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9 events found

City: Bogota  or Ghent  or Hinxton 

  • CABANA Workshop: Applied bioinformatics, molecular epidemiology, and the SARS-CoV-2 Pandemic

    1 - 4 December 2020

    Hinxton, United Kingdom

    Elixir node event
    CABANA Workshop: Applied bioinformatics, molecular epidemiology, and the SARS-CoV-2 Pandemic https://tess.elixir-europe.org/events/cabana-workshop-applied-bioinformatics-molecular-epidemiology-and-the-sars-cov-2-pandemic This workshop will provide training on the use of bioinformatic tools for the design and analysis of SARS-CoV-2 sequences. 2020-12-01 08:45:00 UTC 2020-12-04 12:00:00 UTC Virtual, Hinxton, United Kingdom Virtual Hinxton United Kingdom CB10 1SD [] Piraveen Gopalasingam [] [] [] [] HDRUK
  • DDA and DIA proteomic analysis in Galaxy

    3 - 4 December 2020

    Ghent, Belgium

    Elixir node event
    DDA and DIA proteomic analysis in Galaxy https://tess.elixir-europe.org/events/label-free-proteomics-data-analysis-in-galaxy At the beginning of the course we will introduce you to the Galaxy platform and teach you how to perform basic tasks such as importing data, running tools, working with histories, creating workflows, and sharing your work.  Then, we will dive into proteomic analyses which are split up into two parts. First, we will use MaxQuant to analyze classical proteomic shotgun (label-free data dependent acquisition = DDA) data. MaxQuant is a standalone tool that enables peptide and protein identification as well as quantification.  In the second part we will perform a complete analysis workflow for data independent acquisition (DIA) data using a variety of open-source tools (including diapysef, OpenSwath, Pyprophet, MSstats). This includes generating a peptide library, refining the library and utilizing the library to identify and quantify peptides in DIA data.  2020-12-03 09:00:00 UTC 2020-12-04 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Introduction to Git & GitHub

    10 December 2020

    Ghent, Belgium

    Elixir node event
    Introduction to Git & GitHub https://tess.elixir-europe.org/events/introduction-to-git-github-tbc-autumn Get you started with Git from zero (note that if you already use Git, this workshop will be too basic for you). We'll work with GitHub (Desktop) and have a look into git on a command-line level.  Introduction, set-up & configurations Working locally: Create a repository, clone, edit, staging commits, commit & push Working with your history & logs Working in a project: Forking, branching & pull requests How to version control your code in Rstudio with GitHub 2020-12-10 09:00:00 UTC 2020-12-10 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Introduction to Protein Structure Analysis, winter session

    31 December 2020 - 19 March 2021

    Ghent, Belgium

    Elixir node event
    Introduction to Protein Structure Analysis, winter session https://tess.elixir-europe.org/events/introduction-to-protein-structure-analysis-winter-session Get to know the data generated from protein structure determination experiments (high-resolution NMR spectroscopy, X-ray crystallography, electron microscopy, ...) and where to get it. Display protein structure data and compare structures, through the use of Yasara. Create high-quality graphical representations of the structures. Calculate the effect of mutations on the stability of your protein. 2020-12-31 09:00:00 UTC 2021-03-19 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Single-cell RNA-seq analysis using R (Virtual)

    1 - 5 February 2021

    Hinxton, United Kingdom

    Elixir node event
    Single-cell RNA-seq analysis using R (Virtual) https://tess.elixir-europe.org/events/single-cell-rna-seq-analysis-using-r-virtual This course covers the analysis of scRNA-seq data using R and command line tools. Please note the delivery of this course has changed from face-to-face to virtual. 2021-02-01 09:45:00 UTC 2021-02-05 14:00:00 UTC Virtual, Hinxton, United Kingdom Virtual Hinxton United Kingdom CB10 1SD [] Meredith Willmott [] [] [] [] HDRUK
  • Next generation sequencing bioinformatics (Virtual)

    15 - 19 February 2021

    Hinxton, United Kingdom

    Elixir node event
    Next generation sequencing bioinformatics (Virtual) https://tess.elixir-europe.org/events/next-generation-sequencing-bioinformatics-virtual This course will provide an introduction to the technology, analysis workflows, tools and resources for next generation sequencing data analysis. Please note the format of this course has changed from face-to-face to virtual. 2021-02-15 09:30:00 UTC 2021-02-19 17:30:00 UTC Virtual, Hinxton, United Kingdom Virtual Hinxton United Kingdom CB10 1SD [] Marina Pujol [] [] [] [] HDRUK
  • Introduction to multiomics data integration and visualisation (Virtual)

    22 - 26 February 2021

    Hinxton, United Kingdom

    Elixir node event
    Introduction to multiomics data integration and visualisation (Virtual) https://tess.elixir-europe.org/events/introduction-to-multiomics-data-integration-and-visualisation-virtual Identify the challenges, strategies and resources for multiomics data integration using biological examples. Please note the delivery of this course has changed from face-to-face to virtual. 2021-02-22 09:00:00 UTC 2021-02-26 17:00:00 UTC Virtual, Hinxton, United Kingdom Virtual Hinxton United Kingdom CB10 1SD [] Meredith Willmott [] [] [] [] HDRUK
  • Introduction to RNA-seq and functional interpretation (Virtual)

    16 - 19 March 2021

    Hinxton, United Kingdom

    Elixir node event
    Introduction to RNA-seq and functional interpretation (Virtual) https://tess.elixir-europe.org/events/introduction-to-rna-seq-and-functional-interpretation-virtual Gain an introduction to the technology, data analysis, tools, and resources used in RNA sequencing and transcriptomics. Please note the delivery of this course has changed from face-to-face to virtual. 2021-03-16 09:00:00 UTC 2021-03-19 00:00:00 UTC Virtual, Hinxton, United Kingdom Virtual Hinxton United Kingdom CB10 1SD [] Meredith Willmott [] [] [] [] HDRUK
  • Single-cell RNA-seq analysis into interpretation (Virtual)

    26 - 30 April 2021

    Hinxton, United Kingdom

    Elixir node event
    Single-cell RNA-seq analysis into interpretation (Virtual) https://tess.elixir-europe.org/events/single-cell-rna-seq-analysis-into-interpretation-virtual EMBL-EBI plans to deliver the majority of its 2021 events face-to-face with a small number of virtual events. Please note that some events that are currently listed as ‘on-site’ might need to be delivered virtually, depending on the prevailing status of the pandemic at the time. More courses will be added to this programme as our plans develop further. 2021-04-26 09:00:00 UTC 2021-04-30 17:00:00 UTC Virtual, Hinxton, United Kingdom Virtual Hinxton United Kingdom CB10 1SD [] Meredith Willmott [] [] [] [] HDRUK

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