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12 events found

Scientific topics: Genomics 

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City: Bogota  or Gebze  or Seattle  or Oeiras  or Cape Town  or Zurich  or Prague 

  • Genetic Architecture of Complex Traits

    6 - 8 March 2012

    Oeiras, Portugal

    Genetic Architecture of Complex Traits https://tess.elixir-europe.org/events/genetic-architecture-of-complex-traits 2012-03-06 09:00:00 UTC 2012-03-08 00:00:00 UTC GTPB Instituto Gulbenkian de Ciência, Oeiras, Portugal Instituto Gulbenkian de Ciência Oeiras Portugal Genomics Bioinformatics [] [] [] workshops_and_courses [] []
  • Analysis of NGS data from non-model organisms

    5 - 7 June 2012

    Oeiras, Portugal

    Analysis of NGS data from non-model organisms https://tess.elixir-europe.org/events/analysis-of-ngs-data-from-non-model-organisms 2012-06-05 09:00:00 UTC 2012-06-07 00:00:00 UTC GTPB Instituto Gulbenkian de Ciência, Oeiras, Portugal Instituto Gulbenkian de Ciência Oeiras Portugal Genomics Bioinformatics [] [] [] workshops_and_courses [] []
  • BFG12

    19 - 21 June 2012

    Oeiras, Portugal

    BFG12 https://tess.elixir-europe.org/events/bfg12 2012-06-19 09:00:00 UTC 2012-06-21 00:00:00 UTC GTPB Instituto Gulbenkian de Ciência, Oeiras, Portugal Instituto Gulbenkian de Ciência Oeiras Portugal Genomics Bioinformatics [] [] [] workshops_and_courses [] []
  • FGED 15th International Conference: Translational Genomics

    21 - 23 June 2013

    Seattle, United States of America

    FGED 15th International Conference: Translational Genomics https://tess.elixir-europe.org/events/fged-15th-international-conference-translational-genomics 2013-06-21 09:00:00 UTC 2013-06-23 00:00:00 UTC FGED Society Seattle, United States of America Seattle United States of America Genomics [] [] [] meetings_and_conferences [] []
  • FGED 15th International Conference: Translational Genomics

    21 - 23 June 2013

    Seattle, United States of America

    FGED 15th International Conference: Translational Genomics https://tess.elixir-europe.org/events/fged-15th-international-conference-translational-genomics-86cabe4f-0e64-424e-a988-6af32d5864ab 2013-06-21 09:00:00 UTC 2013-06-23 00:00:00 UTC FGED Society Seattle, United States of America Seattle United States of America Genomics [] [] [] meetings_and_conferences [] []
  • Analysing Whole-Genome Shotgun Metagenomic Data

    27 - 28 June 2013

    Oeiras, Portugal

    Analysing Whole-Genome Shotgun Metagenomic Data https://tess.elixir-europe.org/events/analysing-whole-genome-shotgun-metagenomic-data 2013-06-27 01:00:00 UTC 2013-06-28 01:00:00 UTC GTPB Oeiras, Portugal Oeiras Portugal Genomics Bioinformatics [] [] [] workshops_and_courses [] []
  • CSDM13

    27 - 29 November 2013

    Oeiras, Portugal

    CSDM13 https://tess.elixir-europe.org/events/csdm13 2013-11-27 09:00:00 UTC 2013-11-29 00:00:00 UTC GTPB Oeiras, Portugal Oeiras Portugal Genomics Bioinformatics [] [] [] workshops_and_courses [] []
  • GACT15 - Genomic Architecture of Complex Traits

    28 September - 1 October 2015

    Oeiras, Portugal

    GACT15 - Genomic Architecture of Complex Traits https://tess.elixir-europe.org/events/gact15-genomic-architecture-of-complex-traits 2015-09-28 01:00:00 UTC 2015-10-01 01:00:00 UTC GTPB Oeiras, Portugal Oeiras Portugal Genomics Bioinformatics [] [] [] workshops_and_courses [] []
  • Bacterial cell division: Orchestrating the ring cycle

    14 - 17 September 2016

    Prague, Czech Republic

    Bacterial cell division: Orchestrating the ring cycle https://tess.elixir-europe.org/events/bacterial-cell-division-orchestrating-the-ring-cycle 2016-09-14 01:00:00 UTC 2016-09-17 01:00:00 UTC EMBO Prague, Czech Republic Prague Czech Republic Genomics [] [] [] workshops_and_courses [] []
  • Genome assembly and annotation course

