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3 events found

Country: United Kingdom 

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City: Bogota  or Heidelberg  or Gebze  or Norwich  or Rotterdam  or Maastricht 

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Keywords: de-novo genome assembly  or python 

  • de novo assembly

    11 - 14 February 2019

    Norwich, United Kingdom

    de novo assembly https://tess.elixir-europe.org/events/de-novo-assembly-2ec75e9e-6b89-4676-91d6-cd55df30e183 The course will provide an introduction to de novo assembly, with a hands on introduction followed by in-depth analysis of the key steps in the process. It covers several aspects such as the initial setup of a de novo genome sequencing project, quality control and preprocessing of datasets, generation and evaluation of first pass assemblies, assembly improvement and finishing. Practical exercises will be performed on small-scale real datasets, including short and long reads. We will present best practices and provide tips based on EI's faculty experience. The course will consist of a mixture of conceptual lectures, methodological lectures and hands on sessions, as well as group activities and discussions. The participants will gain first-hand experience and understanding on NGS assembly, working with the assistance of the faculty, troubleshooting small problems, and reviewing the results. This year, we will be including more in-depth content on working with mixed datasets comprising different sequencing technologies, plus hands sessions covering basic assembly algorithm parameterisation. 2019-02-11 09:00:00 UTC 2019-02-14 17:00:00 UTC Earlham Institute Earlham Institute (EI), Colney Lane, Norwich, United Kingdom Earlham Institute (EI), Colney Lane Norwich Norfolk United Kingdom NR4 7UZ [] training@earlham.ac.uk [] [] workshops_and_courses [] de-novo genome assembly
  • Software Carpentry

    21 - 22 January 2020

    Norwich, United Kingdom

    Software Carpentry https://tess.elixir-europe.org/events/software-carpentry-e28d91b4-59e7-47d7-a7f0-54b3d09e0172 Our goal is to help scientists become more productive by teaching them basic computing skills like program design, version control, testing and task automation. In this two-day bootcamp, short tutorials will alternate with hands-on practical exercises. Participants will be encouraged both to help one another, and to apply what they have learned to their own research problems during and between sessions. 2020-01-21 09:00:00 UTC 2020-01-22 17:00:00 UTC Earlham Institute Earlham Institute (EI), Colney Lane, Norwich, United Kingdom Earlham Institute (EI), Colney Lane Norwich Norfolk United Kingdom NR4 7UZ Earlham Institute training@earlham.ac.uk [] PhD studentspost-docspostgrad workshops_and_courses first_come_first_served SoftwareCarpentrypythonUnix Shell
  • De Novo Assembly 2020

    12 March 2020

    Norwich, United Kingdom

    De Novo Assembly 2020 https://tess.elixir-europe.org/events/de-novo-assembly-2020 The course will provide an introduction to de novo assembly, with a hands on introduction followed by in-depth analysis of the key steps in the process. It covers several aspects such as the initial setup of a de novo genome sequencing project, quality control and preprocessing of datasets, generation and evaluation of first pass assemblies and assembly improvement. 2020-03-12 09:00:00 UTC 2020-03-12 17:00:00 UTC Earlham Institute Earlham Institute (EI), Colney Lane, Norwich, United Kingdom Earlham Institute (EI), Colney Lane Norwich Norfolk United Kingdom NR4 7UZ Earlham Institute training@earlham.ac.uk [] PhD studentspost-docs workshops_and_courses [] De Novode-novo genome assembly

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