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  • Deep learning for digital pathology image analysis (lectures only)

    14 March 2019

    Basel, Switzerland

    Elixir node event
    Deep learning for digital pathology image analysis (lectures only) https://tess.elixir-europe.org/events/deep-learning-for-digital-pathology-image-analysis-lectures-only This course is now over-subscribed with a waiting list. 2019-03-14 09:00:00 UTC 2019-03-14 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Best practices in HPC (sciCORE cluster)

    27 March 2019

    Basel, Switzerland

    Elixir node event
    Best practices in HPC (sciCORE cluster) https://tess.elixir-europe.org/events/best-practices-in-hpc-scicore-cluster Overview This one-day course is a follow-up to the sciCORE course "Introduction to HPC (sciCORE cluster)". 2019-03-27 09:00:00 UTC 2019-03-27 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • SPHN Data Privacy and IT Security Training

    2 April 2019

    Basel, Switzerland

    Elixir node event
    SPHN Data Privacy and IT Security Training https://tess.elixir-europe.org/events/sphn-data-privacy-and-it-security-training-df60adc9-02da-4152-a56d-f3d5fa73078d Overview Within the Swiss Personalized Health Network (SPHN) and related national initiatives researchers use patient data (i.e., confidential human data) in their research projects. 2019-04-02 09:00:00 UTC 2019-04-02 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps in Parallelization with OpenMP

    8 May 2019

    Basel, Switzerland

    Elixir node event
    First Steps in Parallelization with OpenMP https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp-1bbfd630-8e6e-424b-93c3-692f1df61027 Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. In order to benefit from this computational power we need to devise programs explicitly written for parallel machines. 2019-05-08 09:00:00 UTC 2019-05-08 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • ELIXIR-EXCELERATE Train the trainer

    8 - 10 May 2019

    Basel, Switzerland

    Elixir node event
    ELIXIR-EXCELERATE Train the trainer https://tess.elixir-europe.org/events/elixir-excelerate-train-the-trainer-7b9d0389-490f-46f6-89af-697c998d655e ELIXIR-EXCELERATE is funded by the European Commission within the Research Infrastructures programme of Horizon 2020, grant agreement number 676559 Overview This course offers guidance, ideas and tips for designing training/teaching, 2019-05-08 09:00:00 UTC 2019-05-10 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Course: RNAseq

    13 - 16 May 2019

    Uppsala, Sweden

    Elixir node event
    Course: RNAseq https://tess.elixir-europe.org/events/course-rnaseq https://www.scilifelab.se/events/rna-seq-data-analysis-2/ 2019-05-13 09:00:00 UTC 2019-05-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Course: Genome Annotation

    15 - 18 May 2019

    Uppsala, Sweden

    Elixir node event
    Course: Genome Annotation https://tess.elixir-europe.org/events/course-genome-annotation https://www.scilifelab.se/events/introduction-to-genome-annotation/ 2019-05-15 09:00:00 UTC 2019-05-18 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Course: Biostatistics Essentials: a blackboard approach

    21 - 24 May 2019

    Uppsala, Sweden

    Elixir node event
    Course: Biostatistics Essentials: a blackboard approach https://tess.elixir-europe.org/events/course-biostatistics-essentials-a-blackboard-approach Course name: Biostatistics Essentials: a blackboard approach Course dates: 2019-05-21 and 2019-05-23 Course location: SciLifeLab, Uppsala University, BMC, Husargatan 3 Please apply here: https://goo.gl/forms/6aIQ4BFIrGDJ9cL92 ------------------------------------------------ National course open for PhD students, postdocs, researchers and other employees in need of biostatistical skills within all Swedish universities. The course is geared towards life scientists wanting to be able to understand and use basic statistical methods. It would also suit those already applying biostatistical methods but have never got a chance to reflect on and truly grasp the basic statistical concepts, such as the commonly misinterpreted p-value! Important date Application opens: now Application closes: 2019-03-31 Confirmation to accepted students: 2019-04-16 Responsible teachers: Olga Dethlefsen, Eva Freyhult If you do not receive information according to the above dates please contact olga.dethlefsen@nbis.se, eva.freyhult@nbis.se Course content ●Basic statistical theory and concepts incl. stochastic variables, density and distribution functions, central limit theorem, confidence intervals ●Hypothesis testing ●Resampling ●Linear and logistic regression methods ●Model selection and regularization ●Unsupervised learning, incl. clustering and dimension reduction methods Education In this course we focus on active learning approach. The course participants are expected to do some pre-course reading and exercises, corresponding up to 16h studying. The education consists of teaching blocks alternating between mini-lectures, group discussions, live coding sessions etc. A special focus is put on understanding basic concepts by solving problems with pen and paper. We believe in less-is-more principle, so be ready to say no to digital exhaustion to truly learn something with our modern “blackboard approach”. Literature ●An Introduction to Statistical Learning, Gareth James, Daniela Witten, Trevor Hastie and Robert Tibshirani (.pdf freely available) ●Additional teachers’ choice Entry requirements ●No prior knowledge is assumed ●BYOL (bring your own laptop) with R and RStudio installed ●Prior experience using R and RStudio is welcome; pre-course exercises will be available for those new to R/RStudio Due to limited space the course can accommodate maximum of 25 participants. If we receive more applications, participants will be selected based on several criteria. Selection criteria include correct entry requirements, motivation to attend the course as well as gender and geographical balance. Course fee A course fee* of 1700 SEK will be invoiced to accepted participants. The fee includes lunches, coffee and snacks. *Please note that NBIS cannot invoice individuals 2019-05-21 09:00:00 UTC 2019-05-24 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Introduction to high-performance computing (sciCORE cluster)

