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  • Basic statistics in R

    7 - 21 October 2019

    Leuven, Belgium

    Elixir node event
    Basic statistics in R https://tess.elixir-europe.org/events/basic-statistics-in-r-011ad5b2-0f63-42b2-b89a-164c5e271d37 Get an idea of what R and Rstudio is Use R to handle data: creating, reading, reformatting and writing data Use R to create graphics Use basic statistical techniques in R : normality tests, t-tests, wilcoxon tests, chi square tests, correlations, survival analysis... Write and use R scripts 2019-10-07 09:00:00 UTC 2019-10-21 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Software Carpentry Workshop

    16 - 18 October 2019

    Heidelberg, Germany

    Software Carpentry Workshop https://tess.elixir-europe.org/events/software-carpentry-workshop-ab3af408-aa91-49ed-bab2-5db1f2e6d15d Educators: Malvika Sharan, Georg Zeller, Mike Smith, Thomas Schwarzl, Frank Thommen (HD-HuB), Holger Dinkel Date: 16-10-2019 - 18-10-2019 09:00-18:00 Location: ATC Computer Training Lab, EMBL Heidelberg Contents: Computation is an integral part of today's research as data has grown too large or too complex to be analysed by hand. An ever-growing fraction of science is performed computationally and many wet-lab biologists spend part of their time on the computer. Many scientists struggle with this aspect of research as they have not been properly trained in the necessary set of skills. The result is that too much time is spent using inefficient tools when progress could be faster. This course provides training in several key tools, with a focus on good development practices that encourage efficient and reproducible research computing. Topics covered include: Introduction to Python scripting Introduction to the Unix shell and usage of cluster resources Version control with Git and Github Analysis pipeline management Scientific Python & working with biological data Literate programming with Jupyter notebooks Learning goals: This course aims to teach software writing skills and best practices to researchers in biology who wish to analyse data, and to introduce a toolset that can help them in their work. The goal is to enable them to be more productive and to make their science better and more reproducible. Prerequisites: This is a course for researchers in the life sciences who are using computers for their analyses, even if not full time. The target student will be familiar with some command line/programmatic computer usage, will want to become more confident using these tools efficiently and reproducibly. A target student will have written a for loop in some language before, but will not know what git is (or at least not be very comfortable using git). Keywords: Programming; Command Line; Version Control; Bioinformatics; Data Analysis; Cluster Computing Tools: Python; Bash; Unix/Linux; Git; GitHub; SnakeMake; Biopython; Pandas; Numpy; SciPy; Matplotlib 2019-10-16 09:00:00 UTC 2019-10-18 17:00:00 UTC de.NBI / ELIXIR Heidelberg, Heidelberg, Germany Heidelberg Heidelberg Karlsruhe Germany [] [] [] workshops_and_courses [] []
  • SPHN Data Privacy and IT Security Training

    25 October 2019

    Lausanne, Switzerland

    Elixir node event
    SPHN Data Privacy and IT Security Training https://tess.elixir-europe.org/events/sphn-data-privacy-and-it-security-training-45f9b664-6a6d-4fd1-bcad-c2201297c947 Overview Within the Swiss Personalized Health Network (SPHN) and related national initiatives researchers use patient data (i.e., confidential human data) in their research projects. 2019-10-25 09:00:00 UTC 2019-10-25 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Machine Learning in R

