00:00:00 UTC 2017-10-06 00:00:00 UTC Heidelberg, Germany Heidelberg Germany Bioinformatics [] [] [] workshops_and_courses [] []
  • Mammalian Genetics and Genomics

    24 - 27 October 2017

    Heidelberg, Germany

    Mammalian Genetics and Genomics https://tess.elixir-europe.org/events/mammalian-genetics-and-genomics The EMBL Conference Mammalian Genetics and Genomics: From Molecular Mechanisms to Translational Applications is a joint meeting of the International Mammalian Genome Society (IMGS) and the Mouse Molecular Genetics (MMG) meeting. This meeting will provide an international forum for the sharing of cutting-edge research in genetics and genomics that addresses fundamental areas of mammalian biology. The conference will include presentations by established and junior investigators, including trainees, and will include trainee mentoring events, workshops, and networking opportunities within a stimulating and welcoming environment. 2017-10-24 00:00:00 UTC 2017-10-27 00:00:00 UTC Heidelberg, Germany Heidelberg Germany Genomics [] [] [] meetings_and_conferences [] []
  • Cancer Genomics

    5 - 8 November 2017

    Heidelberg, Germany

    Cancer Genomics https://tess.elixir-europe.org/events/cancer-genomics-7664850b-6647-4f9d-a30b-4ec772e79fb2 This conference will provide an opportunity to learn about and keep up to date with the rapidly progressing area of cancer genomics. It will cover presentations from cancer genome projects, the areas of cancer functional genomics, systems biology, cancer mouse models and the translation and clinical impact of scientific results obtained. The meeting will bring together leading scientists from across these areas for a unique opportunity to interact and stimulate further integration of these efforts. 2017-11-05 00:00:00 UTC 2017-11-08 00:00:00 UTC EMBL, Heidelberg, Germany EMBL Heidelberg Germany Bioinformatics [] [] [] meetings_and_conferences [] []
  • VEPTC 2017 Practical Session: The Ensembl Genome Browser

    6 - 8 November 2017

    Prague, Czech Republic

    Elixir node event
    VEPTC 2017 Practical Session: The Ensembl Genome Browser https://tess.elixir-europe.org/events/veptc-2017-practical-session-the-ensembl-genome-browser Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing variation data, and annotating variants with the Variant Effect Predictor (VEP) 2017-11-06 09:00:00 UTC 2017-11-08 18:00:00 UTC NH Prague City Hotel, Prague, Czech Republic NH Prague City Hotel Prague Czech Republic 150 00 Praha 5 [] Benjamin Moore [] [] [] [] HDRUK
  • Chemical Proteomics 2017, 1 ECTS credit

    7 - 9 November 2017

    Stockholm

    Elixir node event
    Chemical Proteomics 2017, 1 ECTS credit https://tess.elixir-europe.org/events/chemical-proteomics-2017-1-hp 2017-11-07 09:00:00 UTC 2017-11-09 00:00:00 UTC Stockholm Stockholm [] [] [] workshops_and_courses [] []
  • EMBL-EBI Bioinformatics resources for exploring functional genomics data

    9 - 10 November 2017

    Heidelberg, Germany

    Elixir node event
    EMBL-EBI Bioinformatics resources for exploring functional genomics data https://tess.elixir-europe.org/events/embl-ebi-bioinformatics-resources-for-exploring-functional-genomics-data This course will provide participants with an introduction to functional genomics resources at EMBL-EBI, in particular to ArrayExpress (one of the ELIXIR core data resources) and Expression Atlas. 2017-11-09 09:30:00 UTC 2017-11-10 17:30:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Monika Kulka-Schuh [] [] [] [] HDRUK
  • ChIP-seq data analysis, 1 hp

    23 - 24 November 2017

    Stockholm

    Elixir node event
    ChIP-seq data analysis, 1 hp https://tess.elixir-europe.org/events/chip-seq-data-analysis-1-hp 2017-11-23 09:00:00 UTC 2017-11-24 00:00:00 UTC Stockholm Stockholm [] [] [] workshops_and_courses [] []
  • Ensembl Browser Workshop, DKFZ, 28th November 2017