    19 June 2019

    Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-cac27254-dfeb-42a0-a82c-1ae2209b38c4 Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2019-06-19 09:00:00 UTC 2019-06-19 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Tools for reproducible research - ISMB/ECCB 2019

    21 July 2019

    Basel, Switzerland

    Tools for reproducible research - ISMB/ECCB 2019 https://tess.elixir-europe.org/events/tools-for-reproducible-research-0ed30b48-9c67-48f5-8616-6ca21c78c509 Educators: Bjoern Grüning (RBC), Johannes Köster, Devon Ryan Date: 21.07.2019 Location: ISMB/ECCB Basel Content: The typical data analyst must simultaneously juggle multiple projects, each having its own duration and software requirements. As few analysts have any formal training on structuring or even writing the code necessary to perform an analysis, it is unsurprising that the iterative analytic process can produce a wide assortment of almost identically named files (e.g., “final_results.txt”, “final_results.version2.txt”, “final_results.really_final.txt”), all with unclear origins and produced with a hodge-podge of similarly poorly named scripts. The near impossibility of tracing a results file to the exact process that produced it creates untold difficulties both when it comes time to publish results as well as when planning subsequent experiments months or years later (afterall, which of the “final_results” files was really the “right one”?). These issues are further compounded by software paths and other similar assumptions being hard-coded into scripts, preventing easy analysis replication elsewhere. Performing analyses in a reproducible and traceable manner is clearly needed to combat such problems. Schedule Overview 2:00 - 2:10 pm Installing conda and snakeMake 2:10 - 2:30 pm Intro to conda and bioconda (slides) 2:30 - 3:30 pm Hands-on Session: creating conda envs and installing packages from bioconda repo This practical would require installing hisat, samtools and deeptools via bioconda 3:30 - 4:00 pm Hands-on Session: writing conda recipes Topics in BioVis (including examples) Visualization of sequences, macromolecules, omics data, biological networks 4:00 - 4:15 am Coffee Break 4:15 - 4:35 pm Intro to snakemake Specific tools for visualizing large-scale biological data 4:35 - 6:00 Hands On Session: Writing a snakemake workflow wrapper for mapping, indexing and creating coverage files Learning goals: In this hands-on tutorial, we demonstrate how Conda can be used to deploy specific software versions easily, reproducibly, and without administrator credentials. Moreover, we demonstrate how Conda’s ability to create isolated software environments helps to avoid side-effects between different analyses or different steps of the same analysis. Attendees will also learn how to create conda recipes themselves, so they can contribute new packages to projects such as Bioconda. We further demonstrate how Snakemake can be used in combination with Conda and Containers to create reproducible analysis workflows and execute them on any platform from workstations to clusters and the cloud. Finally, using snakePipes as an example, we demonstrate how Conda and Snakemake can be used to define reproducible and flexible workflows for complex genomics analysis. Prerequisites: - Laptops with Linux or MacOS - Pre-installed Miniconda - install via miniconda : https://conda.io/miniconda.html - Expected audience should have basic familiarity with python, git and the command line. Keywords: Conda, Bioconda, snakemake, Bioconductor, reproducible research Tools: Conda, Bioconda, snakemake, 2019-07-21 09:00:00 UTC 2019-07-21 17:00:00 UTC de.NBI Basel, Basel, Switzerland Basel Basel Basel-Stadt Switzerland [] [] [] meetings_and_conferences [] []
  • ISMB/ECCB 2019

