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399 events found

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  • Data Manipulation and Visualisation using R

    15 December 2017

    Sheffield, United Kingdom

    Data Manipulation and Visualisation using R https://tess.elixir-europe.org/events/data-manipulation-and-visualisation-using-r It has been said that 80% of data analysis is spent on the process of cleaning and preparing the data. In this course we introduce some relatively-new additions to the R programming language; dplyr and ggplot2. In combination these provide a powerful toolkit to make the process of manipulating and visualising data easy and intuitive. 2017-12-15 09:30:00 UTC 2017-12-15 17:00:00 UTC Pam Liversidge Design Studio 2 - E06, Sheffield, United Kingdom Pam Liversidge Design Studio 2 - E06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Ensembl Browser Workshop, Bogota, 11 February 2018

    11 February 2018

    Bogota, Colombia

    Elixir node event
    Ensembl Browser Workshop, Bogota, 11 February 2018 https://tess.elixir-europe.org/events/ensembl-browser-workshop-bogota-11-february-2018 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2018-02-11 09:00:00 UTC 2018-02-11 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] []
  • Introduction to R

    26 March 2018

    Sheffield, United Kingdom

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-78ad016f-c086-4c38-95b9-7406d18597f3 R is a highly-regarded, free, software environment for statistical analysis, with many useful features that promote and facilitate reproducible research. In this course, we give an introduction to the R environment and explain how it can be used to import, manipulate and analyse tabular data. After the course you should feel confident to start exploring your own dataset using the materials and references provided. 2018-03-26 08:30:00 UTC 2018-03-26 16:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to RNA-seq

    27 March 2018

    Sheffield, United Kingdom

    Introduction to RNA-seq https://tess.elixir-europe.org/events/introduction-to-rna-seq High-throughput RNA-sequencing is now the standard technique for quantifying transcript abundance in a biological sample of interest. In this course we will describe the processes that take place once you submit a library for RNA sequencing, and what data you should expect to receive from the Bioinformatics Core. We will describe the steps involved to go from sequencing library to a list of genes that show statistically significant differences between your biological conditions of interest. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control and assessing differential expression. We will also showcase some web sites you can use for enrichment and pathways analysis. 2018-03-27 08:30:00 UTC 2018-03-27 16:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Best practices in Research Data Management for Biological Sciences

    30 April 2018

    Sheffield, United Kingdom

    Best practices in Research Data Management for Biological Sciences https://tess.elixir-europe.org/events/best-practices-in-research-data-management-for-biological-sciences As a researcher, you will encounter research data in many forms, ranging from measurements, numbers and images to documents and publications. Whether you create, receive or collect data, you will certainly need to organise it at some stage of your project. This workshop will provide an overview of some basic principles on how we can work with data more effectively. We will discuss the best practices for research data management and organisation so that our research is auditable and reproducible by ourselves, and others, in the future. 2018-04-30 12:00:00 UTC 2018-04-30 15:30:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to identifying and characterising variants from NGS data

    4 - 5 June 2018

    Sheffield, United Kingdom

    Introduction to identifying and characterising variants from NGS data https://tess.elixir-europe.org/events/introduction-to-identifying-and-characterising-variants-from-ngs-data This course covers state-of-the-art and best-practice tools for the analysis of genomes. We describe, and give hands-on experience of, the entire analysis workflow from raw data generated by a sequencing machine to deriving variant calls (e.g. Single Nucleotide Variants) that are ready for downstream analysis, interpretation and prioritisation. We will describe the steps involved to go from sequencing library to a prioritised, clinically-relevant list of DNA variants. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control, variant-calling and annotation. 2018-06-04 08:30:00 UTC 2018-06-05 16:00:00 UTC Pam Liversidge Design Studio 2 - E06, Sheffield, United Kingdom Pam Liversidge Design Studio 2 - E06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • PhenoMeNal Gateway: Portal to metabolomics data analysis in the cloud

