Event types: Workshops and courses
Tools for Systems biology modeling and data exchange: COPASI, CellNetAnalyzer, SABIO-RK, FAIRDOMHub/SEEK 2022
9 - 11 August 2022
Heidelberg, GermanyTools for Systems biology modeling and data exchange: COPASI, CellNetAnalyzer, SABIO-RK, FAIRDOMHub/SEEK 2022 https://www.denbi.de/training/1409-tools-for-systems-biology-modeling-and-data-exchange-copasi-cellnetanalyzer-sabio-rk-fairdomhub-seek-2022 https://tess.elixir-europe.org/events/tools-for-systems-biology-modeling-and-data-exchange-copasi-cellnetanalyzer-sabio-rk-fairdomhub-seek-2022 During this 3-day course, attendees will learn basic techniques for modeling of biochemical networks including data access and storage due to the FAIR principles. The first day introduces kinetic modeling techniques which will be illustrated and exercised with COPASI. The second day continues with principles of stoichiometric and constraint-based modeling coupled with hands on exercises using CellNetAnalyzer and a demonstration of CNApy. The third day SABIO-RK is used as a resource for kinetic data and FAIRDOM Hub/SEEK is introduced as a data and model management platform fitted to the needs of systems biologists. The hands on exercises throughout the three days will ensure that attendees become familiar with the software tools and with analyzing, creating, editing, importing, simulating and storing biochemical networks. 2022-08-09 09:00:00 UTC 2022-08-11 17:00:00 UTC de.NBI /ELIXIR-DE BioQUANT, Heidelberg, Germany BioQUANT Heidelberg Germany 69120 University of Heidelberg, BioQUANT Frank T. Bergmann (firstname.lastname@example.org)  ResearcherModellerStudents workshops_and_courses  
Introduction to RNA-Seq: From quality control to pathway analysis
1 - 2 September 2022
Basel, SwitzerlandIntroduction to RNA-Seq: From quality control to pathway analysis https://www.sib.swiss/training/course/20220901_IRNAS https://tess.elixir-europe.org/events/introduction-to-rna-seq-from-quality-control-to-pathway-analysis-d8c6ae2e-37f6-44fe-826e-a3348db94bd4 Overview This two-day course will present the theory and bioinformatics tools required to analyze RNA-seq gene expression data, The course will present the theory and bioinformatics tools required to analyse RNA-seq gene expression data, from the 2022-09-01 09:00:00 UTC 2022-09-02 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland  email@example.com  Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses  
First Steps in Parallelization with OpenMP
23 November 2022
Basel or streamed, SwitzerlandFirst Steps in Parallelization with OpenMP https://www.sib.swiss/training/course/20221123_OPEMP https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp-e78a74a8-b0da-4972-94c8-b58a9b5062e6 Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. In order to benefit from this computational power, we need to devise programs explicitly written for parallel machines. 2022-11-23 09:00:00 UTC 2022-11-23 00:00:00 UTC SIB, Basel or streamed, Switzerland SIB Basel or streamed Switzerland  firstname.lastname@example.org  Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses  
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