    21 - 25 July 2019

    Basel, Switzerland

    ISMB/ECCB 2019 https://tess.elixir-europe.org/events/ismb-eccb-2019 ISMB/ECCB 2019 is the largest and most high profile annual meeting of scientists working in computational biology and provides an intense multidisciplinary forum for disseminating the latest developments in computational tools for data driven biological research. ELIXIR will be present at this year's ISMB/ECCB 2019 conference with three dedicated Tech Tracks on Monday 22 July and a Special Session on Scalable Plant-Research in Cloud Environments on Wednesday 24 July. ELIXIR will also be have a booth (booth numbers 23 and 24) in the exhibition area with information about our services including Global Alliance, Galaxy, Plants, TeSS and Beacons.  Further details about the conference, including how to register, can be found on the ISMB/ECCB 2019 website. 2019-07-21 10:00:00 UTC 2019-07-25 17:00:00 UTC Congress Center Basel, Basel, Switzerland Congress Center Basel Basel Switzerland 4058 [] [] [] meetings_and_conferences [] []
  • ELIXIR Beacons (at ISMB / ECCB)

    22 July 2019

    Basel, Switzerland

    ELIXIR Beacons (at ISMB / ECCB) https://tess.elixir-europe.org/events/elixir-beacons-at-ismb-eccb This workshop will demonstrate the Beacon API, a data discovery protocol that allows users to determine the presence or absence of a particular allele in a dataset, without disclosing any further data differentiating the individuals it contains. The ELIXIR Beacons project is a Driver Project of the Global Alliance for Genomics and Health that provides a simple way to federate data discoverability. The ELIXIR Beacons protocol can allows any variation data back end to be connected to the ELIXIR Beacons network which can then be queried to ask questions like _'does this dataset have any information about allele 'X' at position 'Y' in the genome?'_. This workshop will show how recent extensions to the Beacon API has extended its functionality by adding support for additional types of genomic variants and improved metadata support. Additionally we will also demonstrate the accompanying ELIXIR Beacon reference implementation which utilises risk mitigation strategies by integrating the ELIXIR Authorization and Authentication Infrastructure (AAI), demonstrating to data owners how to light Beacons at different tiers of data access: open, registered, or controlled. 2019-07-22 14:00:00 UTC 2019-07-22 16:00:00 UTC Gary Saunders Congress Center Basel, Basel, Switzerland Congress Center Basel Basel Switzerland [] Gary Saunders <gary.saunders@elixir-europe.org>, Frédéric Haziza <frederic.haziza@crg.eu> [] [] meetings_and_conferencesworkshops_and_courses [] beacon
  • NBIS course: Introduction to Bioinformatics using NGS data

    9 - 14 September 2019

    Uppsala, Sweden

    Elixir node event
    NBIS course: Introduction to Bioinformatics using NGS data https://tess.elixir-europe.org/events/nbis-course-introduction-to-bioinformatics-using-ngs-data #training #url: https://www.scilifelab.se/events/introduction-to-bioinformatics-using-ngs-data-uppsala-2/ 2019-09-09 09:00:00 UTC 2019-09-14 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Introduction to Bioinformatics using NGS data, Uppsala

    9 - 13 September 2019

    Uppsala, Sweden

    Elixir node event
    Introduction to Bioinformatics using NGS data, Uppsala https://tess.elixir-europe.org/events/introduction-to-bioinformatics-using-ngs-data-uppsala-b997ea28-3232-4b81-86ea-d071bc3516f6 #training #url: https://www.scilifelab.se/events/introduction-to-bioinformatics-using-ngs-data-uppsala-2/ 2019-09-09 09:00:00 UTC 2019-09-13 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] workshops_and_courses [] #trainingtraining
  • Introduction to Machine Learning

    9 September 2019

    Basel, Switzerland

    Introduction to Machine Learning https://tess.elixir-europe.org/events/introduction-to-machine-learning Machine learning has emerged as a discipline that enables computers to assist humans in making sense of large and complex data sets. With the drop-in cost of sequencing technologies, large amounts of omics data are being generated and made accessible to researchers. Analysing these complex high-volume data is not trivial and the use of classical tools cannot explore their full potential. Machine learning can thus be very useful in mining large omics datasets to uncover new insights that can advance the field of medicine and improve health care. The aim of this tutorial is to introduce participants to the Machine learning (ML) taxonomy and common machine learning algorithms. The tutorial will cover the methods being used to analyse different omics data sets by providing a practical context through the use of basic but widely used R and Python libraries. The tutorial will comprise a number of hands on exercises and challenges, where the participants will acquire a first understanding of the standard ML processes as well as the practical skills in applying them on familiar problems and publicly available real-world data sets. 2019-09-09 09:00:00 UTC 2019-09-09 17:00:00 UTC ELIXIR-GR, H3ABioNet University of Basel Kollegienhaus Petersplatz 1 CH-4001 Basel, Basel, Switzerland University of Basel Kollegienhaus Petersplatz 1 CH-4001 Basel Basel Basel-Stadt Switzerland CH-4001 [] Fotis E. Psomopoulos (fpsom@certh.gr) [] [] 30 workshops_and_courses first_come_first_served bioinformaticsmachine learning
  • [BC]2 Basel Computational Biology Conference tutorial: Using the Ensembl REST APIs to programmatically access genomic data, 9 September 2019