    6 - 8 June 2018

    Hinxton, United Kingdom

    Elixir node event
    PhenoMeNal Gateway: Portal to metabolomics data analysis in the cloud https://tess.elixir-europe.org/events/phenomenal-gateway-portal-to-metabolomics-data-analysis-in-the-cloud This course will provide an introduction to metabolomics data analysis in a cloud computing environment, using infrastructure developed by the PhenoMeNal project. 2018-06-06 09:30:00 UTC 2018-06-08 13:00:00 UTC Tennis Court Suite, Wellcome Genome Campus, Hinxton, United Kingdom Tennis Court Suite, Wellcome Genome Campus Hinxton United Kingdom CB10 1SD [] Frank O’Donnell [] [] [] [] []
  • Introduction to RNA-seq analysis in R

    9 - 10 July 2018

    Sheffield, United Kingdom

    Introduction to RNA-seq analysis in R https://tess.elixir-europe.org/events/introduction-to-rna-seq-analysis-in-r In this workshop, you will be learning how to analyse RNA-seq count data, using R. This will include reading the data into R, quality control and performing differential expression analysis and gene set testing, with a focus on the edgeR analysis workflow. You will learn how to generate common plots for analysis and visualisation of gene expression data, such as boxplots and heatmaps. You will also be learning how alignment and counting of raw RNA-seq data can be performed in R. This workshop is aimed at biologists interested in learning how to perform differential expression analysis of RNA-seq data when reference genomes are available.. 2018-07-09 08:30:00 UTC 2018-07-10 16:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to R

    20 September 2018

    Sheffield, United Kingdom

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-0eafb926-c56e-48c8-8212-d96bf47ea7f4 R is a highly-regarded, free, software environment for statistical analysis, with many useful features that promote and facilitate reproducible research. In this course, we give an introduction to the R environment and explain how it can be used to import, manipulate and analyse tabular data. After the course you should feel confident to start exploring your own dataset using the materials and references provided. 2018-09-20 08:30:00 UTC 2018-09-20 16:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to Statistical Analysis

    24 October 2018

    Sheffield, United Kingdom

    Introduction to Statistical Analysis https://tess.elixir-europe.org/events/introduction-to-statistical-analysis-57925cde-fdc6-49b3-8b1b-a66ccea04dd6 This course provides a refresher on the foundations of statistical analysis. Practicals are conducted using the ‘Shiny’ package; which provides an accessible interface to the R statistical language. Note that this is not a course for learning about the R statistical language itself. If you wish to learn more about R, please see other courses at the Sheffield Bioinformatics Core. 2018-10-24 10:00:00 UTC 2018-10-24 16:00:00 UTC Pam Liversidge Design Studio 2 - E06, Sheffield, United Kingdom Pam Liversidge Design Studio 2 - E06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Machine Learning for Image Analysis

    29 - 31 October 2018

    Heidelberg, Germany

    Elixir node event
    Machine Learning for Image Analysis https://tess.elixir-europe.org/events/machine-learning-for-image-analysis This is a blended learning course on Machine Learning for Image Analysis, consisting of three online sessions with associated hands-on exercises prior to the workshop, a three day face-to-face workshop at EMBL Heidelberg and two optional online sessions with associated hands-on exercises after the workshop. The course is organised jointly by CORBEL, EMBL, German BioImaging and NEUBIAS. 2018-10-29 09:00:00 UTC 2018-10-31 16:15:00 UTC EMBL, Heidelberg, Germany EMBL Heidelberg Germany 69117 [] Charlotte Pearton [] [] [] [] []
  • Introduction to Genomic Variant Interpretation

    6 - 7 November 2018

    Sheffield, United Kingdom

    Introduction to Genomic Variant Interpretation https://tess.elixir-europe.org/events/introduction-to-identifying-and-characterising-variants-from-ngs-data-d9eff52c-bd15-4e71-a1b8-a008ca616d24 This course covers state-of-the-art and best-practice tools for the analysis of genomes. We describe, and give hands-on experience of, the entire analysis workflow from raw data generated by a sequencing machine to deriving variant calls (e.g. Single Nucleotide Variants) that are ready for downstream analysis, interpretation and prioritisation. We will describe the steps involved to go from sequencing library to a prioritised, clinically-relevant list of DNA variants. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control, variant-calling and annotation. 2018-11-06 09:30:00 UTC 2018-11-07 17:00:00 UTC Bartolome House, Computer Room ALG04, Sheffield, United Kingdom Bartolome House, Computer Room ALG04 Sheffield United Kingdom S3 7ND [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • CABANA Train the Trainer Workshop