    28 November 2017

    Heidelberg, Germany

    Elixir node event
    Ensembl Browser Workshop, DKFZ, 28th November 2017 https://tess.elixir-europe.org/events/ensembl-browser-workshop-dkfz-28th-november-2017 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2017-11-28 09:00:00 UTC 2017-11-28 09:00:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Monika Kulka-Schuh [] [] [] [] HDRUK
  • Ensembl Browser workshop, DKFZ, 30th November 2017

    30 November 2017

    Heidelberg, Germany

    Elixir node event
    Ensembl Browser workshop, DKFZ, 30th November 2017 https://tess.elixir-europe.org/events/ensembl-browser-workshop-dkfz-30th-november-2017 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2017-11-30 09:00:00 UTC 2017-11-30 09:00:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Monika Kulka-Schuh [] [] [] [] HDRUK
  • Cryo-EM image handling

    4 - 8 December 2017

    Stockholm

    Elixir node event
    Cryo-EM image handling https://tess.elixir-europe.org/events/cryo-em-image-handling 2017-12-04 09:00:00 UTC 2017-12-08 00:00:00 UTC Stockholm Stockholm [] [] [] workshops_and_courses [] []
  • Cryo-EM image processing

    4 - 8 December 2017

    Stockholm

    Elixir node event
    Cryo-EM image processing https://tess.elixir-europe.org/events/cryo-em-image-processing 2017-12-04 09:00:00 UTC 2017-12-08 00:00:00 UTC Stockholm Stockholm [] [] [] workshops_and_courses [] []
  • CESNET e-infrastructure workshop

    11 December 2017

    Prague, Czechia

    Elixir node event
    CESNET e-infrastructure workshop https://tess.elixir-europe.org/events/cesnet-e-infrastructure-workshop In Czech, CESNET, GEANT, DataCare, Metacentrum, HPC, ELIXIR, EDGAIN, SAGElab, Cloud computing 2017-12-11 08:30:00 UTC 2017-12-11 16:45:00 UTC CESNET Thákurova 550/1, 1, Thákurova, Prague, Czechia Thákurova 550/1, 1, Thákurova Prague Hlavní město Praha Czechia Data security Database management Data management Computer science [] [] PhD studentspostdocLife Science Researchers 200 meetings_and_conferences registration_of_interest Cloud computingcomputer-scienceDatabases
  • Data Manipulation and Visualisation using R

    15 December 2017

    Sheffield, United Kingdom

    Data Manipulation and Visualisation using R https://tess.elixir-europe.org/events/data-manipulation-and-visualisation-using-r It has been said that 80% of data analysis is spent on the process of cleaning and preparing the data. In this course we introduce some relatively-new additions to the R programming language; dplyr and ggplot2. In combination these provide a powerful toolkit to make the process of manipulating and visualising data easy and intuitive. 2017-12-15 09:30:00 UTC 2017-12-15 17:00:00 UTC Pam Liversidge Design Studio 2 - E06, Sheffield, United Kingdom Pam Liversidge Design Studio 2 - E06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • NGS - Quality control, Alignment, Visualisation

    9 - 10 January 2018

    Bern

    Elixir node event
    NGS - Quality control, Alignment, Visualisation https://tess.elixir-europe.org/events/ngs-quality-control-alignment-visualisation Please note that this course is oversubscribed. We are not accepting applications, not even for the waiting list anymore. Overview Usage of NGS is increasing in several biological fields due to a very rapid decrease in cost. 2018-01-09 09:00:00 UTC 2018-01-10 00:00:00 UTC SIB, Bern SIB Bern [] training@sib.swiss [] [] workshops_and_courses [] []
  • NGS - Genome variant analysis