    12 - 14 October 2016

    Prague, Czechia

    Elixir node event
    Genome assembly and annotation course https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course ELIXIR Genome assembly and annotation course, Oct 12-14 2016 at the IOCB, Prague, Czech Republic 2016-10-12 09:00:00 UTC 2016-10-14 17:00:00 UTC ELIXIR CZ, IOCB Prague Institute of Organic Chemistry and Biochemistry AS CR, 2, Flemingovo náměstí, Prague, Czechia Institute of Organic Chemistry and Biochemistry AS CR, 2, Flemingovo náměstí Prague Hlavní město Praha Czechia Genomics IOCB Prague [] life scientistsResearchersPhD students workshops_and_courses registration_of_interest genomicsassemblytrainingeLearningEeLP
  • PGDH17 Population Genetics and Demographic History: model-based approaches

    13 March 2017

    Oeiras, Portugal

    Elixir node event
    PGDH17 Population Genetics and Demographic History: model-based approaches https://tess.elixir-europe.org/events/pgdh17-population-genetics-and-demographic-history    IMPORTANT DATES for this Course    Deadline for applications: Mar 6th 2017 (New)    Course date: March 13th - March 17th 2017 Candidates with adequate profile will be accepted in the next 72 hours after the application until we reach 20 participants. Course description Genetic and genomic data are increasingly used by ecologists and evolutionary biologists in general. It has thus become important for many biologists with different levels of experience to produce and analyse genetic (and genomic) data. In this course we will take a practical approach to the analysis of genetic and genomic data, but we will also provide some of the theoretical background required to understand the outputs of the software used. This course will be organised so as to mix lectures where important notions are introduced with practicals where freely available software will be used. While this will not be the focus of the course, we will also introduce and discuss genealogical (coalescent-based) simulation methods and those based on forward-in-time simulations. Altogether this will allow to discuss the potentialities and limitations of the tools available to the community. In this five-day course we will introduce the main concepts that underlie many of the models that are frequently used in population genetics. We will focus on the importance of demographic history (e.g. effective sizes and migration patterns) in shaping genetic data. We will go through the basic notions that are central to population genetics, insisting particularly on the statistics used to measure genetic diversity and population differentiation. The course will also cover a short introduction to coalescent theory, Bayesian inference in population genetics and data simulation. We will also introduce two methods that have been recently developed to analyse genomic data. The PSMC of Li and Durbin reconstructs the demographic history of a species or population with the genome of a single individual. The Rehh package is an R implementation of the Extended Haplotype Homozygosity (EHH) test for selective sweeps and looks for signals of selection based on the analysis of genomic regions. Most theory will be put into practice in practical sessions, analyzing real and/or simulated datasets. In these sessions, we will look at measures of genetic diversity and differentiation and use methods to infer demographic history. We will learn how to perform coalescent simulations of genetic/genomic data (using SPAms and ms). We will also show how to simulated data for PSMC analyses. This will allow users to compare the PSMC obtained with real data to those obtained for the models they used. We will also look at how habitat fragmentation can be simulated using an in-house program. Some exercises will make use of R scripts (R being a freely available statistical program). Basic R knowledge is a pre-requisite but we will provide a short introduction to R. The R statistical package is a very powerful tool to analyse data outputs from many population genetics software, and can also be used to simulate genetic data under simple demographic scenarios. Course Pre-requisites Basic molecular population genetics and molecular ecology. Basic R knowldedge. Basic knowledge of genomic data. 2017-03-13 09:30:00 UTC 2017-03-13 09:30:00 UTC Pedro Fernandes Instituto Gulbenkian de Ciência, Oeiras, Portugal Instituto Gulbenkian de Ciência Oeiras Portugal 2781-901 Genomics Population genetics [] bicourses@igc.gulbenkian.pt [] [] 20 workshops_and_courses registration_of_interest []
  • Genome assembly and annotation course 3

    23 - 27 October 2017

    Oeiras, Portugal

    Elixir node event
    Genome assembly and annotation course 3 https://tess.elixir-europe.org/events/genome-assembly-and-annotation-course-3 ELIXIR Genome assembly and annotation course 3, Oct 23-27 2017 at the Gulbenkian Institute of Science, Oeiras, Portugal 2017-10-23 09:00:00 UTC 2017-10-27 17:00:00 UTC ELIXIR PT, Instituto Gulbenkian Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande, Oeiras, Portugal Instituto Gulbenkian de Ciência (IGC), 6, Rua Quinta Grande Oeiras Portugal Genomics Instituto Gulbenkian de Ciência [] life scientistsResearchersPhD students workshops_and_courses registration_of_interest genomics AssemblyTrainingeLearningEeLP
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