    15 - 16 November 2018

    Bogota, Colombia

    Elixir node event
    CABANA Train the Trainer Workshop https://tess.elixir-europe.org/events/cabana-train-the-trainer-workshop This course will provide new trainers with knowledge, skills, guidance and tips for developing and delivering training. 2018-11-15 09:30:00 UTC 2018-11-16 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Alejandro Reyes [] [] [] [] []
  • Untapping diversity through Metagenomics: An Introductory Workshop

    3 - 6 December 2018

    Bogota, Colombia

    Elixir node event
    Untapping diversity through Metagenomics: An Introductory Workshop https://tess.elixir-europe.org/events/untapping-diversity-through-metagenomics-an-introductory-workshop In this course participants will learn the basics of metagenomics, covering experimental design and workflows, moving through to microbiome analysis via amplicon sequencing and shotgun metagenomics. 2018-12-03 08:30:00 UTC 2018-12-06 17:30:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Alejandro Reyes [] [] [] [] []
  • CABANA Workshop: Untapping diversity through Metagenomics: An Introductory Workshop

    3 - 6 December 2018

    Bogota, Colombia

    Elixir node event
    CABANA Workshop: Untapping diversity through Metagenomics: An Introductory Workshop https://tess.elixir-europe.org/events/cabana-workshop-untapping-diversity-through-metagenomics-an-introductory-workshop In this course participants will learn the basics of metagenomics, covering experimental design and workflows, moving through to microbiome analysis via amplicon sequencing and shotgun metagenomics. 2018-12-03 08:30:00 UTC 2018-12-06 17:30:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Alejandro Reyes [] [] [] [] []
  • Introduction to R

    10 December 2018

    Sheffield, United Kingdom

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-547c0a39-1293-4c80-a1f4-aee7d7ea3206 R is a highly-regarded, free, software environment for statistical analysis, with many useful features that promote and facilitate reproducible research. In this course, we give an introduction to the R environment and explain how it can be used to import, manipulate and analyse tabular data. After the course you should feel confident to start exploring your own dataset using the materials and references provided. 2018-12-10 09:30:00 UTC 2018-12-10 17:00:00 UTC Pam Liversidge Design Studio 1 - D06, Sheffield, United Kingdom Pam Liversidge Design Studio 1 - D06 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to RNA-seq

    17 December 2018

    Sheffield, United Kingdom

    Introduction to RNA-seq https://tess.elixir-europe.org/events/introduction-to-rna-seq-dc2e12e3-0a12-4693-8997-63651830ecf9 High-throughput RNA-sequencing is now the standard technique for quantifying transcript abundance in a biological sample of interest. In this course we will describe the processes that take place once you submit a library for RNA sequencing, and what data you should expect to receive from the Bioinformatics Core. We will describe the steps involved to go from sequencing library to a list of genes that show statistically significant differences between your biological conditions of interest. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control and assessing differential expression. We will also showcase some web sites you can use for enrichment and pathways analysis. 2018-12-17 09:30:00 UTC 2018-12-17 17:00:00 UTC The Diamond, Workroom 1, Sheffield, United Kingdom The Diamond, Workroom 1 Sheffield United Kingdom S3 7RD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to RNA-seq analysis in R

    14 January 2019

    Sheffield, United Kingdom

    Introduction to RNA-seq analysis in R https://tess.elixir-europe.org/events/introduction-to-rna-seq-analysis-in-r-59e3e3ee-b3da-4704-af24-63173b7bafde In this workshop, you will be learning how to analyse RNA-seq count data, using R. This will include reading the data into R, quality control and performing differential expression analysis and gene set testing, with a focus on the edgeR analysis workflow. You will learn how to generate common plots for analysis and visualisation of gene expression data, such as boxplots and heatmaps. You will also be learning how alignment and counting of raw RNA-seq data can be performed in R. This workshop is aimed at biologists interested in learning how to perform differential expression analysis of RNA-seq data when reference genomes are available.. 2019-01-14 09:30:00 UTC 2019-01-14 17:00:00 UTC The Diamond, Workroom 1, Sheffield, United Kingdom The Diamond, Workroom 1 Sheffield United Kingdom S3 7RD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Bioinformatics for Discovery