    6 - 7 February 2018

    Bern

    Elixir node event
    NGS - Genome variant analysis https://tess.elixir-europe.org/events/ngs-genome-variant-analysis Please note that this course is oversubscribed. We are still accepting applications, but your name will be placed on a waiting list. 2018-02-06 09:00:00 UTC 2018-02-07 00:00:00 UTC SIB, Bern SIB Bern [] training@sib.swiss [] [] workshops_and_courses [] []
  • Ensembl Browser Workshop, Bogota, 11 February 2018

    11 February 2018

    Bogota, Colombia

    Elixir node event
    Ensembl Browser Workshop, Bogota, 11 February 2018 https://tess.elixir-europe.org/events/ensembl-browser-workshop-bogota-11-february-2018 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2018-02-11 09:00:00 UTC 2018-02-11 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] []
  • Introductory Linux Tutorial for Life Sciences

    13 - 15 February 2018

    Stockholm

    Elixir node event
    Introductory Linux Tutorial for Life Sciences https://tess.elixir-europe.org/events/introductory-linux-tutorial-for-life-sciences 2018-02-13 09:00:00 UTC 2018-02-15 00:00:00 UTC Stockholm Stockholm [] [] [] workshops_and_courses [] []
  • Biobanks as a resource for biomedical research – CANCELLED

    5 - 9 March 2018

    Stockholm

    Elixir node event
    Biobanks as a resource for biomedical research – CANCELLED https://tess.elixir-europe.org/events/biobanks-as-a-resource-for-biomedical-research-1-5-ects-credits 2018-03-05 09:00:00 UTC 2018-03-09 00:00:00 UTC Stockholm Stockholm [] [] [] workshops_and_courses [] []
  • Tools for reproducible research

    22 - 23 March 2018

    Stockholm

    Elixir node event
    Tools for reproducible research https://tess.elixir-europe.org/events/tools-for-reproducible-research-1hp 2018-03-22 09:00:00 UTC 2018-03-23 00:00:00 UTC Stockholm Stockholm [] [] [] workshops_and_courses [] []
  • Introduction to R

    26 March 2018

    Sheffield, United Kingdom

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-78ad016f-c086-4c38-95b9-7406d18597f3 R is a highly-regarded, free, software environment for statistical analysis, with many useful features that promote and facilitate reproducible research. In this course, we give an introduction to the R environment and explain how it can be used to import, manipulate and analyse tabular data. After the course you should feel confident to start exploring your own dataset using the materials and references provided. 2018-03-26 08:30:00 UTC 2018-03-26 16:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to RNA-seq

    27 March 2018

    Sheffield, United Kingdom

    Introduction to RNA-seq https://tess.elixir-europe.org/events/introduction-to-rna-seq High-throughput RNA-sequencing is now the standard technique for quantifying transcript abundance in a biological sample of interest. In this course we will describe the processes that take place once you submit a library for RNA sequencing, and what data you should expect to receive from the Bioinformatics Core. We will describe the steps involved to go from sequencing library to a list of genes that show statistically significant differences between your biological conditions of interest. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control and assessing differential expression. We will also showcase some web sites you can use for enrichment and pathways analysis. 2018-03-27 08:30:00 UTC 2018-03-27 16:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Antibody based technologies

    10 - 11 April 2018

    Stockholm

    Elixir node event
    Antibody based technologies https://tess.elixir-europe.org/events/antibody-based-technologies-1-ects-hp 2018-04-10 09:00:00 UTC 2018-04-11 00:00:00 UTC Stockholm Stockholm [] [] [] workshops_and_courses [] []
  • Opportunities with affinity proteomics, 1 ECTS / hp

    10 - 11 April 2018

    Stockholm

    Elixir node event
    Opportunities with affinity proteomics, 1 ECTS / hp https://tess.elixir-europe.org/events/opportunities-with-affinity-proteomics-1-ects-hp 2018-04-10 09:00:00 UTC 2018-04-11 16:00:00 UTC Stockholm Stockholm [] [] [] workshops_and_courses [] []
  • First steps with R in Life Sciences