    6 - 7 November 2019

    Heidelberg, Germany

    Machine Learning in R https://tess.elixir-europe.org/events/machine-learning-in-r Date Nov 6 - Nov 7 2019 Location EMBL Heidelberg Tutors and helpers - Dr. Malvika Sharan - Prof Bernd Bischl - Martin Binder - Giuseppe Casalicchio Affiliation: Ludwig-Maximilians-University Munich Course Information This two-day course, on the implementation of Machine Learning in R, using mlr package will be delivered as practical sessions on programming and data analysis. The main goal of mlr is to provide a unified interface for machine learning tasks as classification, regression, cluster analysis and survival analysis in R. Sessions will be driven by many practical exercises and case studies. Before this workshop, participants are expected to review the official material introducing the principle of Machine Learning (see the prerequisite). Course Content This 2-day course will cover hands-on sessions using `mlr` and other relevant packages. Daily schedule - 09:30-12:30 3h morning, 90 min Theory + 90 min Practical - 12:30-13:30 1h Lunchbreak - 13:30-16:30 3h afternoon, 90 min Theory + 90 min Practical - 16:30-17:00 Time for general questions Day 1 Introduction to the concepts and Practical with mlr - Performance Evaluation and Resampling (Metrics, CV, ROC) - Introduction to Boosting Day 2 Introduction to the concepts and Practical with mlr - Tuning and Nested Cross-Validation - Regularization and Feature Selection Prerequisite The course is aimed at advanced R programmers, preferably with some knowledge of statistics and data modeling (See prerequisite materials from Day-1, 2, & 4). In this course, our learners will learn more about machine learning and its application and implementation through the hands-on sessions and use cases. Optional: Discussion-Based Session On The Principle of Machine Learning Anna Kreshuk (EMBL Group Leader) will lead a one-day discussion-based session on 14 October 2019 to address your questions on the prerequisite materials on the principle of Machine Learning. This will also allow you to connect with other participants of this workshop informally, and discuss the materials in smaller groups. Please register for this workshop separately: https://bio-it.embl.de/events/machine-learning-discussion-workshop-2019/. Registration Please register on this page: https://bio-it.embl.de/events/machine-learning-in-r-2019/ Please note that the maximum capacity of this course is 40 participants and registration is required to secure a place. If you have any questions, please contact Malvika Sharan. In your registration, please mention your EMBL group name, or institute's name (e.g. DKFZ, Uni-HD) if you are registering as an external participant. Costs 60,00 EUR Keywords: Machine Learning, R 2019-11-06 09:00:00 UTC 2019-11-07 17:00:00 UTC de.NBI Heidelberg, Heidelberg, Germany Heidelberg Heidelberg Karlsruhe Germany [] [] [] workshops_and_courses [] []
  • Nanopore day, Heidelberg

    7 November 2019

    Heidelberg, Germany

    Elixir node event
    Nanopore day, Heidelberg https://tess.elixir-europe.org/events/nanopore-day-heidelberg Hear about the latest tech updates for Oxford Nanopore as well as hearing from local users about their latest work using nanopore technology. There is no delegate fee for this event. Your place at this event will be confirmed via email from events@nanoporetech.com. Completion of this form does not constitute confirmation. Spaces are limited and will be allocated on a first-come, first-served basis. 2019-11-07 09:00:00 UTC 2019-11-07 17:00:00 UTC Oxford Nanopore Technology EMBL Heidelberg, 1, Meyerhofstraße, Heidelberg, Germany EMBL Heidelberg, 1, Meyerhofstraße Heidelberg Karlsruhe Germany [] [] [] meetings_and_conferences first_come_first_served Long read sequencing
  • NBIS Course: R programming for Life Scientists

    11 - 16 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: R programming for Life Scientists https://tess.elixir-europe.org/events/nbis-course-pre-r-programming-for-life-scientists More information will follow contact: education@nbis.se 2019-11-11 09:00:00 UTC 2019-11-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • NBIS Course: R programming for Life Scientists

    11 - 16 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: R programming for Life Scientists https://tess.elixir-europe.org/events/nbis-course-r-programming-for-life-scientists #training #url: https://nbisweden.github.io/workshop-r-1911/ 2019-11-11 - 2019-11-15, Course | Uppsala R programming foundations for Life Science Links: Course: https://nbisweden.github.io/workshop-r-1911/ Registration form: https://squery.typeform.com/to/XMwVk1  The course covers fundamental concepts of programming and software design focusing on programming in R. We will go through various aspects of R scripting emphasizing the parts useful for life scientists. After introductory lectures on good programming practices, basic software design theory and a brief overview of R, we will delve into programming. We will give you tools to access help and information on R-related challenges and issues, spend some time learning how to install external packages, how to find bugs and address common installation issues. The course will be given by experienced computational biologists from SciLifeLab and Uppsala University. Important dates:  application deadline -- October 20,  acceptance notification — October 25. contact: education@nbis.se 2019-11-11 09:00:00 UTC 2019-11-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • Translational Medicine Explained course