    23 January 2019

    Hinxton, United Kingdom

    Bioinformatics for Discovery https://tess.elixir-europe.org/events/bioinformatics-for-discovery-f51fe25c-6f52-4589-b79c-5f829803f89a In this 90 min long tutorial, we will introduce the Open Targets and its other tools to aid drug target identification and prioritisation. This workshop is part of the Bioinformatics for Discovery course and is aimed at bench biologists working in the area of discovery science who want to learn more about bioinformatics tools and resources. No prior knowledge of bioinformatics is required and no experience of programming or the use of Unix / Linux is necessary. . 2019-01-23 09:00:00 UTC 2019-01-23 00:00:00 UTC EMBL-EBI European Bioinformatics Institute Main Building, Hinxton, United Kingdom EMBL-EBI European Bioinformatics Institute Main Building Hinxton Cambridgeshire United Kingdom [] [] [] workshops_and_courses [] Open Targets
  • Ensembl Browser Workshop, DKFZ Heidelberg, 29 January 2019

    29 January 2019

    Heidelberg, Germany

    Elixir node event
    Ensembl Browser Workshop, DKFZ Heidelberg, 29 January 2019 https://tess.elixir-europe.org/events/ensembl-browser-workshop-dkfz-heidelberg-29-january-2019 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2019-01-29 09:00:00 UTC 2019-01-29 17:00:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Astrid Gall [] [] [] [] []
  • Ensembl Browser Workshop, DKFZ Heidelberg, 30 January 2019

    30 January 2019

    Heidelberg, Germany

    Elixir node event
    Ensembl Browser Workshop, DKFZ Heidelberg, 30 January 2019 https://tess.elixir-europe.org/events/ensembl-browser-workshop-dkfz-heidelberg-30-january-2019 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2019-01-30 09:00:00 UTC 2019-01-30 17:00:00 UTC Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC), Heidelberg, Germany Deutsches Krebsforschungszentrum (DKFZ) - German Cancer Research Centre (GCRC) Heidelberg Germany 69120 [] Astrid Gall [] [] [] [] []
  • Ensembl browser and REST API course, Gebze Tech University

    4 - 6 February 2019

    Gebze, Turkey

    Elixir node event
    Ensembl browser and REST API course, Gebze Tech University https://tess.elixir-europe.org/events/ensembl-browser-and-rest-api-course-gebze-tech-university Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. Then learn to flexibly access these data using the Ensembl REST APIs in Python, Perl or R. 2019-02-04 09:00:00 UTC 2019-02-06 17:00:00 UTC Gebze Technical University, Gebze, Turkey Gebze Technical University Gebze Turkey 41400 [] Emily Perry [] [] [] [] []
  • Introduction to R

    7 February 2019

    Sheffield, United Kingdom

    Introduction to R https://tess.elixir-europe.org/events/introduction-to-r-1a71189d-660b-4509-b4b3-c3298dcefd0e R is a highly-regarded, free, software environment for statistical analysis, with many useful features that promote and facilitate reproducible research. In this course, we give an introduction to the R environment and explain how it can be used to import, manipulate and analyse tabular data. After the course you should feel confident to start exploring your own dataset using the materials and references provided. 2019-02-07 09:30:00 UTC 2019-02-07 17:00:00 UTC The Diamond - Workroom 2, Sheffield, United Kingdom The Diamond - Workroom 2 Sheffield United Kingdom S1 3JD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Ensembl Browser Workshop, Bogota, 11 February 2019

    11 February 2019

    Bogota, Colombia

    Elixir node event
    Ensembl Browser Workshop, Bogota, 11 February 2019 https://tess.elixir-europe.org/events/ensembl-browser-workshop-bogota-11-february-2019 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2019-02-11 09:00:00 UTC 2019-02-11 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] []
  • Ensembl REST API Workshop, Bogota, 12 February 2018

    12 February 2019

    Bogota, Colombia

    Elixir node event
    Ensembl REST API Workshop, Bogota, 12 February 2018 https://tess.elixir-europe.org/events/ensembl-rest-api-workshop-bogota-12-february-2018 Work with Ensembl to master the Ensembl REST APIs and flexibly access genome-wide data, such as genes, variants, regulatory features, homologues and alignments. 2019-02-12 09:00:00 UTC 2019-02-12 15:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] []
  • Ensembl REST API Workshop, Bogota, 12 February 2019

