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  • High-thoughput Omics & Data Integration Workshop

    14 - 16 February 2013

    Barcelona, Spain

    High-thoughput Omics & Data Integration Workshop https://tess.elixir-europe.org/events/high-thoughput-omics-data-integration-workshop 2013-02-14 00:00:00 UTC 2013-02-16 00:00:00 UTC SeqAhead Hospital Duran i Reynals, Barcelona, Spain Hospital Duran i Reynals Barcelona Spain Bioinformatics [] [] [] workshops_and_courses [] NGSdataintegrationmethodologystatisticsEMBnet
  • Ensembl Browser Workshop – IGMM Edinburgh, Oct 2015

    20 October 2015

    Edinburgh, United Kingdom

    Elixir node event
    Ensembl Browser Workshop – IGMM Edinburgh, Oct 2015 https://tess.elixir-europe.org/events/ensembl-browser-workshop-igmm-edinburgh-oct-2015 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2015-10-20 09:00:00 UTC 2015-10-20 00:00:00 UTC Institute of Genetics and Molecular Medicine (IGMM), Edinburgh, United Kingdom Institute of Genetics and Molecular Medicine (IGMM) Edinburgh United Kingdom EH4 2XU [] Emily Perry [] [] [] [] HDRUK
  • NGS data analysis course, Pontificia Universidad Javeriana, Bogota, November 2015

    23 - 24 November 2015

    Bogota, Colombia

    Elixir node event
    NGS data analysis course, Pontificia Universidad Javeriana, Bogota, November 2015 https://tess.elixir-europe.org/events/ngs-data-analysis-course-pontificia-universidad-javeriana-bogota-november-2015 This course is organised for professionals in life sciences and biomedical sciences, preferably researchers or graduate students who are conducting or planning to conduct investigations that require the bioinformatic analysis of data from omics technologies of high throughput sequencing or next generation (NGS). 2015-11-23 16:15:00 UTC 2015-11-24 16:15:00 UTC Pontificia Universidad Javeriana, Bogota, Colombia Pontificia Universidad Javeriana Bogota Colombia [] Maria Bacadare Goitia [] [] [] [] HDRUK
  • Agrimetrics - Ensembl Workshop – Livestock Genomes

    8 March 2016

    Edinburgh, United Kingdom

    Elixir node event
    Agrimetrics - Ensembl Workshop – Livestock Genomes https://tess.elixir-europe.org/events/agrimetrics-ensembl-workshop-livestock-genomes Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation and comparative genomics data on livestock genomes, and mine these data with BioMart. 2016-03-08 09:30:00 UTC 2016-03-08 17:00:00 UTC Scotland's Rural College, Edinburgh, United Kingdom Scotland's Rural College Edinburgh United Kingdom EH9 3HG [] Emily Perry [] [] [] [] HDRUK
  • Ensembl Browser Workshop, CRG Barcelona, 25th May 2016

    25 May 2016

    Barcelona, Spain

    Elixir node event
    Ensembl Browser Workshop, CRG Barcelona, 25th May 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-crg-barcelona-25th-may-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2016-05-25 09:30:00 UTC 2016-05-25 09:30:00 UTC Centre for Genomic Regulation, Barcelona, Spain Centre for Genomic Regulation Barcelona Spain 08003 [] Helen Sparrow [] [] [] [] HDRUK
  • BioExcel: Workflow Training for Computational Biomolecular Research

    20 - 21 October 2016

    Barcelona, Spain

    Elixir node event
    BioExcel: Workflow Training for Computational Biomolecular Research https://tess.elixir-europe.org/events/bioexcel-workflow-training-for-computational-biomolecular-research-3ab3cc23-6baa-4ae1-a081-e36a492fb7f4 Complex scientific studies require elaborate software pipelines necessitating interconnection of different tools and sources of data. In some cases, the complexity of the pipeline forces the definition of process dependencies, especially when those processes can be launched asynchronously in High Performance Computing (HPC) systems. Workflow managers such as Galaxy, Apache Taverna, PyCOMPSs, KNIME or Copernicus can be used to tackle this particular issue. 2016-10-20 09:00:00 UTC 2016-10-21 18:00:00 UTC Barcelona Supercomputing Center, Barcelona, Spain Barcelona Supercomputing Center Barcelona Spain 08034 [] Charlotte Pearton [] [] [] [] HDRUK
  • Introduction to ChIP-seq Data Analysis and Visualisation using Ensembl