    11 - 15 November 2019

    Barcelona, Spain

    Elixir node event
    Translational Medicine Explained course https://tess.elixir-europe.org/events/translational-medicine-explained-course Interested in discovering the landscape of Translational Medicine? Want to learn about the job profiles of scientists in Industry? Then join the 2019 Winter school “Translational Medicine Explained (TMex)” which will be held in the beautiful Palau Macaya in Barcelona from… The post Translational Medicine Explained course appeared first on Dutch Techcentre for Life Sciences. 2019-11-11 09:00:00 UTC 2019-11-15 00:00:00 UTC Barcelona, Spain, Barcelona, Spain Barcelona, Spain Barcelona Spain [] [] [] workshops_and_courses [] []
  • NBIS Course: R programming for Life Scientists

    11 - 16 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: R programming for Life Scientists https://tess.elixir-europe.org/events/nbis-course-r-programming-for-life-scientists-0f47ae33-6003-48ab-b642-c11efbe7fd19 #training #url: https://www.scilifelab.se/events/r-foundations-for-life-scientists/  #url: https://nbisweden.github.io/workshop-r-1911/ 2019-11-11 - 2019-11-15, Course | Uppsala R programming foundations for Life Science Links: Course: https://nbisweden.github.io/workshop-r-1911/ Registration form: https://squery.typeform.com/to/XMwVk1  The course covers fundamental concepts of programming and software design focusing on programming in R. We will go through various aspects of R scripting emphasizing the parts useful for life scientists. After introductory lectures on good programming practices, basic software design theory and a brief overview of R, we will delve into programming. We will give you tools to access help and information on R-related challenges and issues, spend some time learning how to install external packages, how to find bugs and address common installation issues. The course will be given by experienced computational biologists from SciLifeLab and Uppsala University. Important dates:  application deadline -- October 20,  acceptance notification — October 25. contact: education@nbis.se 2019-11-11 09:00:00 UTC 2019-11-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • Basic statistics in R - Leuven

    18 November - 2 December 2019

    Leuven, Belgium

    Elixir node event
    Basic statistics in R - Leuven https://tess.elixir-europe.org/events/basic-statistics-in-r-leuven Get an idea of what R and Rstudio is Use R to handle data: creating, reading, reformatting and writing data Use R to create graphics Use basic statistical techniques in R : normality tests, t-tests, wilcoxon tests, chi square tests, correlations, survival analysis... Write and use R scripts 2019-11-18 09:00:00 UTC 2019-12-02 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Genome Engineering

    19 November 2019

    Leuven, Belgium

    Elixir node event
    Genome Engineering https://tess.elixir-europe.org/events/genome-engineering 2019-11-19 09:00:00 UTC 2019-11-19 00:00:00 UTC VIB Bioinformatics Core Provinciehuis Vlaams-Brabant, Leuven, Belgium Provinciehuis Vlaams-Brabant Leuven Belgium 3010 [] [] [] [] [] []
  • NBIS Course: De novo Genome Assembly

    20 - 23 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: De novo Genome Assembly https://tess.elixir-europe.org/events/nbis-course-prel-de-novo-genome-assembly More information will follow, see https://www.scilifelab.se/education/courses%26training for questions: education@nbis.se 2019-11-20 09:00:00 UTC 2019-11-23 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Analysis of 16S rRNA metagenomic experiments

    25 November 2019

    Leuven, Belgium

    Elixir node event
    Analysis of 16S rRNA metagenomic experiments https://tess.elixir-europe.org/events/analysis-of-16s-rrna-metagenomic-experiments Processing and statistical analysis of 16S rRNA metagenomic experiments using R & Lotus pipeline. The following analytical steps from raw data to communicable results will be on the programme: - Preparation of sequencing data, read filtering, data cleaning - Data normalization - Numerical ecology: Clustering, Ordination, Diversity, Modelling - Univariate & Multivariate Statistics - Biological interpretation 2019-11-25 09:00:00 UTC 2019-11-25 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Advances in Computational Biology Conference 2019