    12 February 2019

    Bogota, Colombia

    Elixir node event
    Ensembl REST API Workshop, Bogota, 12 February 2019 https://tess.elixir-europe.org/events/ensembl-rest-api-workshop-bogota-12-february-2019 Work with Ensembl to master the Ensembl REST APIs and flexibly access genome-wide data, such as genes, variants, regulatory features, homologues and alignments. 2019-02-12 09:00:00 UTC 2019-02-12 15:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] []
  • EMBL-EBI Intro to multiomics data integration

    13 February 2019

    Hinxton, United Kingdom

    EMBL-EBI Intro to multiomics data integration https://tess.elixir-europe.org/events/embl-ebi-intro-to-multiomics-data-integration In this 1 hour tutorial, we will highlight how the Open Targets integrates genetics, genomics, drug information and literature in a single web portal, the Open Targets Platform . This workshop is part of the EMBL-EBI Intro to multiomics data integration course and is imed at biologists who have some experience of working with at least one type of omics data, and computational biologists/bioinformaticians who wish to gain a better understanding of the biological challenges when working with integrated datasets. No programming or command line experience is required to attend this course. 2019-02-13 09:00:00 UTC 2019-02-13 00:00:00 UTC EMBL-EBI European Bioinformatics Institute Main Building, Hinxton, United Kingdom EMBL-EBI European Bioinformatics Institute Main Building Hinxton Cambridgeshire United Kingdom [] [] [] workshops_and_courses [] Open Targets
  • RNA-seq Analysis for Beginners

    4 March 2019

    Sheffield, United Kingdom

    RNA-seq Analysis for Beginners https://tess.elixir-europe.org/events/introduction-to-rna-seq-15076391-e5f2-4c5c-8ea3-5b925a66b8a3 High-throughput RNA-sequencing is now the standard technique for quantifying transcript abundance in a biological sample of interest. In this course we will describe the processes that take place once you submit a library for RNA sequencing, and what data you should expect to receive from the Bioinformatics Core. We will describe the steps involved to go from sequencing library to a list of genes that show statistically significant differences between your biological conditions of interest. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control and assessing differential expression. We will also showcase some web sites you can use for enrichment and pathways analysis. 2019-03-04 09:30:00 UTC 2019-03-04 17:00:00 UTC Pam Liversidge Building, Design Studio 1, D06, Sheffield, United Kingdom Pam Liversidge Building, Design Studio 1, D06 Sheffield United Kingdom S3 7RD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Data Manipulation and Visualisation

    29 March 2019

    Sheffield, United Kingdom

    Data Manipulation and Visualisation https://tess.elixir-europe.org/events/data-manipulation-and-visualisation R is a highly-regarded, free, software environment for statistical analysis, with many useful features that promote and facilitate reproducible research. In this course, we give an introduction to the R environment and explain how it can be used to import, manipulate and analyse tabular data. After the course you should feel confident to start exploring your own dataset using the materials and references provided. 2019-03-29 09:30:00 UTC 2019-03-29 17:00:00 UTC Bartolome House, Computer Room ALG04, Sheffield, United Kingdom Bartolome House, Computer Room ALG04 Sheffield United Kingdom S3 7ND [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
  • Introduction to RNA-seq

    11 April 2019

    Sheffield, United Kingdom

    Introduction to RNA-seq https://tess.elixir-europe.org/events/introduction-to-rna-seq-03705bbf-08b1-4e5d-b3ff-d48069b094b4 High-throughput RNA-sequencing is now the standard technique for quantifying transcript abundance in a biological sample of interest. In this course we will describe the processes that take place once you submit a library for RNA sequencing, and what data you should expect to receive from the Bioinformatics Core. We will describe the steps involved to go from sequencing library to a list of genes that show statistically significant differences between your biological conditions of interest. Practical sessions will use the user-friendly Galaxy interface (https://usegalaxy.org/) to demonstrate tasks such as alignment, quality control and assessing differential expression. We will also showcase some web sites you can use for enrichment and pathways analysis. 2019-04-11 08:30:00 UTC 2019-04-11 16:00:00 UTC The Diamond, Workroom 1, Sheffield, United Kingdom The Diamond, Workroom 1 Sheffield United Kingdom S3 7RD [] bioinformatics-core@sheffield.ac.uk [] [] workshops_and_courses [] []
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