    22 - 23 November 2016

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to ChIP-seq Data Analysis and Visualisation using Ensembl https://tess.elixir-europe.org/events/introduction-to-chip-seq-data-analysis-and-visualisation-using-ensembl-c5601f3a-8122-4d5b-971e-99fb37c67592 Learn about the primary analysis of ChIP-seq data sets, and how to view regulatory data using the Ensembl genome browser 2016-11-22 09:00:00 UTC 2016-11-23 17:00:00 UTC University of Edinburgh, Edinburgh, United Kingdom University of Edinburgh Edinburgh United Kingdom EH8 9YL [] Bert Overduin [] [] [] [] HDRUK
  • ISCB NGS 2017: Accessing structural variation and population genomics data in Ensembl

    5 April 2017

    Barcelona, Spain

    Elixir node event
    ISCB NGS 2017: Accessing structural variation and population genomics data in Ensembl https://tess.elixir-europe.org/events/iscb-ngs-2017-accessing-structural-variation-and-population-genomics-data-in-ensembl Work with the Ensembl Outreach team to get hands-on experience accessing structural variation and population genomics data with the Ensembl genome browser and using the Variant Effect Predictor (VEP) 2017-04-05 10:00:00 UTC 2017-04-05 10:00:00 UTC Centre for Genomic Regulation, Barcelona, Spain Centre for Genomic Regulation Barcelona Spain 08003 [] Benjamin Moore [] [] [] [] HDRUK
  • PRACE HPC Workshop 2018 - Parallel computing in bioinformatics research

    30 May 2018

    Ljubljana, Slovenia

    Elixir node event
    PRACE HPC Workshop 2018 - Parallel computing in bioinformatics research https://tess.elixir-europe.org/events/prace-hpc-workshop-2018-parallel-computing-in-bioinformatics-research HPC PRACE workshop "Parallel computing in bioinformatics research", May 30, 2018 at the HPC PraceDays2018, Ljubljana, Slovenia 2018-05-30 14:00:00 UTC 2018-05-30 16:30:00 UTC PRACE Faculty of Law, University of Ljubljana, Poljanski nasip 2, Ljubljana, Slovenia Faculty of Law, University of Ljubljana, Poljanski nasip 2 Ljubljana Slovenia Comparative genomics University of Ljubljana, Faculty of Law [] life scientistsResearchers 30 workshops_and_courses registration_of_interest comparative genomicshigh-performance computingtrainingeLearningEeLP
  • CABANA Train the Trainer Workshop

    15 - 16 November 2018

    Bogota, Colombia

    Elixir node event
    CABANA Train the Trainer Workshop https://tess.elixir-europe.org/events/cabana-train-the-trainer-workshop This course will provide new trainers with knowledge, skills, guidance and tips for developing and delivering training. 2018-11-15 09:30:00 UTC 2018-11-16 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Alejandro Reyes [] [] [] [] HDRUK
  • CABANA Workshop: Untapping diversity through Metagenomics: An Introductory Workshop

    3 - 6 December 2018

    Bogota, Colombia

    Elixir node event
    CABANA Workshop: Untapping diversity through Metagenomics: An Introductory Workshop https://tess.elixir-europe.org/events/cabana-workshop-untapping-diversity-through-metagenomics-an-introductory-workshop In this course participants will learn the basics of metagenomics, covering experimental design and workflows, moving through to microbiome analysis via amplicon sequencing and shotgun metagenomics. 2018-12-03 08:30:00 UTC 2018-12-06 17:30:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Alejandro Reyes [] [] [] [] HDRUK
  • Ensembl Browser Workshop, Bogota, 11 February 2019

    11 February 2019

    Bogota, Colombia

    Elixir node event
    Ensembl Browser Workshop, Bogota, 11 February 2019 https://tess.elixir-europe.org/events/ensembl-browser-workshop-bogota-11-february-2019 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2019-02-11 09:00:00 UTC 2019-02-11 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] HDRUK
  • Ensembl REST API Workshop, Bogota, 12 February 2019

    12 February 2019

    Bogota, Colombia

    Elixir node event
    Ensembl REST API Workshop, Bogota, 12 February 2019 https://tess.elixir-europe.org/events/ensembl-rest-api-workshop-bogota-12-february-2019 Work with Ensembl to master the Ensembl REST APIs and flexibly access genome-wide data, such as genes, variants, regulatory features, homologues and alignments. 2019-02-12 09:00:00 UTC 2019-02-12 15:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] HDRUK
  • Introduction to Python for Biologists