    28 - 29 November 2019

    Barcelona, Spain

    Elixir node event
    Advances in Computational Biology Conference 2019 https://tess.elixir-europe.org/events/advances-in-computational-biology-conference-2019 The first **Advances in Computational Biology conference – _Fostering collaboration among women scientists_** will bring together researchers working on systems biology, omics technologies, artificial intelligence and high-performance computing with applications to biology from both the public and private sectors. One of the main purposes of the conference is to **visualize and promote the research done by women scientists** and for this reason, all presenters will be women, although the conference is open to everyone. We want to create a space to foster collaborations between scientists, providing an excellent opportunity to share ideas and build research networks. Topics included: - **Learning from Biological Sequences**: population genomics, evolutionary genomics, systems biology, transcriptomics, sequence analysis - **When Computational Biology meets Medicine**: biomedical applications, mutational landscapes, clinical genomics - **Machines Speeding up Research**: high performance computing, machine learning in the life sciences, imaging data analysis, dynamic simulations and algorithm development Key dates: - Open registration: May 6th, 2019 - Abstract submission opens: May 6th, 2019 - **Abstract submission deadline: July 1st, 2019** - Early bird registration deadline: September 15th, 2019 - Registration deadline: November 1st, 2019 - AdvCompBio Conference: November 28th - 29th, 2019 The programme will include poster and oral presentations, as well as keynotes from leading scientists in the computational biology and high-performance computing fields. The keynote speakers of the conference are: **Christine Orengo**, group leader of Orengo Group at University College London, **Natasa Przulj**, group leader of the Life Sciences – Integrative Computational Network Biology at the Barcelona Supercomputing Center and **Marie-Christine Sawley**, director of the Exascale Lab at Intel. The confirmed chairs of the conference are: **Alison Kennedy**, director of the STFC Hartree Centre, **Janet Kelso**, group leader of the Minerva Research Group for Bioinformatics at the Max Planck Institute for Evolutionary Anthropology, and **Nuria Lopez-Bigas**, leader of the Biomedical Genomics Research Group at the Institute for Research in Biomedicine Barcelona. Furthermore, the participants will have the opportunity to interact personally with female leaders in the fields of IT, academic research and politics that support the conference. The conference is organised by the Bioinfo4Women programme from the Barcelona Supercomputing Center (BSC-CNS) with the collaboration of IMIM-UPF Research Programme on Biomedical Informatics (GRIB), the Spanish National Bioinformatics Institute (INB/ELIXIR-ES) and the Universitat Politècnica de Catalunya (UPC). It is an affiliate conference of the International Society for Computational Biology (ISCB). 2019-11-28 09:00:00 UTC 2019-11-29 17:00:00 UTC La Pedrera, 92, Passeig de Gràcia, Barcelona, Spain La Pedrera, 92, Passeig de Gràcia Barcelona Barcelona Spain Imaging Machine learning Computational biology Computer science Biomedical science Sequence analysis Transcriptomics Evolutionary biology Population genomics Omics Systems biology Bioinformatics [] [] ResearchersPhD studentsPostdoctoral studentsComputer scienceComputational biologistsbioinformaticians meetings_and_conferences [] HPCBioinformaticsComputational BiologyArtificial IntelligenceGenomicsTranscriptomicsSystems biologyPopulation GenomicsEvolutinary genomicsSequence Analysisbiomedical applicationsmutational landscapesclinical genomicsImagingdynamic simulationsalgorithmsmachine learning
  • Data Management Plan