    9 September 2019

    Basel, Switzerland

    Elixir node event
    [BC]2 Basel Computational Biology Conference tutorial: Using the Ensembl REST APIs to programmatically access genomic data, 9 September 2019 https://tess.elixir-europe.org/events/bc-2-basel-computational-biology-conference-tutorial-using-the-ensembl-rest-apis-to-programmatically-access-genomic-data-9-september-2019 Work with Ensembl to master the Ensembl REST API and flexibly access genome-wide data, such as genes, variants, regulatory features, homologues and alignments. 2019-09-09 09:00:00 UTC 2019-09-09 16:00:00 UTC University of Basel, Basel, Switzerland University of Basel Basel Switzerland 4001 [] Astrid Gall [] [] [] [] HDRUK
  • Ensembl Browser Workshop, George Washington University, 13th September 2019

    13 September 2019

    Washington, United States of America

    Elixir node event
    Ensembl Browser Workshop, George Washington University, 13th September 2019 https://tess.elixir-europe.org/events/ensembl-browser-workshop-george-washington-university-13th-september-2019 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2019-09-13 09:00:00 UTC 2019-09-13 09:00:00 UTC George Washington University, Washington, United States of America George Washington University Washington United States of America DC 20052 [] Benjamin Moore [] [] [] [] HDRUK
  • NBIS Course Uppsala: Python programming with applications to bioinformatics

    7 - 12 October 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course Uppsala: Python programming with applications to bioinformatics https://tess.elixir-europe.org/events/nbis-course-prel-python-programming-with-applications-to-bioinformatics #training #url: https://www.scilifelab.se/events/python-programming-with-applications-to-bioinformatics-uppsala/ Apply here: https://forms.gle/35KuAqxjXqvwaGG19 contact: education@nbis.se 2019-10-07 09:00:00 UTC 2019-10-12 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Python programming with applications to bioinformatics, Uppsala (NBIS/ELIXIR-SE course)

    7 - 11 October 2019

    Uppsala, Sweden

    Elixir node event
    Python programming with applications to bioinformatics, Uppsala (NBIS/ELIXIR-SE course) https://tess.elixir-europe.org/events/python-programming-with-applications-to-bioinformatics-uppsala #training #url: https://www.scilifelab.se/events/python-programming-with-applications-to-bioinformatics-uppsala/ Apply here: https://forms.gle/35KuAqxjXqvwaGG19 contact: education@nbis.se 2019-10-07 09:00:00 UTC 2019-10-11 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] workshops_and_courses [] #trainingtraining
  • Introduction to RNA-Seq: From quality control to pathway analysis

    21 - 22 October 2019

    Basel, Switzerland

    Elixir node event
    Introduction to RNA-Seq: From quality control to pathway analysis https://tess.elixir-europe.org/events/introduction-to-rna-seq-9b1ad1ee-b319-4f6e-bdeb-6b6a297145b2 Overview This two-day course will present the theory and bioinformatics tools required to analyze RNA-seq gene expression data, from the raw data to the biological interpretation. 2019-10-21 09:00:00 UTC 2019-10-22 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Best practices in programming 2019

    5 - 6 November 2019

    Basel, Switzerland

    Elixir node event
    Best practices in programming 2019 https://tess.elixir-europe.org/events/best-practices-in-programming-2019 This workshop is organised by the SIB PhD Training Network. Priority is given to its members, but is open to everyone. 2019-11-05 09:00:00 UTC 2019-11-06 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • NBIS Course: R programming for Life Scientists

    11 - 16 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: R programming for Life Scientists https://tess.elixir-europe.org/events/nbis-course-pre-r-programming-for-life-scientists More information will follow contact: education@nbis.se 2019-11-11 09:00:00 UTC 2019-11-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • NBIS Course: R programming for Life Scientists

