FAIR Data Stewardship (basis)
8 October - 19 November 2020
Leiden, NetherlandsFAIR Data Stewardship (basis) https://www.dtls.nl/?post_type=course&p=17883 https://tess.elixir-europe.org/events/fair-data-stewardship-basis Bij onderzoek – in de brede zin van het woord – wordt steeds meer data geproduceerd. Daarbij is de wens dat deze onderzoeksdata bruikbaar blijft voor vervolgonderzoek. In de praktijk gaat dat lastig. Om deze problematiek te adresseren zijn de… The post FAIR Data Stewardship (basis) appeared first on Dutch Techcentre for Life Sciences. 2020-10-08 09:00:00 UTC 2020-11-19 00:00:00 UTC Leiden, Netherlands, Leiden, Netherlands Leiden, Netherlands Leiden Netherlands    workshops_and_courses  
ELIXIR CZ Artificial Intelligence in Life Sciences I
26 - 27 October 2020
Prague, CzechiaELIXIR CZ Artificial Intelligence in Life Sciences I https://www.elixir-czech.cz/events/elixir-cz-artificial-intelligence-in-life-sciences-oct-2020 https://tess.elixir-europe.org/events/elixir-cz-artificial-intelligence-in-life-sciences-i This workshop will provide a basic introduction to machine learning and its application in Life Sciences, with a special focus on molecular and cell biology. Data-driven approaches penetrate various scientific disciplines, including the fields of biology, biochemistry and biotechnology. Novel technologies of high-throughput data collection and advanced data analysis, such as deep neural networks, offer exceptional opportunities for the development of very complex and accurate mathematical models. The theoretical lectures will cover main methods, algorithms and technologies, illustrate their use in biology and biochemistry research using real-life examples. Hands-on practicals will provide participants with essential skills for the application of machine learning methods and software tools for solving problems in Life Sciences. We plan to continue in our effort to organize follow-ups of this meeting and focus on challenging issues in life science disciplines approachable by AI technology. 2020-10-26 11:00:00 UTC 2020-10-27 14:00:00 UTC ELIXIR CZ, IOCB, FNUSA – ICRC, University of West Bohemia Flemingovo nám. 542, 542, Flemingovo náměstí, Prague, Czechia Flemingovo nám. 542, 542, Flemingovo náměstí Prague Hlavní město Praha Czechia 166 10  https://www.elixir-czech.cz/events/elixir-cz-artificial-intelligence-in-life-sciences-oct-2020   75 workshops_and_courses first_come_first_served Artificial Intelligencemachine learningDrug design
DNA Methylation Data Analysis Workshop
2 - 5 November 2020
Berlin, GermanyDNA Methylation Data Analysis Workshop https://www.ecseq.com/workshops/workshop_2020-06-NGS-DNA-Methylation-Data-Analysis https://tess.elixir-europe.org/events/dna-methylation-data-analysis-workshop Advance your epigenetics research with NGS methods. In a nutshell - Learn how bisulfite sequencing works - Understand how bisulfite-treated reads are mapped to a reference genome - Perform basic analyses (call methylated regions, perform basic downstream analyses) - Use shell scripting to create reusable data pipelines - Visualize results (ready-to-publish) The purpose of this workshop is to get a deeper understanding of the use of bisulfite-treated DNA in order to analyze the epigenetic layer of DNA methylation. Advantages and disadvantages of the so-called 'bisulfite sequencing' and its implications on data analyses will be covered. The participants will be trained to understand bisulfite-treated NGS data, to detect potential problems/errors and finally to implement their own pipelines. After this course they will be able to analyze DNA methylation and create ready-to-publish graphics. By the end of this workshop the participants will: - be familiar with the sequencing method of Illumina - understand how bisulfite sequencing works - be aware of the mapping problem of bisulfite-treated data - understand how bisulfite-treated reads are mapped to a reference genome - be familiar with common data formats and standards - know relevant tools for data processing - automate tasks with shell scripting to create reusable data pipelines - perform basic analyses (call methylated regions, perform basic downstream analyses) - plot and visualize results (ready-to-publish) - be able to reuse all analyses 2020-11-02 09:00:00 UTC 2020-11-05 17:00:00 UTC ecSeq Bioinformatics GmbH PC-COLLEGE Berlin, 78, Stresemannstraße, Berlin, Germany PC-COLLEGE Berlin, 78, Stresemannstraße Berlin Germany 10963 Sequencing Sequence analysis Bioinformatics  ecSeq Bioinformatics GmbH Sternwartenstr. 29 D-04103 Leipzig Germany Email: events@ecSeq.com  BiologistsBiologists, Genomicists, Computer ScientistsMolecular BiologistsPhD studentspost-docsPathologistsbioinformaticians 25 workshops_and_courses first_come_first_served EpigeneticsDNA MethylationBisulfite-Seq
31 May - 1 June 2021
Leiden, NetherlandsMetagenomics https://www.dtls.nl/?post_type=course&p=17882 https://tess.elixir-europe.org/events/metagenomics-83dbaacb-0daa-480e-acf2-ef6efbabf796 In this workshop, a general background to metagenomics is provided. The workflow of sample preparation, DNA isolation, platform selection, read mapping, annotation and metagenome assembly is covered. Attention is paid to taxonomic classification, quantification of microbial communities and species richness.… The post Metagenomics appeared first on Dutch Techcentre for Life Sciences. 2021-05-31 09:00:00 UTC 2021-06-01 00:00:00 UTC Leiden, Netherlands, Leiden, Netherlands Leiden, Netherlands Leiden Netherlands    workshops_and_courses  
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