    28 - 29 November 2019

    Lausanne, Switzerland

    Elixir node event
    Data Management Plan https://tess.elixir-europe.org/events/data-management-plan-812edd6d-94f8-445e-9830-257ec0790d90 NEW course date: 28-29 November 2019 Overview Recent studies have shown that worldwide, between 51% and 89% of published life sciences research is not reproducible, with consequent losses estimated at around $100 billions/year in biomedical research 2019-11-28 09:00:00 UTC 2019-11-29 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • CABANA Workshop: Analysis of Crop Genomics Data

    2 - 6 December 2019

    Bogota, Colombia

    Elixir node event
    CABANA Workshop: Analysis of Crop Genomics Data https://tess.elixir-europe.org/events/cabana-workshop-analysis-of-crop-genomics-data This course will introduce crop biologists to methods and approaches for analysing crop genomics data. 2019-12-02 08:30:00 UTC 2019-12-06 12:45:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Marco Cristancho [] [] [] [] HDRUK
  • Advanced R Shiny

    3 December 2019

    Lausanne, Switzerland

    Elixir node event
    Advanced R Shiny https://tess.elixir-europe.org/events/advanced-r-shiny-a89ad51d-0f85-4fbb-9dc3-fc055b677e84 Overview Shiny is the leading R package for developing interactive web apps. These give your clients, users, or students the power and sophistication of R with a friendly, no-code interface custom designed to your purpose. 2019-12-03 09:00:00 UTC 2019-12-03 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First steps with Git for reproducible research (date to be confirmed)

    5 December 2019

    Lausanne, Switzerland

    Elixir node event
    First steps with Git for reproducible research (date to be confirmed) https://tess.elixir-europe.org/events/first-steps-with-git-for-reproducible-research More information soon 2019-12-05 09:00:00 UTC 2019-12-05 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • High Performance Computing (HPC) in Life Sciences: Vital-IT Infrastructure Training

    12 December 2019

    Lausanne, Switzerland

    Elixir node event
    High Performance Computing (HPC) in Life Sciences: Vital-IT Infrastructure Training https://tess.elixir-europe.org/events/high-performance-computing-hpc-in-life-sciences-vital-it-infrastructure-training-7a057fe4-5717-4c6a-a567-ba2cb95bb755 Overview Several scientific applications require computing and/or storage resources that go beyond the processing power of a single multi-core machine. 2019-12-12 09:00:00 UTC 2019-12-12 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Gentle hands-on introduction to Python programming

    9 - 10 January 2020

    Leuven, Belgium

    Elixir node event
    Gentle hands-on introduction to Python programming https://tess.elixir-europe.org/events/gentle-hands-on-introduction-to-python-programming-6124936d-cd9a-431f-b7de-2736a4c81e66 Learning the basics of Python programming: different variables, reading files, writing files, conditional statements Being able to write a basic Python script from scratch 2020-01-09 09:00:00 UTC 2020-01-10 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Introduction to the analysis of NGS data

    10 February 2020

    Leuven, Belgium

    Elixir node event
    Introduction to the analysis of NGS data https://tess.elixir-europe.org/events/introduction-to-the-analysis-of-ngs-data-29290307-aebd-49d0-89f9-bc31fe089b47 This training is an introduction to a series of trainings on the analysis of Next Generation Sequencing data. This training is intended for newbies to the field and will teach them all background knowledge required to successfully complete the advanced NGS analysis trainings. To this end the training will give an overview of: - The Illumina platform - NGS data formats and file handling - Quality control of NGS data - Assembly and mapping of NGS data - Supporting IT: Galaxy and GenePattern platform 2020-02-10 09:00:00 UTC 2020-02-10 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Applied Bioinformatics in Life Sciences (3rd edition)