    11 - 16 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: R programming for Life Scientists https://tess.elixir-europe.org/events/nbis-course-r-programming-for-life-scientists #training #url: https://nbisweden.github.io/workshop-r-1911/ 2019-11-11 - 2019-11-15, Course | Uppsala R programming foundations for Life Science Links: Course: https://nbisweden.github.io/workshop-r-1911/ Registration form: https://squery.typeform.com/to/XMwVk1  The course covers fundamental concepts of programming and software design focusing on programming in R. We will go through various aspects of R scripting emphasizing the parts useful for life scientists. After introductory lectures on good programming practices, basic software design theory and a brief overview of R, we will delve into programming. We will give you tools to access help and information on R-related challenges and issues, spend some time learning how to install external packages, how to find bugs and address common installation issues. The course will be given by experienced computational biologists from SciLifeLab and Uppsala University. Important dates:  application deadline -- October 20,  acceptance notification — October 25. contact: education@nbis.se 2019-11-11 09:00:00 UTC 2019-11-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • NBIS Course: R programming for Life Scientists

    11 - 16 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: R programming for Life Scientists https://tess.elixir-europe.org/events/nbis-course-r-programming-for-life-scientists-0f47ae33-6003-48ab-b642-c11efbe7fd19 #training #url: https://www.scilifelab.se/events/r-foundations-for-life-scientists/  #url: https://nbisweden.github.io/workshop-r-1911/ 2019-11-11 - 2019-11-15, Course | Uppsala R programming foundations for Life Science Links: Course: https://nbisweden.github.io/workshop-r-1911/ Registration form: https://squery.typeform.com/to/XMwVk1  The course covers fundamental concepts of programming and software design focusing on programming in R. We will go through various aspects of R scripting emphasizing the parts useful for life scientists. After introductory lectures on good programming practices, basic software design theory and a brief overview of R, we will delve into programming. We will give you tools to access help and information on R-related challenges and issues, spend some time learning how to install external packages, how to find bugs and address common installation issues. The course will be given by experienced computational biologists from SciLifeLab and Uppsala University. Important dates:  application deadline -- October 20,  acceptance notification — October 25. contact: education@nbis.se 2019-11-11 09:00:00 UTC 2019-11-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • Ligand-protein docking, and computer-aided drug design

    12 - 14 November 2019

    Basel, Switzerland

    Elixir node event
    Ligand-protein docking, and computer-aided drug design https://tess.elixir-europe.org/events/ligand-protein-docking-and-computer-aided-drug-design-b5c29e56-da43-431c-9283-e0ac2a452322 Overview This workshop aims to present basics on molecular visualization, ligand-protein docking and several computer-aided drug design tools developed at SIB. Numerous case examples are taken from different therapeutic fields. 2019-11-12 09:00:00 UTC 2019-11-14 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to high-performance computing (sciCORE cluster)

    12 November 2019

    Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-515184e9-a4a9-4bca-9273-7caa8f32769a Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2019-11-12 09:00:00 UTC 2019-11-12 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps in Parallelization with OpenMP

    19 November 2019

    Basel, Switzerland

    Elixir node event
    First Steps in Parallelization with OpenMP https://tess.elixir-europe.org/events/first-steps-in-parallelization-with-openmp-e0c0050d-f04e-42b5-a4ae-f1823d2f6f3c Overview We currently live in the era of multicore computers, where almost every computing machine has many CPUs. In order to benefit from this computational power we need to devise programs explicitly written for parallel machines. 2019-11-19 09:00:00 UTC 2019-11-19 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • NBIS Course: De novo Genome Assembly

    20 - 23 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: De novo Genome Assembly https://tess.elixir-europe.org/events/nbis-course-prel-de-novo-genome-assembly More information will follow, see https://www.scilifelab.se/education/courses%26training for questions: education@nbis.se 2019-11-20 09:00:00 UTC 2019-11-23 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Python for Life Scientists - along PharmaPy conference

    21 November 2019

    Basel, Switzerland

    Elixir node event
    Python for Life Scientists - along PharmaPy conference https://tess.elixir-europe.org/events/python-for-life-scientists-4b472965-66f4-419e-a282-bc20f5664411 More information soon We were obliged to cancel the 3-day course in Python, initially planned for 18-20 November 2019, and we apologize for this inconvenience. 2019-11-21 09:00:00 UTC 2019-11-21 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to the LabKey data management tool

    22 November 2019

    Basel, Switzerland

    Elixir node event
    Introduction to the LabKey data management tool https://tess.elixir-europe.org/events/introduction-to-the-labkey-data-management-tool-ebab7a0f-a73c-4791-be1e-b4e35055bcaa Overview LabKey is a data management platform in which researchers can collaboratively manage and analyze their data. LabKey Server is ideal for groups looking to transition to a more robust solution when working in Excel becomes unmanageable. 2019-11-22 09:00:00 UTC 2019-11-22 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
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