    8 - 12 July 2019

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to Python for Biologists https://tess.elixir-europe.org/events/introduction-to-python-for-biologists-d98f6dfb-45c5-4377-bbe9-9e8d30ed086d Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. This workshop is aimed at complete beginners and assumes no prior programming experience. It gives an overview of the language with an emphasis on practical problem-solving, using examples and exercises drawn from various aspects of bioinformatics work. The workshop is structured so that the parts of the language most useful for bioinformatics are introduced as early as possible, and that students can start writing plausibly-useful programs after the first few sessions. After completing the workshop, students should be in a position to (1) apply the skills they have learned to tackling problems in their own research and (2) continue their Python education in a self-directed way. 2019-07-08 09:00:00 UTC 2019-07-12 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN Genomics Bioinformatics Edinburgh Genomics Training Team - edge-training@ed.ac.uk [] [] workshops_and_courses [] HDRUK
  • Bioinformatics Workflows with Snakemake

    30 September - 1 October 2019

    Edinburgh, United Kingdom

    Elixir node event
    Bioinformatics Workflows with Snakemake https://tess.elixir-europe.org/events/bioinformatics-workflows-with-snakemake Researchers needing to implement data analysis workflows face a number of common challenges, including the need to organise their tasks, make effective use of compute resources, handle unexpected errors in processing, and document and share their methods. The Snakemake workflow system provides effective solutions to these problems. By the end of the course, you will be confident in using Snakemake to tackle complex workflow problems and in your day-to-day research. 2019-09-30 09:00:00 UTC 2019-10-01 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3FL Workflows Genomics Bioinformatics Edinburgh Genomics Edinburgh Genomics Training Team - edge-training@ed.ac.uk [] [] workshops_and_courses [] HDRUK
  • Ensembl Browser Workshop, IGMM, Edinburgh, 22 October 2019

    22 October 2019

    Edinburgh, United Kingdom

    Elixir node event
    Ensembl Browser Workshop, IGMM, Edinburgh, 22 October 2019 https://tess.elixir-europe.org/events/ensembl-browser-workshop-igmm-edinburgh-22-october-2019 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2019-10-22 09:00:00 UTC 2019-10-22 17:00:00 UTC Institute of Genetics and Molecular Medicine (IGMM), Edinburgh, United Kingdom Institute of Genetics and Molecular Medicine (IGMM) Edinburgh United Kingdom EH4 2XU [] Astrid Gall [] [] [] [] HDRUK
  • CABANA Workshop: Analysis of Crop Genomics Data

    2 - 6 December 2019

    Bogota, Colombia

    Elixir node event
    CABANA Workshop: Analysis of Crop Genomics Data https://tess.elixir-europe.org/events/cabana-workshop-analysis-of-crop-genomics-data This course will introduce crop biologists to methods and approaches for analysing crop genomics data. 2019-12-02 08:30:00 UTC 2019-12-06 12:45:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Marco Cristancho [] [] [] [] HDRUK
  • Introduction to RNA-seq Data Analysis

    17 - 19 February 2020

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to RNA-seq Data Analysis https://tess.elixir-europe.org/events/introduction-to-rna-seq-data-analysis-5989e86e-a408-481d-b3c7-5a1413b0e4a6 RNA sequencing (RNA-seq) is quickly becoming the method of choice for transcriptome profiling. Nevertheless, it is a non-trivial task to transform the vast amount of data obtained with high-throughput sequencers into useful information. Thus, RNA-seq data analysis is still a major bottleneck for most researchers in this field. The ability of correctly interpreting RNA-seq results, as well as knowledge on the intrinsic properties of these data, are essential to avoid incorrect experimental designs and the application of inappropriate analysis methodologies. The aim of this workshop is to familiarise researchers with RNA-seq data and to initiate them in the analysis by providing lectures and practicals on analysis methodologies. In the practicals Illumina-generated sequencing data and various widely used software programs will be used. 2020-02-17 09:00:00 UTC 2020-02-19 17:00:00 UTC Kings Buildings, The University of Edinburgh, Edinburgh, United Kingdom Kings Buildings, The University of Edinburgh Edinburgh United Kingdom EH25 9RG RNA-Seq Genomics Bioinformatics Edinburgh Genomics Edinburgh Genomics Training Team - edge-training@ed.ac.uk [] [] workshops_and_courses [] HDRUK
  • CABANA Workshop: Analysis of Crop Genomics Data

    16 - 20 March 2020

    Bogota, Colombia

    Elixir node event
    CABANA Workshop: Analysis of Crop Genomics Data https://tess.elixir-europe.org/events/cabana-workshop-analysis-of-crop-genomics-data-0d1c7271-613b-4672-bac5-19f641f9be70 This course will introduce crop biologists to methods and approaches for analysing crop genomics data. 2020-03-16 08:30:00 UTC 2020-03-20 12:30:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Marco Cristancho [] [] [] [] HDRUK

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