    13 - 14 February 2020

    Leuven, Belgium

    Elixir node event
    Applied Bioinformatics in Life Sciences (3rd edition) https://tess.elixir-europe.org/events/applied-bioinformatics-in-life-sciences-3rd-edition Bioinformatics has quickly become an integral part of life sciences research by enabling innovative computational approaches in an increasingly data-dense environment. Inspired by the sold-out editions in 2016 and 2018, VIB (a non-profit life sciences research institute) is organizing this third edition to highlight recent developments in bioinformatics research, and to showcase its impact in medical, agricultural, and biotechnological research. Nationally and internationally renowned speakers will present recent scientific findings in applied bioinformatics. They will shed light on the future perspectives of their research in the following plenary sessions: - Microbial & plant genomics: from simple to complex - Structural bioinformatics and proteomics - Data integration, machine learning and networks - Single cell bioinformatics Besides an inspiring scientific program, conference participants will have ample networking opportunities during poster sessions and the conference dinner. ### Speaker line-up: - Roser Vento, Sanger Institute, UK - Klaus Mayer, Helmholtz Zentrum München, DE - Thijs Ettema, Wageningen University, NL - Rohit Pappu, Washington University, US - Patrick Aloy, Structural Bioinformatics Lab, IRB Barcelona, ES - Helen Parkinson, EMBL-EBI, UK - Nick Loman, University of Birmingham, UK - Daifeng Wang, Stony Brook University, US - Aedin Culhane, Dana-Farber Cancer Institute & Harvard TH Chan School of Public Health, US - Sushmita Roy, Dept. of Biostatistics and Medical Informatics, Wisconsin Institute for Discovery, University of Wisconsin, US - Olga Vitek, Northeastern University, US - Nikolai Slavov, Northeastern University, US - Evangelia Petsalaki, EMBL-EBI, UK - Ashley Lu, VIB-KU Leuven Center for Brain & Disease Research, BE - Sofia Forslund, Experimental and Clinical Research Centre (ECRC, a joint venture of the Max Delbrück Center for Molecular Medicine and the Charité University Hospital), DE - Laurent Gatto, De Duve Institute – UC Louvain, BE - Erik Garrison, UC Santa Cruz, US ### Travel Grants We offer 5 travel grants to international attendees, which will reimburse travel costs up to 400 Euros. Are you interested in attending ABLS20 and want to have a chance on a travel grant? Submit your motivation below by clicking on the 'Apply for a grant' button before 15 November. The organizing committee will notify you of your travel grant acceptance on 22 November 2019. No registration is needed before submitting a travel grant proposal. When you’re awarded with a travel grant you will receive a practical email containing the next steps. Note that being awarded a travel grant does not mean being registered for the conference. Scroll down to apply for your grant. 2020-02-13 08:00:00 UTC 2020-02-14 18:00:00 UTC VIB Provinciehuis Provincie Vlaams-Brabant Provincieplein 1 3010 Leuven Belgium, Leuven, Belgium Provinciehuis Provincie Vlaams-Brabant Provincieplein 1 3010 Leuven Belgium Leuven Belgium 3010 Genomics Bioinformatics Data integration and warehousing Machine learning VIBKU Leuven conferences@vib.be [] [] 250 meetings_and_conferences [] bioinformaticsgenomicsProteomicsData Integrationmachine learning
  • Hands on introduction to ChIP-seq and ATAC-seq analysis

    17 February 2020

    Leuven, Belgium

    Elixir node event
    Hands on introduction to ChIP-seq and ATAC-seq analysis https://tess.elixir-europe.org/events/hands-on-introduction-to-chip-seq-and-atac-seq-analysis The aim is to: have an understanding of the nature of ChIP-seq and ATAC-seq data perform a complete analysis workflow including QC, read mapping, visualization in a genome browser and peak-calling using command line and open source software for each each step  have an overview of possible downstream analyses perform a motif analysis with online web programs This training does not cover all methods available today. It does not aim at bringing users to a professional NGS analyst level but provides enough information to allow biologists understand what DNA sequencing practically is and to communicate with NGS experts for more in-depth needs. 2020-02-17 09:00:00 UTC 2020-02-17 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • First steps with Git for reproducible research

    27 February 2020

    Lausanne, Switzerland

    Elixir node event
    First steps with Git for reproducible research https://tess.elixir-europe.org/events/first-steps-with-git-for-reproducible-research-date-to-be-confirmed More information soon 2020-02-27 09:00:00 UTC 2020-02-27 00:00:00 UTC SIB, Lausanne, Switzerland SIB Lausanne Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
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