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4 events found

City: Bogota  or Edinburgh  or Ljubljana  or Barcelona  or Fisciano 

and

Keywords: high-performance computing  or NGS 

  • High-thoughput Omics & Data Integration Workshop

    14 - 16 February 2013

    Barcelona, Spain

    High-thoughput Omics & Data Integration Workshop https://tess.elixir-europe.org/events/high-thoughput-omics-data-integration-workshop 2013-02-14 00:00:00 UTC 2013-02-16 00:00:00 UTC SeqAhead Hospital Duran i Reynals, Barcelona, Spain Hospital Duran i Reynals Barcelona Spain Bioinformatics [] [] [] workshops_and_courses [] NGSdataintegrationmethodologystatisticsEMBnet
  • 3Gb-TEST NGS Course Ljubljana 2017

    25 - 27 September 2017

    Ljubljana, Slovenia

    3Gb-TEST NGS Course Ljubljana 2017 https://tess.elixir-europe.org/events/3gb-test-ngs-in-a-diagnostic-setting A 3-day course on NGS Ljubljana, Slovenia in the period of 25-27 September 2017. The focus of the course is on clinical diagnostics using exome/genome sequences, variant identification and analysis including afternoon practical sessions. 2017-09-25 08:00:00 UTC 2017-09-27 18:00:00 UTC 3Gb-TEST Best Western Premier Hotel Slon, Ljubljana, Slovenia Best Western Premier Hotel Slon Ljubljana Slovenia Sequencing Exome sequencing Sequence analysis [] J.A.Lopez_Hernandez@lumc.nl In collaboration with RD-Connect [] 100 workshops_and_courses registration_of_interest NGSDiagnosisWESWGSELSI
  • Training Course on Best practices for RNA-Seq data analysis

    27 - 29 September 2017

    Fisciano, Italy

    Training Course on Best practices for RNA-Seq data analysis https://tess.elixir-europe.org/events/training-course-on-best-practices-for-rna-seq-data-analysis Next-generation sequencing (NGS) of RNA libraries (RNA-Seq) has become increasingly common and it largely replaced microarray technology for gene expression profiling. The aim of this course is to get a deeper understanding of RNA-Seq experiments, providing a theoretical introduction to the data processing steps, together with practical sessions illustrating the use of the most popular data analysis tools. The classroom size is limited to 25 participants to optimize the learning and the interaction with the instructors. Starting from the raw sequenced data coming from different phenotypical samples (e.g disease vs healthy control samples), genes which are differentially expressed between the two conditions are determine. Some strategies are illustrated for detecting alternative splicing products, predicting novel isoforms and gene fusion events. Some methods for downstream analysis are described to give insight into how biological knowledge can be generated from RNA-Seq experiments. A lecture on single-cell RNA-Seq will provide an idea of how transcriptome data from individual cells is now emerging as a powerful tool, allowing the study of cell-to-cell gene expression heterogeneity in the same tissue. 2017-09-27 09:15:00 UTC 2017-09-29 16:30:00 UTC Anna Marabotti (University of Salerno and ELIXIR-IIB Training Team, Italy), Roberto Tagliaferri (University of Salerno, Italy), Alessandro Weisz (University of Salerno, Italy), Loredana Le Pera (ELIXIR-IIB Training Team and IIT, Italy), Allegra Via (ELIXIR-IIB Training Coordinator, CNR-IBPM, Italy) Campus di Fisciano, Università degli Studi di Salerno, Via Giovanni Paolo II, n. 132, Fisciano, Italy Campus di Fisciano, Università degli Studi di Salerno, Via Giovanni Paolo II, n. 132 Fisciano Provincia di Salerno Italy 84084 Transcriptomics RNA splicing Sequencing Bioinformatics RNA-Seq Gene expression Campus di Fisciano, University of Salerno, Italy elixir.ita.training@gmail.com, amarabotti@unisa.it ELIXIR Italy PhD students and young researchers in the life science and computational biology field who are planning to use RNA-seq data and are looking for the best practices to analyze these types of data 25 workshops_and_courses first_come_first_servedregistration_of_interest NGSRNA-SeqBioinformaticsData analysisHigh Throughput Sequencing AnalysisGene Expression
  • PRACE HPC Workshop 2018 - Parallel computing in bioinformatics research

    30 May 2018

    Ljubljana, Slovenia

    Elixir node event
    PRACE HPC Workshop 2018 - Parallel computing in bioinformatics research https://tess.elixir-europe.org/events/prace-hpc-workshop-2018-parallel-computing-in-bioinformatics-research HPC PRACE workshop "Parallel computing in bioinformatics research", May 30, 2018 at the HPC PraceDays2018, Ljubljana, Slovenia 2018-05-30 14:00:00 UTC 2018-05-30 16:30:00 UTC PRACE Faculty of Law, University of Ljubljana, Poljanski nasip 2, Ljubljana, Slovenia Faculty of Law, University of Ljubljana, Poljanski nasip 2 Ljubljana Slovenia Comparative genomics University of Ljubljana, Faculty of Law [] life scientistsResearchers 30 workshops_and_courses registration_of_interest comparative genomicshigh-performance computingtrainingeLearningEeLP

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