    19 - 20 April 2018

    Bern, Switzerland

    Elixir node event
    First steps with R in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-9438ac46-684f-4653-bd28-f2c3525fd43f The course is full. Overview R is a complete, flexible and open source system for statistical analysis and graphics, which has become a tool of choice for biologists and biomedical scientists who need to analyse and visualise large amounts of data. 2018-04-19 09:00:00 UTC 2018-04-20 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Best practices in Research Data Management for Biological Sciences

    30 April 2018

    Sheffield, United Kingdom

    Best practices in Research Data Management for Biological Sciences https://tess.elixir-europe.org/events/best-practices-in-research-data-management-for-biological-sciences As a researcher, you will encounter research data in many forms, ranging from measurements, numbers and images to documents and publications. Whether you create, receive or collect data, you will certainly need to organise it at some stage of your project. This workshop will provide an overview of some basic principles on how we can work with data more effectively. We will discuss the best practices for research data management and organisation so that our research is auditable and reproducible by ourselves, and others, in the future. 2018-04-30 12:00:00 UTC 2018-04-30 15:30:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Prague Protein Spring 2018

    3 - 6 May 2018

    Prague, Czechia

    Prague Protein Spring 2018 https://tess.elixir-europe.org/events/prague-protein-spring-2018 PPS 2018 aims to cover a thematic issue: "Proteins at Work" addressing concepts and system approaches demonstrated on selected general topics: "Proteins in living cells", "Large Scale organization of Proteins", "Proteins in Biomineralization" and "Integrating knowledge about Proteins at the systems' level". Detailed scientific programme: https://www.pragueproteinspring.cz/scientific-program 2018-05-03 18:00:00 UTC 2018-05-06 12:00:00 UTC Institute of Organic Chemistry and Biochemistry AS CR Vila Lanna, V Sadech 1, Prague, Czechia Vila Lanna, V Sadech 1 Prague Czechia 160 00 [] https://www.pragueproteinspring.cz/contacts [] ResearchersPhD students meetings_and_conferences first_come_first_served []
  • Single cell RNA sequencing data analysis

    21 - 23 May 2018

    Stockholm

    Elixir node event
    Single cell RNA sequencing data analysis https://tess.elixir-europe.org/events/single-cell-rna-sequencing-data-analysis 2018-05-21 09:00:00 UTC 2018-05-23 00:00:00 UTC Stockholm Stockholm [] [] [] workshops_and_courses [] []
  • RNA-seq: From quality control to pathway analysis

    30 - 31 May 2018

    Bern, Switzerland

    Elixir node event
    RNA-seq: From quality control to pathway analysis https://tess.elixir-europe.org/events/rna-seq-from-quality-control-to-pathway-analysis This course is oversubscribed. Overview This course will present all the bioinformatics tools required to analyze RNA-seq gene expression data, from the raw data to the biological interpretation. 2018-05-30 09:00:00 UTC 2018-05-31 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to identifying and characterising variants from NGS data

    4 - 5 June 2018

    Sheffield, United Kingdom

    Introduction to identifying and characterising variants from NGS data https://tess.elixir-europe.org/events/introduction-to-identifying-and-characterising-variants-from-ngs-data This course covers state-of-the-art and best-practice tools for the analysis of genomes. We describe, and give hands-on experience of, the entire analysis workflow from raw data generated by a sequencing machine to deriving variant calls (e.g. Single Nucleotide Variants) that are ready for downstream analysis, interpretation and prioritisation. We will describe the steps involved to go from sequencing library to a prioritised, clinically-relevant list of DNA variants. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control, variant-calling and annotation. 2018-06-04 08:30:00 UTC 2018-06-05 16:00:00 UTC Pam Liversidge Design Studio 2 - E06, Sheffield, United Kingdom Pam Liversidge Design Studio 2 - E06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
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